Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS15AP39 Gene

Aliases for RPS15AP39 Gene

  • Ribosomal Protein S15a Pseudogene 39 2 3
  • RPS15A_14_1774 3
  • AL353691.1 5

External Ids for RPS15AP39 Gene

Previous GeneCards Identifiers for RPS15AP39 Gene

  • GC0XP041494
  • GC0XP041608

Summaries for RPS15AP39 Gene

GeneCards Summary for RPS15AP39 Gene

RPS15AP39 (Ribosomal Protein S15a Pseudogene 39) is a Pseudogene.

Additional gene information for RPS15AP39 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP39 Gene

Genomics for RPS15AP39 Gene

GeneHancer (GH) Regulatory Elements for RPS15AP39 Gene

Promoters and enhancers for RPS15AP39 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI041733 Enhancer 0.8 ENCODE 0.4 -13.8 -13753 0.9 CTCF PKNOX1 RB1 BACH1 EBF1 BMI1 BATF IRF4 RAD21 RELA RPS15AP39 GPR82 CASK
GH0XI041736 Enhancer 0.5 ENCODE 0.4 -11.1 -11077 0.7 MEIS2 ATF1 MAX CBFA2T3 CREM CASK RPS15AP39 GPR82
GH0XI041735 Enhancer 0.2 FANTOM5 0.4 -12.7 -12662 0.1 RPS15AP39 GPR82 CASK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS15AP39 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS15AP39 Gene

Genomic Locations for RPS15AP39 Gene
chrX:41,748,183-41,748,665
(GRCh38/hg38)
Size:
483 bases
Orientation:
Plus strand
chrX:41,607,436-41,607,918
(GRCh37/hg19)

Genomic View for RPS15AP39 Gene

Genes around RPS15AP39 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP39 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP39 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP39 Gene

Proteins for RPS15AP39 Gene

Post-translational modifications for RPS15AP39 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP39 Gene

Domains & Families for RPS15AP39 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP39 Gene

Function for RPS15AP39 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP39 Gene

Localization for RPS15AP39 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP39 Gene

Pathways & Interactions for RPS15AP39 Gene

SuperPathways for RPS15AP39 Gene

No Data Available

Interacting Proteins for RPS15AP39 Gene

Gene Ontology (GO) - Biological Process for RPS15AP39 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP39 Gene

Drugs & Compounds for RPS15AP39 Gene

No Compound Related Data Available

Transcripts for RPS15AP39 Gene

mRNA/cDNA for RPS15AP39 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP39 Gene

No ASD Table

Relevant External Links for RPS15AP39 Gene

GeneLoc Exon Structure for
RPS15AP39
ECgene alternative splicing isoforms for
RPS15AP39

Expression for RPS15AP39 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP39 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP39 Gene:

RPS15AP39
genes like me logo Genes that share expression patterns with RPS15AP39: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP39 Gene

Orthologs for RPS15AP39 Gene

Evolution for RPS15AP39 Gene

ENSEMBL:
Gene Tree for RPS15AP39 (if available)
TreeFam:
Gene Tree for RPS15AP39 (if available)

No data available for Orthologs for RPS15AP39 Gene

Paralogs for RPS15AP39 Gene

No data available for Paralogs for RPS15AP39 Gene

Variants for RPS15AP39 Gene

Additional Variant Information for RPS15AP39 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP39

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP39 Gene

Disorders for RPS15AP39 Gene

Additional Disease Information for RPS15AP39

Genetic Association Database
(GAD)

No disorders were found for RPS15AP39 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS15AP39 Gene

Publications for RPS15AP39 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS15AP39 Gene

Sources for RPS15AP39 Gene

Content
Loading form....