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Aliases for RPS15AP38 Gene

Aliases for RPS15AP38 Gene

  • Ribosomal Protein S15a Pseudogene 38 2 3 5
  • RPS15A_25_1749 3

External Ids for RPS15AP38 Gene

Previous GeneCards Identifiers for RPS15AP38 Gene

  • GC22U900530
  • GC22M036818

Summaries for RPS15AP38 Gene

GeneCards Summary for RPS15AP38 Gene

RPS15AP38 (Ribosomal Protein S15a Pseudogene 38) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP38 Gene

Genomics for RPS15AP38 Gene

Regulatory Elements for RPS15AP38 Gene

Enhancers for RPS15AP38 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F036321 1.8 FANTOM5 Ensembl ENCODE 20.2 +88.1 88078 24.5 HDGF PKNOX1 CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 RPS15AP38 TXN2 ENSG00000252225 EIF3D IFT27 APOL3 GC22M036334 GC22P036326
GH22F037290 1.1 ENCODE 28.5 -869.1 -869053 0.7 PKNOX1 MLX CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 RPS15AP38 LL22NC01-81G9.3 ENSG00000229971 TEX33 MPST CYTH4 GC22M037293
GH22F035834 1.1 ENCODE 18.5 +583.9 583904 7.4 PKNOX1 SIN3A FEZF1 GLI4 ZNF2 YY1 GLIS2 KLF7 SP3 YY2 HMGXB4 RPS15AP38 APOL6 MB PIR58099 GC22P035827
GH22F035525 1 ENCODE 18.7 +895.7 895733 1.6 HDGF ZFP64 ZNF493 ARID4B YY1 KLF7 ZNF263 SP5 REST ZNF518A HMGXB4 RPS15AP38 MB RASD2 ENSG00000273044 LOC100131536
GH22F036422 1.6 FANTOM5 Ensembl ENCODE 11.4 -3.4 -3383 5.3 PKNOX1 ATF1 ARID4B DMAP1 ZNF48 ZNF121 GLIS2 GATA2 FOS SP5 FOXRED2 RPS15AP38 TXN2 IFT27 ENSG00000252225
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS15AP38 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS15AP38 Gene

Chromosome:
22
Start:
36,421,230 bp from pter
End:
36,421,661 bp from pter
Size:
432 bases
Orientation:
Minus strand

Genomic View for RPS15AP38 Gene

Genes around RPS15AP38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP38 Gene

Proteins for RPS15AP38 Gene

Post-translational modifications for RPS15AP38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP38 Gene

Domains & Families for RPS15AP38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP38 Gene

Function for RPS15AP38 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP38 Gene

Localization for RPS15AP38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS15AP38 Gene

Pathways & Interactions for RPS15AP38 Gene

SuperPathways for RPS15AP38 Gene

No Data Available

Interacting Proteins for RPS15AP38 Gene

Gene Ontology (GO) - Biological Process for RPS15AP38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP38 Gene

Transcripts for RPS15AP38 Gene

mRNA/cDNA for RPS15AP38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP38 Gene

No ASD Table

Relevant External Links for RPS15AP38 Gene

GeneLoc Exon Structure for
RPS15AP38
ECgene alternative splicing isoforms for
RPS15AP38

Expression for RPS15AP38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS15AP38 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP38 Gene:

RPS15AP38
genes like me logo Genes that share expression patterns with RPS15AP38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS15AP38 Gene

Orthologs for RPS15AP38 Gene

Evolution for RPS15AP38 Gene

ENSEMBL:
Gene Tree for RPS15AP38 (if available)
TreeFam:
Gene Tree for RPS15AP38 (if available)

No data available for Orthologs for RPS15AP38 Gene

Paralogs for RPS15AP38 Gene

No data available for Paralogs for RPS15AP38 Gene

Variants for RPS15AP38 Gene

Relevant External Links for RPS15AP38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP38 Gene

Disorders for RPS15AP38 Gene

No disorders were found for RPS15AP38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP38 Gene

Publications for RPS15AP38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS15AP38 Gene

Sources for RPS15AP38 Gene

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