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Aliases for RPS15AP33 Gene

Subcategory (RNA class) for RPS15AP33 Gene

lncRNA

Aliases for RPS15AP33 Gene

  • Ribosomal Protein S15a Pseudogene 33 2 3
  • RPS15A_21_1479 3
  • AC145285.1 5

External Ids for RPS15AP33 Gene

ORGUL Members for RPS15AP33 Gene

Previous GeneCards Identifiers for RPS15AP33 Gene

  • GC16U900939
  • GC16M028826

Summaries for RPS15AP33 Gene

GeneCards Summary for RPS15AP33 Gene

RPS15AP33 (Ribosomal Protein S15a Pseudogene 33) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS15AP33 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP33 Gene

Genomics for RPS15AP33 Gene

Regulatory Elements for RPS15AP33 Gene

Enhancers for RPS15AP33 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H029258 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.4 -450.0 -449955 11 HDGF PKNOX1 ATF1 FOXA2 MLX ARID4B SIN3A YBX1 TCF12 FOS SPNS1 ATXN2L NPIPB9 ENSG00000260853 ENSG00000260367 ENSG00000260953 NPIPB10P SMG1P2 NFATC2IP NPIPB8
GH16H029273 1.8 FANTOM5 Ensembl ENCODE dbSUPER 12.1 -459.2 -459228 0 HDGF PKNOX1 FOXA2 ARNT YBX1 ZBTB7B TCF12 ZNF207 FOS ATF7 NPIPB12 ENSG00000260853 ATXN2L INO80E NPIPB13 SPNS1 ENSG00000261766 ENSG00000260796 NFATC2IP ENSG00000198106
GH16H028209 1.4 ENCODE dbSUPER 12.3 +603.1 603071 3 HDGF PKNOX1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SH2B1 ATXN2L ENSG00000261766 NPIPB9 ENSG00000260853 SPNS1 NFATC2IP ENSG00000260367 RPS15AP33 SGF29
GH16H028844 1.2 ENCODE 11.7 -31.5 -31530 2 HDGF FOXA2 PKNOX1 ARID4B SIN3A DMAP1 ZBTB7B YY1 SLC30A9 ZNF766 TUFM ATXN2L NFATC2IP SPNS1 ENSG00000260853 SMG1P2 NPIPB10P ENSG00000260367 NPIPB12 PRRT2
GH16H028973 1.2 ENCODE 11.5 -160.0 -160049 2 FOXA2 PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ENSG00000261766 ATXN2L NPIPB12 NFATC2IP ENSG00000260853 SPNS1 CDIPT SULT1A2 ENSG00000247735 NPIPB9
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS15AP33 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS15AP33 Gene

Chromosome:
16
Start:
28,813,942 bp from pter
End:
28,814,673 bp from pter
Size:
732 bases
Orientation:
Minus strand

Genomic View for RPS15AP33 Gene

Genes around RPS15AP33 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP33 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP33 Gene

Proteins for RPS15AP33 Gene

Post-translational modifications for RPS15AP33 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP33 Gene

Domains & Families for RPS15AP33 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP33 Gene

Function for RPS15AP33 Gene

Phenotypes From GWAS Catalog for RPS15AP33 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS15AP33
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP33 Gene

Localization for RPS15AP33 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP33 Gene

Pathways & Interactions for RPS15AP33 Gene

SuperPathways for RPS15AP33 Gene

No Data Available

Interacting Proteins for RPS15AP33 Gene

Gene Ontology (GO) - Biological Process for RPS15AP33 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP33 Gene

Drugs & Compounds for RPS15AP33 Gene

No Compound Related Data Available

Transcripts for RPS15AP33 Gene

mRNA/cDNA for RPS15AP33 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS15AP33
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP33 Gene

No ASD Table

Relevant External Links for RPS15AP33 Gene

GeneLoc Exon Structure for
RPS15AP33
ECgene alternative splicing isoforms for
RPS15AP33

Expression for RPS15AP33 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP33 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP33 Gene:

RPS15AP33
genes like me logo Genes that share expression patterns with RPS15AP33: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP33 Gene

Orthologs for RPS15AP33 Gene

Evolution for RPS15AP33 Gene

ENSEMBL:
Gene Tree for RPS15AP33 (if available)
TreeFam:
Gene Tree for RPS15AP33 (if available)

No data available for Orthologs for RPS15AP33 Gene

Paralogs for RPS15AP33 Gene

No data available for Paralogs for RPS15AP33 Gene

Variants for RPS15AP33 Gene

Relevant External Links for RPS15AP33 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP33 Gene

Disorders for RPS15AP33 Gene

No disorders were found for RPS15AP33 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP33 Gene

Publications for RPS15AP33 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS15AP33 Gene

Sources for RPS15AP33 Gene

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