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Aliases for RPS15AP28 Gene

Aliases for RPS15AP28 Gene

  • Ribosomal Protein S15a Pseudogene 28 2 3 5
  • RPS15A_16_1058 3

External Ids for RPS15AP28 Gene

Previous GeneCards Identifiers for RPS15AP28 Gene

  • GC10M070732
  • GC10M071061

Summaries for RPS15AP28 Gene

GeneCards Summary for RPS15AP28 Gene

RPS15AP28 (Ribosomal Protein S15a Pseudogene 28) is a Pseudogene.

Additional gene information for RPS15AP28 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP28 Gene

Genomics for RPS15AP28 Gene

Regulatory Elements for RPS15AP28 Gene

Enhancers for RPS15AP28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H069315 1.7 FANTOM5 ENCODE dbSUPER 0.4 -17.9 -17851 7 HDGF PKNOX1 FOXA2 ARNT SIN3A ZNF2 ZNF207 FOS SP3 JUNB DDX50 HK1 TYSND1 CCAR1 HNRNPH3 DDX21 ENSG00000231748 HKDC1 SAR1A FAM241B
GH10H069325 1.5 Ensembl ENCODE dbSUPER 0.3 -32.6 -32555 16 HDGF PKNOX1 ATF1 ARNT SIN3A ZNF2 ETS1 TCF12 GLIS2 GATA2 CCAR1 DDX50 SAR1A HK1 RPL26P27 MIR1254-1 ENSG00000231748 TYSND1 DDX21 STOX1
GH10H069311 1 ENCODE dbSUPER 0.4 -10.6 -10554 0 BCOR HDAC1 ARNT TAL1 PYGO2 CCNT2 TCF12 CTBP1 GATA2 NCOR1 RPS15AP28 TACR2
GH10H069314 0.8 ENCODE 0.4 -12.3 -12308 0 HDAC1 HDGF CTCF PKNOX1 TBL1XR1 ARNT TAL1 CEBPG CC2D1A CTBP1 HK1 ENSG00000231748 HKDC1 FAM241B RPS15AP28 TACR2
GH10H069313 0.7 ENCODE dbSUPER 0.4 -13.1 -13146 0 CTBP1 ZEB2 HK1 ENSG00000231748 HKDC1 FAM241B RPS15AP28 TACR2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS15AP28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS15AP28 Gene

Chromosome:
10
Start:
69,300,393 bp from pter
End:
69,300,847 bp from pter
Size:
455 bases
Orientation:
Minus strand

Genomic View for RPS15AP28 Gene

Genes around RPS15AP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP28 Gene

Proteins for RPS15AP28 Gene

Post-translational modifications for RPS15AP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP28 Gene

Domains & Families for RPS15AP28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP28 Gene

Function for RPS15AP28 Gene

Phenotypes From GWAS Catalog for RPS15AP28 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS15AP28
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP28 Gene

Localization for RPS15AP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP28 Gene

Pathways & Interactions for RPS15AP28 Gene

SuperPathways for RPS15AP28 Gene

No Data Available

Interacting Proteins for RPS15AP28 Gene

Gene Ontology (GO) - Biological Process for RPS15AP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP28 Gene

Drugs & Compounds for RPS15AP28 Gene

No Compound Related Data Available

Transcripts for RPS15AP28 Gene

mRNA/cDNA for RPS15AP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS15AP28
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP28 Gene

No ASD Table

Relevant External Links for RPS15AP28 Gene

GeneLoc Exon Structure for
RPS15AP28
ECgene alternative splicing isoforms for
RPS15AP28

Expression for RPS15AP28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP28 Gene

mRNA differential expression in normal tissues according to GTEx for RPS15AP28 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP28 Gene:

RPS15AP28
genes like me logo Genes that share expression patterns with RPS15AP28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP28 Gene

Orthologs for RPS15AP28 Gene

Evolution for RPS15AP28 Gene

ENSEMBL:
Gene Tree for RPS15AP28 (if available)
TreeFam:
Gene Tree for RPS15AP28 (if available)

No data available for Orthologs for RPS15AP28 Gene

Paralogs for RPS15AP28 Gene

No data available for Paralogs for RPS15AP28 Gene

Variants for RPS15AP28 Gene

Relevant External Links for RPS15AP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP28 Gene

Disorders for RPS15AP28 Gene

No disorders were found for RPS15AP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP28 Gene

Publications for RPS15AP28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS15AP28 Gene

Sources for RPS15AP28 Gene

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