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Aliases for RPS15AP23 Gene

Subcategory (RNA class) for RPS15AP23 Gene

antisense

Aliases for RPS15AP23 Gene

  • Ribosomal Protein S15a Pseudogene 23 2 3
  • RPS15A_12_849 3
  • AC083875.1 5

External Ids for RPS15AP23 Gene

ORGUL Members for RPS15AP23 Gene

Previous GeneCards Identifiers for RPS15AP23 Gene

  • GC07U902614
  • GC07M133000

Summaries for RPS15AP23 Gene

GeneCards Summary for RPS15AP23 Gene

RPS15AP23 (Ribosomal Protein S15a Pseudogene 23) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPS15AP23 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP23 Gene

Genomics for RPS15AP23 Gene

GeneHancer (GH) Regulatory Elements for RPS15AP23 Gene

Promoters and enhancers for RPS15AP23 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I133310 Enhancer 0.5 ENCODE 0.8 +4.8 4831 0.2 OSR2 NFIC NFIB MZF1 RPS15AP23 MIR6133 EXOC4
GH07I133354 Enhancer 1 Ensembl ENCODE 0.3 -40.2 -40152 2.3 HDAC1 PKNOX1 USF1 TEAD4 BACH1 CEBPG ZBTB40 ZFHX2 CTBP1 ZNF766 RPS15AP23 EXOC4 GC07P133674
GH07I133364 Enhancer 0.6 Ensembl ENCODE 0.2 -50.0 -50037 1.6 CTCF MEF2D JUN LRGUK RPS15AP23 EXOC4 GC07P133674
GH07I133409 Enhancer 0.6 FANTOM5 0.2 -92.9 -92856 0.2 ZBTB6 YY2 NEUROD1 YBX1 ZNF645 ZNF747 ZNF416 ZNF580 ZNF207 CREB1 EXOC4 RPS15AP23 GC07P133674
GH07I133492 Enhancer 1.2 ENCODE dbSUPER 0.1 -176.9 -176919 0.1 ATF1 FEZF1 ZNF2 ZNF121 GLIS2 ZNF213 KLF7 FOS ATF7 KLF13 SLC35B4 LRGUK RPS15AP23 GC07P133674 EXOC4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS15AP23 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS15AP23 Gene

Genomic Locations for RPS15AP23 Gene
chr7:133,315,009-133,315,413
(GRCh38/hg38)
Size:
405 bases
Orientation:
Minus strand
chr7:132,999,763-133,000,167
(GRCh37/hg19)

Genomic View for RPS15AP23 Gene

Genes around RPS15AP23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP23 Gene

Proteins for RPS15AP23 Gene

Post-translational modifications for RPS15AP23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP23 Gene

Domains & Families for RPS15AP23 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP23 Gene

Function for RPS15AP23 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP23 Gene

Localization for RPS15AP23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP23 Gene

Pathways & Interactions for RPS15AP23 Gene

SuperPathways for RPS15AP23 Gene

No Data Available

Interacting Proteins for RPS15AP23 Gene

Gene Ontology (GO) - Biological Process for RPS15AP23 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP23 Gene

Drugs & Compounds for RPS15AP23 Gene

No Compound Related Data Available

Transcripts for RPS15AP23 Gene

mRNA/cDNA for RPS15AP23 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP23 Gene

No ASD Table

Relevant External Links for RPS15AP23 Gene

GeneLoc Exon Structure for
RPS15AP23
ECgene alternative splicing isoforms for
RPS15AP23

Expression for RPS15AP23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP23 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP23 Gene:

RPS15AP23
genes like me logo Genes that share expression patterns with RPS15AP23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP23 Gene

Orthologs for RPS15AP23 Gene

Evolution for RPS15AP23 Gene

ENSEMBL:
Gene Tree for RPS15AP23 (if available)
TreeFam:
Gene Tree for RPS15AP23 (if available)

No data available for Orthologs for RPS15AP23 Gene

Paralogs for RPS15AP23 Gene

No data available for Paralogs for RPS15AP23 Gene

Variants for RPS15AP23 Gene

Additional Variant Information for RPS15AP23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP23 Gene

Disorders for RPS15AP23 Gene

No disorders were found for RPS15AP23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP23 Gene

Publications for RPS15AP23 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS15AP23 Gene

Sources for RPS15AP23 Gene

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