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Aliases for RPS15AP16 Gene

Subcategory (RNA class) for RPS15AP16 Gene

antisense

Aliases for RPS15AP16 Gene

  • Ribosomal Protein S15a Pseudogene 16 2 3 5
  • RPS15A_7_402 3

External Ids for RPS15AP16 Gene

ORGUL Members for RPS15AP16 Gene

Previous GeneCards Identifiers for RPS15AP16 Gene

  • GC03U901184
  • GC03M128518
  • GC03M125906

Summaries for RPS15AP16 Gene

GeneCards Summary for RPS15AP16 Gene

RPS15AP16 (Ribosomal Protein S15a Pseudogene 16) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP16 Gene

Genomics for RPS15AP16 Gene

Regulatory Elements for RPS15AP16 Gene

Enhancers for RPS15AP16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G128679 1.4 ENCODE dbSUPER 10.7 +118.4 118419 2.9 HDGF PKNOX1 MLX ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ENSG00000244932 POU5F1P6 RPL32P3 ISY1 H1FX RPS15AP16 RPN1
GH03G128793 1.3 Ensembl ENCODE dbSUPER 0.7 +4.7 4723 2.3 CTCF TBL1XR1 SAP130 WRNIP1 ARID4B SIN3A EBF1 RAD21 RFX5 YY1 LOC653712 ENSG00000207130 ENSG00000250796 RAB7A ACAD9 RPS15AP16 RN7SL698P
GH03G128801 1.4 Ensembl ENCODE dbSUPER 0.4 -5.4 -5355 5.6 YBX3 HDAC1 TBP PKNOX1 ATF1 TBL1XR1 SIN3A ZBTB40 CBX5 ZSCAN5C LOC653712 ENSG00000250796 ENSG00000207130 ENSG00000261159 RAB7A ACAD9 RPS15AP16 PIR59714
GH03G128785 1.4 Ensembl ENCODE dbSUPER 0.4 +10.9 10935 5.0 PKNOX1 SIN3A BRCA1 GLIS2 FOS DEK NFYC ZHX2 ZNF592 ZNF579 ENSG00000250796 LOC653712 ENSG00000207130 ACAD9 RAB7A RN7SL698P RPS15AP16
GH03G128812 1.4 Ensembl ENCODE dbSUPER 0.4 -15.1 -15064 3.7 HDAC1 ATF1 PKNOX1 TBL1XR1 ARNT TCF12 GATA2 ELK1 EGR1 SCRT2 LOC653712 ACAD9 RAB7A ENSG00000250796 ENSG00000207130 PIR59714 RPS15AP16
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS15AP16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS15AP16 Gene

Chromosome:
3
Start:
128,798,841 bp from pter
End:
128,799,235 bp from pter
Size:
395 bases
Orientation:
Minus strand

Genomic View for RPS15AP16 Gene

Genes around RPS15AP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP16 Gene

Proteins for RPS15AP16 Gene

Post-translational modifications for RPS15AP16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP16 Gene

Domains & Families for RPS15AP16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP16 Gene

Function for RPS15AP16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP16 Gene

Localization for RPS15AP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS15AP16 Gene

Pathways & Interactions for RPS15AP16 Gene

SuperPathways for RPS15AP16 Gene

No Data Available

Interacting Proteins for RPS15AP16 Gene

Gene Ontology (GO) - Biological Process for RPS15AP16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP16 Gene

Drugs & Compounds for RPS15AP16 Gene

No Compound Related Data Available

Transcripts for RPS15AP16 Gene

mRNA/cDNA for RPS15AP16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP16 Gene

No ASD Table

Relevant External Links for RPS15AP16 Gene

GeneLoc Exon Structure for
RPS15AP16
ECgene alternative splicing isoforms for
RPS15AP16

Expression for RPS15AP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP16 Gene:

RPS15AP16
genes like me logo Genes that share expression patterns with RPS15AP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP16 Gene

Orthologs for RPS15AP16 Gene

Evolution for RPS15AP16 Gene

ENSEMBL:
Gene Tree for RPS15AP16 (if available)
TreeFam:
Gene Tree for RPS15AP16 (if available)

No data available for Orthologs for RPS15AP16 Gene

Paralogs for RPS15AP16 Gene

No data available for Paralogs for RPS15AP16 Gene

Variants for RPS15AP16 Gene

Relevant External Links for RPS15AP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP16 Gene

Disorders for RPS15AP16 Gene

No disorders were found for RPS15AP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP16 Gene

Publications for RPS15AP16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS15AP16 Gene

Sources for RPS15AP16 Gene

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