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Aliases for RPS15AP16 Gene

Subcategory (RNA class) for RPS15AP16 Gene

antisense

Aliases for RPS15AP16 Gene

  • Ribosomal Protein S15a Pseudogene 16 2 3 5
  • RPS15A_7_402 3

External Ids for RPS15AP16 Gene

ORGUL Members for RPS15AP16 Gene

Previous GeneCards Identifiers for RPS15AP16 Gene

  • GC03U901184
  • GC03M128518
  • GC03M125906

Summaries for RPS15AP16 Gene

GeneCards Summary for RPS15AP16 Gene

RPS15AP16 (Ribosomal Protein S15a Pseudogene 16) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP16 Gene

Genomics for RPS15AP16 Gene

Regulatory Elements for RPS15AP16 Gene

Enhancers for RPS15AP16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F127888 1.5 FANTOM5 Ensembl ENCODE 11.2 +909.4 909350 3.2 PKNOX1 FEZF1 CBX5 ZNF143 FOS SP3 YY2 JUNB REST TSHZ1 EEFSEC KBTBD12 RUVBL1 RPS15AP16 RPN1 PODXL2 SEC61A1 GC03P127885 GC03P127895
GH03F129159 1.2 ENCODE 12.9 -362.3 -362319 4.4 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC TBX21 H1FX-AS1 RPL32P3 ISY1 RPS15AP16 ENSG00000244932 ENSG00000273437
GH03F129438 1.2 ENCODE 12.9 -641.5 -641488 4.5 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 RPL32P3 H1FX-AS1 ISY1 PLXND1 RPS15AP16 IFT122 RHO MBD4 GC03P129485 GC03P129487
GH03F128778 1.3 Ensembl ENCODE 11.5 +12.0 12005 16.9 PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A BRCA1 ZNF2 YY1 GLIS2 FOS RPL32P3 ENSG00000244932 ISY1 EEFSEC LOC653712 H1FX-AS1 IFT122 ENSG00000250796 ENSG00000207130 RAB7A
GH03F129556 1.3 Ensembl ENCODE 11.2 -760.4 -760417 6.6 HDGF ATF1 PKNOX1 ARID4B SIN3A ZNF2 ZNF48 YY1 ZNF121 GLIS2 RPL32P3 ENSG00000244932 ISY1 PLXND1 RHO RPS15AP16 RPN1 MBD4 ENSG00000203644 IFT122
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS15AP16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS15AP16 Gene

Chromosome:
3
Start:
128,798,841 bp from pter
End:
128,799,235 bp from pter
Size:
395 bases
Orientation:
Minus strand

Genomic View for RPS15AP16 Gene

Genes around RPS15AP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP16 Gene

Proteins for RPS15AP16 Gene

Post-translational modifications for RPS15AP16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP16 Gene

Domains & Families for RPS15AP16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP16 Gene

Function for RPS15AP16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP16 Gene

Localization for RPS15AP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS15AP16 Gene

Pathways & Interactions for RPS15AP16 Gene

SuperPathways for RPS15AP16 Gene

No Data Available

Interacting Proteins for RPS15AP16 Gene

Gene Ontology (GO) - Biological Process for RPS15AP16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP16 Gene

Transcripts for RPS15AP16 Gene

mRNA/cDNA for RPS15AP16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP16 Gene

No ASD Table

Relevant External Links for RPS15AP16 Gene

GeneLoc Exon Structure for
RPS15AP16
ECgene alternative splicing isoforms for
RPS15AP16

Expression for RPS15AP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS15AP16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP16 Gene:

RPS15AP16
genes like me logo Genes that share expression patterns with RPS15AP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS15AP16 Gene

Orthologs for RPS15AP16 Gene

Evolution for RPS15AP16 Gene

ENSEMBL:
Gene Tree for RPS15AP16 (if available)
TreeFam:
Gene Tree for RPS15AP16 (if available)

No data available for Orthologs for RPS15AP16 Gene

Paralogs for RPS15AP16 Gene

No data available for Paralogs for RPS15AP16 Gene

Variants for RPS15AP16 Gene

Relevant External Links for RPS15AP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP16 Gene

Disorders for RPS15AP16 Gene

No disorders were found for RPS15AP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP16 Gene

Publications for RPS15AP16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS15AP16 Gene

Sources for RPS15AP16 Gene

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