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Aliases for RPS15AP16 Gene

Subcategory (RNA class) for RPS15AP16 Gene

antisense

Aliases for RPS15AP16 Gene

  • Ribosomal Protein S15a Pseudogene 16 2 3
  • RPS15A_7_402 3

External Ids for RPS15AP16 Gene

ORGUL Members for RPS15AP16 Gene

Previous GeneCards Identifiers for RPS15AP16 Gene

  • GC03U901184
  • GC03M128518
  • GC03M125906

Summaries for RPS15AP16 Gene

GeneCards Summary for RPS15AP16 Gene

RPS15AP16 (Ribosomal Protein S15a Pseudogene 16) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPS15AP16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP16 Gene

Genomics for RPS15AP16 Gene

GeneHancer (GH) Regulatory Elements for RPS15AP16 Gene

Promoters and enhancers for RPS15AP16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I128800 Enhancer 0.5 ENCODE dbSUPER 550.8 -1.4 -1438 0.2 JUNB RPS15AP16 ENSG00000250796 LOC653712 ENSG00000207130 RAB7A PIR59714
GH03I128798 Enhancer 0.4 dbSUPER 550.8 -0.2 -173 1.2 JUNB IKZF2 RUNX3 RPS15AP16 RPN1 LOC653712 ENSG00000250796 ENSG00000207130 RAB7A PIR59714
GH03I128802 Enhancer 0.4 ENCODE dbSUPER 550.8 -1.7 -1718 0.2 RPS15AP16 ENSG00000250796 LOC653712 ENSG00000207130 PIR59714 RAB7A
GH03I128796 Enhancer 0.2 dbSUPER 550.8 +1.8 1840 1.7 RPS15AP16 RPN1 ENSG00000207130 ACAD9 RAB7A RN7SL698P
GH03I129178 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.5 -383.3 -383309 8.4 PKNOX1 SMAD1 FOXA2 MLX ZFP64 ARID4B NEUROD1 SIN3A FEZF1 DMAP1 CNBP LOC105374101 ENSG00000244932 RPL32P3 ISY1 MBD4 RPS15AP16 H1FX H1FX-AS1 COPG1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS15AP16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS15AP16 Gene

Genomic Locations for RPS15AP16 Gene
chr3:128,798,841-128,799,235
(GRCh38/hg38)
Size:
395 bases
Orientation:
Minus strand
chr3:128,517,683-128,518,044
(GRCh37/hg19)

Genomic View for RPS15AP16 Gene

Genes around RPS15AP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP16 Gene

Proteins for RPS15AP16 Gene

Post-translational modifications for RPS15AP16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP16 Gene

Domains & Families for RPS15AP16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP16 Gene

Function for RPS15AP16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP16 Gene

Localization for RPS15AP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP16 Gene

Pathways & Interactions for RPS15AP16 Gene

SuperPathways for RPS15AP16 Gene

No Data Available

Interacting Proteins for RPS15AP16 Gene

Gene Ontology (GO) - Biological Process for RPS15AP16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP16 Gene

Drugs & Compounds for RPS15AP16 Gene

No Compound Related Data Available

Transcripts for RPS15AP16 Gene

mRNA/cDNA for RPS15AP16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP16 Gene

No ASD Table

Relevant External Links for RPS15AP16 Gene

GeneLoc Exon Structure for
RPS15AP16
ECgene alternative splicing isoforms for
RPS15AP16

Expression for RPS15AP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP16 Gene:

RPS15AP16
genes like me logo Genes that share expression patterns with RPS15AP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP16 Gene

Orthologs for RPS15AP16 Gene

Evolution for RPS15AP16 Gene

ENSEMBL:
Gene Tree for RPS15AP16 (if available)
TreeFam:
Gene Tree for RPS15AP16 (if available)

No data available for Orthologs for RPS15AP16 Gene

Paralogs for RPS15AP16 Gene

No data available for Paralogs for RPS15AP16 Gene

Variants for RPS15AP16 Gene

Additional Variant Information for RPS15AP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP16 Gene

Disorders for RPS15AP16 Gene

No disorders were found for RPS15AP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP16 Gene

Publications for RPS15AP16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS15AP16 Gene

Sources for RPS15AP16 Gene

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