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Aliases for RPS15AP11 Gene

Aliases for RPS15AP11 Gene

  • Ribosomal Protein S15a Pseudogene 11 2 3 5
  • RPS15A_3_41 3

External Ids for RPS15AP11 Gene

Previous GeneCards Identifiers for RPS15AP11 Gene

  • GC01M045009
  • GC01M045246

Summaries for RPS15AP11 Gene

GeneCards Summary for RPS15AP11 Gene

RPS15AP11 (Ribosomal Protein S15a Pseudogene 11) is a Pseudogene.

Additional gene information for RPS15AP11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP11 Gene

Genomics for RPS15AP11 Gene

Regulatory Elements for RPS15AP11 Gene

Enhancers for RPS15AP11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H044720 1.7 Ensembl ENCODE dbSUPER 11.6 +57.9 57942 4 MLX ZFP64 FEZF1 YBX1 YY1 ZNF143 SP3 NFYC ZC3H11A MEF2D TOE1 GPBP1L1 RPL7AP16 MUTYH HECTD3 RPS8 DMAP1 RPS15AP10 TMEM69 NASP
GH01H044783 1.1 Ensembl ENCODE 0.7 -3.7 -3662 1 ELF3 DRAP1 SAP130 MAX SIN3A ARID4B DMAP1 KMT2B RARA ETS1 BEST4 RPS15AP11
GH01H044785 1.3 Ensembl ENCODE 0.4 -5.8 -5755 1 HDGF ARID4B SIN3A DMAP1 ZNF2 ZNF121 GLIS2 ZNF143 ZHX2 MXD4 BEST4 RPS15AP11
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS15AP11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS15AP11 Gene

Chromosome:
1
Start:
44,780,285 bp from pter
End:
44,780,745 bp from pter
Size:
461 bases
Orientation:
Minus strand

Genomic View for RPS15AP11 Gene

Genes around RPS15AP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP11 Gene

Proteins for RPS15AP11 Gene

Post-translational modifications for RPS15AP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP11 Gene

Domains & Families for RPS15AP11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP11 Gene

Function for RPS15AP11 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS15AP11
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP11 Gene

Localization for RPS15AP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP11 Gene

Pathways & Interactions for RPS15AP11 Gene

SuperPathways for RPS15AP11 Gene

No Data Available

Interacting Proteins for RPS15AP11 Gene

Gene Ontology (GO) - Biological Process for RPS15AP11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP11 Gene

Drugs & Compounds for RPS15AP11 Gene

No Compound Related Data Available

Transcripts for RPS15AP11 Gene

mRNA/cDNA for RPS15AP11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS15AP11
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP11 Gene

No ASD Table

Relevant External Links for RPS15AP11 Gene

GeneLoc Exon Structure for
RPS15AP11
ECgene alternative splicing isoforms for
RPS15AP11

Expression for RPS15AP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP11 Gene

mRNA differential expression in normal tissues according to GTEx for RPS15AP11 Gene

This gene is overexpressed in Colon - Transverse (x11.6) and Brain - Cerebellar Hemisphere (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP11 Gene:

RPS15AP11
genes like me logo Genes that share expression patterns with RPS15AP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP11 Gene

Orthologs for RPS15AP11 Gene

Evolution for RPS15AP11 Gene

ENSEMBL:
Gene Tree for RPS15AP11 (if available)
TreeFam:
Gene Tree for RPS15AP11 (if available)

No data available for Orthologs for RPS15AP11 Gene

Paralogs for RPS15AP11 Gene

No data available for Paralogs for RPS15AP11 Gene

Variants for RPS15AP11 Gene

Relevant External Links for RPS15AP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP11 Gene

Disorders for RPS15AP11 Gene

No disorders were found for RPS15AP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP11 Gene

Publications for RPS15AP11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS15AP11 Gene

Sources for RPS15AP11 Gene

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