Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS15AP10 Gene

Subcategory (RNA class) for RPS15AP10 Gene


Aliases for RPS15AP10 Gene

  • Ribosomal Protein S15a Pseudogene 10 2 3 5
  • RPS15A_4_42 3

External Ids for RPS15AP10 Gene

ORGUL Members for RPS15AP10 Gene

Previous GeneCards Identifiers for RPS15AP10 Gene

  • GC01U902301
  • GC01M046111
  • GC01M044222

Summaries for RPS15AP10 Gene

GeneCards Summary for RPS15AP10 Gene

RPS15AP10 (Ribosomal Protein S15a Pseudogene 10) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS15AP10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP10 Gene

Genomics for RPS15AP10 Gene

GeneHancer (GH) Regulatory Elements for RPS15AP10 Gene

Promoters and enhancers for RPS15AP10 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I045647 Enhancer 0.5 Ensembl ENCODE 550.8 -1.0 -964 0.7 GABPA RPS15AP10 MAST2 GC01M045651 GPBP1L1
GH01I045645 Enhancer 0.4 FANTOM5 550.8 +0.5 500 0.4 PAF1 SCRT2 RPS15AP10 TMEM69 GPBP1L1 MAST2 GC01M045637
GH01I046129 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 31.6 -486.3 -486268 6.3 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 PIK3R3 LOC101929626 TOE1 GPBP1L1 LRRC41 RPL7AP16 EFCAB14-AS1 RPS15AP10 MOB3C TMEM69
GH01I044729 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 31.6 +915.3 915311 2.8 CLOCK FEZF1 YBX1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC MEF2D RNU5D-1 GC01M044732 GPBP1L1 TOE1 RPL7AP16 RPS8 HECTD3 RPS15AP10 NASP TMEM69
GH01I045749 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE 21.5 -104.6 -104569 3.1 HDGF PKNOX1 CLOCK FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 IPP LOC105378693 LRRC41 TOE1 GPBP1L1 HECTD3 CCDC163 RPL7AP16 MUTYH MAST2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS15AP10 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the RPS15AP10 gene promoter:

Genomic Locations for RPS15AP10 Gene

Genomic Locations for RPS15AP10 Gene
914 bases
Minus strand

Genomic View for RPS15AP10 Gene

Genes around RPS15AP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP10 Gene

Proteins for RPS15AP10 Gene

Post-translational modifications for RPS15AP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP10 Gene

Domains & Families for RPS15AP10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP10 Gene

Function for RPS15AP10 Gene

Phenotypes From GWAS Catalog for RPS15AP10 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP10 Gene

Localization for RPS15AP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP10 Gene

Pathways & Interactions for RPS15AP10 Gene

SuperPathways for RPS15AP10 Gene

No Data Available

Interacting Proteins for RPS15AP10 Gene

Gene Ontology (GO) - Biological Process for RPS15AP10 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS15AP10 Gene

Drugs & Compounds for RPS15AP10 Gene

No Compound Related Data Available

Transcripts for RPS15AP10 Gene

mRNA/cDNA for RPS15AP10 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPS15AP10 Gene

Ribosomal protein S15a pseudogene 10:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP10 Gene

No ASD Table

Relevant External Links for RPS15AP10 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS15AP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP10 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP10 Gene:


SOURCE GeneReport for Unigene cluster for RPS15AP10 Gene:

genes like me logo Genes that share expression patterns with RPS15AP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP10 Gene

Orthologs for RPS15AP10 Gene

Evolution for RPS15AP10 Gene

Gene Tree for RPS15AP10 (if available)
Gene Tree for RPS15AP10 (if available)

No data available for Orthologs for RPS15AP10 Gene

Paralogs for RPS15AP10 Gene

No data available for Paralogs for RPS15AP10 Gene

Variants for RPS15AP10 Gene

Sequence variations from dbSNP and Humsavar for RPS15AP10 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000288893 -- 45,646,015(-) C/T non_coding_transcript_variant
rs1000509784 -- 45,647,244(-) C/T upstream_transcript_variant
rs1001087630 -- 45,647,950(-) TTTTTTTTT/TTTTTTTTTT upstream_transcript_variant
rs1001296274 -- 45,646,490(-) T/C non_coding_transcript_variant
rs1002403748 -- 45,648,592(-) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for RPS15AP10 Gene

Variant ID Type Subtype PubMed ID
esv3893512 CNV gain 25118596
nsv1014128 CNV gain 25217958

Additional Variant Information for RPS15AP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPS15AP10 Gene

Disorders for RPS15AP10 Gene

Additional Disease Information for RPS15AP10

No disorders were found for RPS15AP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS15AP10 Gene

Publications for RPS15AP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS15AP10 Gene

Sources for RPS15AP10 Gene

Loading form....