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Aliases for RPS13P6 Gene

Aliases for RPS13P6 Gene

  • Ribosomal Protein S13 Pseudogene 6 2 3
  • CTD-2410N18.1 5
  • RPS13_4_614 3

External Ids for RPS13P6 Gene

Previous GeneCards Identifiers for RPS13P6 Gene

  • GC05U901098
  • GC05P133604

Summaries for RPS13P6 Gene

GeneCards Summary for RPS13P6 Gene

RPS13P6 (Ribosomal Protein S13 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS13P6 Gene

Genomics for RPS13P6 Gene

Regulatory Elements for RPS13P6 Gene

Enhancers for RPS13P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G134249 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.4 -17386 1.7 PKNOX1 ATF1 TCF12 ZNF766 GATA2 ELK1 SREBF1 SMARCA4 PBX2 NBN SKP1 SEC24A PPP2CA UBE2B RPS13P6 ENSG00000270177
GH05G134252 1.2 Ensembl ENCODE dbSUPER 0.4 -14.0 -14015 1.9 CTCF SAP130 TEAD1 NRF1 CEBPB DPF2 TEAD3 CTBP1 JUND IKZF1 SKP1 RPS13P6 ENSG00000270177
GH05G134244 1.5 Ensembl ENCODE dbSUPER 0.3 -20.7 -20704 4.4 FOXA2 SIN3A ZNF48 ZNF121 ZNF143 FOS CAVIN1 ZNF592 KAT8 MIER3 CDKN2AIPNL SKP1 ENSG00000270177 RPS13P6
GH05G134239 1.4 Ensembl ENCODE dbSUPER 0.3 -26.0 -25997 2.9 PKNOX1 FOXA2 ZNF2 RFX5 ZNF121 ZNF366 FOS CREM THAP11 REST SKP1 ENSG00000270177 RPS13P6
GH05G134255 0.8 ENCODE dbSUPER 0.4 -11.8 -11798 1.1 SCRT2 CEBPB FOS EP300 JADE2 SKP1 RPS13P6 ENSG00000270177
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS13P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS13P6 Gene

Chromosome:
5
Start:
134,267,386 bp from pter
End:
134,267,897 bp from pter
Size:
512 bases
Orientation:
Plus strand

Genomic View for RPS13P6 Gene

Genes around RPS13P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS13P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS13P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS13P6 Gene

Proteins for RPS13P6 Gene

Post-translational modifications for RPS13P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS13P6 Gene

Domains & Families for RPS13P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS13P6 Gene

Function for RPS13P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS13P6 Gene

Localization for RPS13P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS13P6 Gene

Pathways & Interactions for RPS13P6 Gene

SuperPathways for RPS13P6 Gene

No Data Available

Interacting Proteins for RPS13P6 Gene

Gene Ontology (GO) - Biological Process for RPS13P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS13P6 Gene

Drugs & Compounds for RPS13P6 Gene

No Compound Related Data Available

Transcripts for RPS13P6 Gene

mRNA/cDNA for RPS13P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS13P6 Gene

No ASD Table

Relevant External Links for RPS13P6 Gene

GeneLoc Exon Structure for
RPS13P6
ECgene alternative splicing isoforms for
RPS13P6

Expression for RPS13P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS13P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS13P6 Gene:

RPS13P6
genes like me logo Genes that share expression patterns with RPS13P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS13P6 Gene

Orthologs for RPS13P6 Gene

Evolution for RPS13P6 Gene

ENSEMBL:
Gene Tree for RPS13P6 (if available)
TreeFam:
Gene Tree for RPS13P6 (if available)

No data available for Orthologs for RPS13P6 Gene

Paralogs for RPS13P6 Gene

No data available for Paralogs for RPS13P6 Gene

Variants for RPS13P6 Gene

Relevant External Links for RPS13P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS13P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS13P6 Gene

Disorders for RPS13P6 Gene

No disorders were found for RPS13P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS13P6 Gene

Publications for RPS13P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS13P6 Gene

Sources for RPS13P6 Gene

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