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Aliases for RPS13P4 Gene

Aliases for RPS13P4 Gene

  • Ribosomal Protein S13 Pseudogene 4 2 3
  • RPS13_2_199 3
  • AC066692.3 5

External Ids for RPS13P4 Gene

Previous GeneCards Identifiers for RPS13P4 Gene

  • GC02U901623
  • GC02P024127

Summaries for RPS13P4 Gene

GeneCards Summary for RPS13P4 Gene

RPS13P4 (Ribosomal Protein S13 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS13P4 Gene

Genomics for RPS13P4 Gene

Regulatory Elements for RPS13P4 Gene

Enhancers for RPS13P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F023900 0.8 Ensembl ENCODE 0.8 +0.9 908 3.2 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZNF143 ZNF207 ZNF548 FAM228B UBXN2A ATAD2B ENSG00000242628 SF3B6 PFN4 RPS13P4
GH02F023904 0.2 Ensembl 0.8 +4.3 4309 1.6 ARID1B PKNOX1 ZNF146 RFX1 NCOR1 SMARCA4 TAL1 ZMYM3 UBXN2A ATAD2B FAM228B SF3B6 PFN4 RPS13P4
GH02F023891 0.5 Ensembl ENCODE 0.4 -8.6 -8612 1.1 PKNOX1 BMI1 RELA ETV6 CREM CHD2 MTA2 CBFB TRIM22 TEAD2 UBXN2A PFN4 RPS13P4 PGAM1P6
GH02F023916 0.8 Ensembl ENCODE 0.3 +16.8 16808 2.2 ZNF384 CEBPG RARA ZNF121 NR2F6 HOMEZ NFE2L2 NR2F1 CEBPB ZBTB8A UBXN2A FKBP1B PFN4 ATAD2B RPS13P4
GH02F023918 0.2 Ensembl 0.3 +18.2 18208 0.2 SCRT1 ZNF664 SCRT2 UBXN2A ATAD2B RPS13P4
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS13P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS13P4 Gene

Chromosome:
2
Start:
23,900,693 bp from pter
End:
23,901,149 bp from pter
Size:
457 bases
Orientation:
Plus strand

Genomic View for RPS13P4 Gene

Genes around RPS13P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS13P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS13P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS13P4 Gene

Proteins for RPS13P4 Gene

Post-translational modifications for RPS13P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS13P4 Gene

Domains & Families for RPS13P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS13P4 Gene

Function for RPS13P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS13P4 Gene

Localization for RPS13P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS13P4 Gene

Pathways & Interactions for RPS13P4 Gene

SuperPathways for RPS13P4 Gene

No Data Available

Interacting Proteins for RPS13P4 Gene

Gene Ontology (GO) - Biological Process for RPS13P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS13P4 Gene

Transcripts for RPS13P4 Gene

mRNA/cDNA for RPS13P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS13P4 Gene

No ASD Table

Relevant External Links for RPS13P4 Gene

GeneLoc Exon Structure for
RPS13P4
ECgene alternative splicing isoforms for
RPS13P4

Expression for RPS13P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS13P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS13P4 Gene:

RPS13P4
genes like me logo Genes that share expression patterns with RPS13P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS13P4 Gene

Orthologs for RPS13P4 Gene

Evolution for RPS13P4 Gene

ENSEMBL:
Gene Tree for RPS13P4 (if available)
TreeFam:
Gene Tree for RPS13P4 (if available)

No data available for Orthologs for RPS13P4 Gene

Paralogs for RPS13P4 Gene

No data available for Paralogs for RPS13P4 Gene

Variants for RPS13P4 Gene

Relevant External Links for RPS13P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS13P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS13P4 Gene

Disorders for RPS13P4 Gene

No disorders were found for RPS13P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS13P4 Gene

Publications for RPS13P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS13P4 Gene

Sources for RPS13P4 Gene

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