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Aliases for RPS13P2 Gene

Aliases for RPS13P2 Gene

  • Ribosomal Protein S13 Pseudogene 2 2 3 5
  • RPS13_1_51 3

External Ids for RPS13P2 Gene

Previous GeneCards Identifiers for RPS13P2 Gene

  • GC01M053012
  • GC01M053238

Summaries for RPS13P2 Gene

GeneCards Summary for RPS13P2 Gene

RPS13P2 (Ribosomal Protein S13 Pseudogene 2) is a Pseudogene.

Additional gene information for RPS13P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS13P2 Gene

Genomics for RPS13P2 Gene

Regulatory Elements for RPS13P2 Gene

Enhancers for RPS13P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H052550 1.4 FANTOM5 ENCODE 12.2 +219.8 219776 5 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 CBX5 ZNF143 ZNF207 ENSG00000228838 ZCCHC11 PRPF38A CC2D1B LOC100652967 TXNDC12-AS1 ENSG00000226938 GAPDHP51 SLC25A6P3 MAGOH
GH01H052138 1.3 ENCODE dbSUPER 12.1 +631.5 631511 4 HDGF FOXA2 ARNT ZFP64 ARID4B SIN3A ZNF2 ZNF766 ZNF143 ZNF207 PRPF38A ZCCHC11 RPS13P2 ENSG00000230953 ENSG00000266993 PODN CC2D1B LOC100190934 GPX7 TXNDC12
GH01H053324 1.3 ENCODE dbSUPER 11.2 -553.7 -553661 4 HNRNPUL1 HDGF PKNOX1 ARID4B SIN3A ZNF2 ZBTB7B ZNF143 FOS SP3 MAGOH PRPF38A RPS13P2 LRRC42 SSBP3-AS1 GPX7 LRP8 C1orf123 GC01M053305
GH01H052725 1.1 ENCODE 12.4 +46.0 45983 1 HDGF PKNOX1 ARNT ARID4B SIN3A YBX1 ZNF2 SP3 ZNF592 KAT8 PRPF38A MAGOH RPS13P2 ECHDC2 ENSG00000230953 ENSG00000266993 ZYG11B ZYG11A GC01P052729
GH01H053132 1.3 Ensembl ENCODE dbSUPER 10.3 -361.7 -361680 4 BCOR ZMYM3 CEBPG FOSL1 ZNF766 POLR2A ADNP ZNF584 MAFK SMARCA5 MAGOH NDC1 ENSG00000230953 PODN SLC1A7 LRRC42 ZCCHC11 RPS13P2 ECHDC2 PLA2G12AP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS13P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS13P2 Gene

Chromosome:
1
Start:
52,772,153 bp from pter
End:
52,772,674 bp from pter
Size:
522 bases
Orientation:
Minus strand

Genomic View for RPS13P2 Gene

Genes around RPS13P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS13P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS13P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS13P2 Gene

Proteins for RPS13P2 Gene

Post-translational modifications for RPS13P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS13P2 Gene

Domains & Families for RPS13P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS13P2 Gene

Function for RPS13P2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS13P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS13P2 Gene

Localization for RPS13P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS13P2 Gene

Pathways & Interactions for RPS13P2 Gene

SuperPathways for RPS13P2 Gene

No Data Available

Interacting Proteins for RPS13P2 Gene

Gene Ontology (GO) - Biological Process for RPS13P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS13P2 Gene

Drugs & Compounds for RPS13P2 Gene

No Compound Related Data Available

Transcripts for RPS13P2 Gene

mRNA/cDNA for RPS13P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS13P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS13P2 Gene

No ASD Table

Relevant External Links for RPS13P2 Gene

GeneLoc Exon Structure for
RPS13P2
ECgene alternative splicing isoforms for
RPS13P2

Expression for RPS13P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS13P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS13P2 Gene:

RPS13P2
genes like me logo Genes that share expression patterns with RPS13P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS13P2 Gene

Orthologs for RPS13P2 Gene

Evolution for RPS13P2 Gene

ENSEMBL:
Gene Tree for RPS13P2 (if available)
TreeFam:
Gene Tree for RPS13P2 (if available)

No data available for Orthologs for RPS13P2 Gene

Paralogs for RPS13P2 Gene

No data available for Paralogs for RPS13P2 Gene

Variants for RPS13P2 Gene

Relevant External Links for RPS13P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS13P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS13P2 Gene

Disorders for RPS13P2 Gene

No disorders were found for RPS13P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS13P2 Gene

Publications for RPS13P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS13P2 Gene

Sources for RPS13P2 Gene

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