Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS13P2 Gene

Aliases for RPS13P2 Gene

  • Ribosomal Protein S13 Pseudogene 2 2 3 5
  • RPS13_1_51 3

External Ids for RPS13P2 Gene

Previous GeneCards Identifiers for RPS13P2 Gene

  • GC01M053012
  • GC01M053238

Summaries for RPS13P2 Gene

GeneCards Summary for RPS13P2 Gene

RPS13P2 (Ribosomal Protein S13 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS13P2 Gene

Genomics for RPS13P2 Gene

Regulatory Elements for RPS13P2 Gene

Enhancers for RPS13P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F052725 0.6 ENCODE 12.3 +46.0 45983 1.7 HDGF PKNOX1 ARNT ARID4B SIN3A YBX1 ZNF2 SP3 KAT8 SMARCA4 MAGOH RPS13P2 ECHDC2 ENSG00000230953 ENSG00000266993 ZYG11B ZYG11A GC01P052729
GH01F052550 0.7 FANTOM5 ENCODE 12.2 +219.8 219776 5.6 HDGF CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ZNF766 ENSG00000228838 CC2D1B GPX7 LOC100652967 TXNDC12-AS1 LOC105378729 GAPDHP51 SLC25A6P3 ZCCHC11 MAGOH
GH01F052138 0.5 ENCODE 12.1 +631.5 631511 4.7 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A ZNF48 ZNF2 ZNF121 GLIS2 RPS13P2 ENSG00000230953 ENSG00000266993 CC2D1B LOC100190934 GPX7 ZCCHC11 TXNDC12 ZFYVE9 PIR34571
GH01F052053 0.2 ENCODE 9.9 +716.8 716846 4.4 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ENSG00000266993 ENSG00000230953 KTI12 ENSG00000223390 ZCCHC11 TXNDC12 GPX7 RPS13P2 LOC100190934 TTC39A
GH01F053237 1.3 FANTOM5 ENCODE 9.9 -465.9 -465925 2.0 HDGF PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 C1orf123 PODN ENSG00000230953 ENSG00000236723 MAGOH CYB5RL LINC01771 LRP8 ZCCHC11 GPX7
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS13P2 on UCSC Golden Path with GeneCards custom track

Promoters for RPS13P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001744930 73 399 PKNOX1 MLX CREB3L1 ARID4B SIN3A DMAP1 ZNF143 NFYC MXD4 ZHX2

Genomic Location for RPS13P2 Gene

Chromosome:
1
Start:
52,772,153 bp from pter
End:
52,772,674 bp from pter
Size:
522 bases
Orientation:
Minus strand

Genomic View for RPS13P2 Gene

Genes around RPS13P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS13P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS13P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS13P2 Gene

Proteins for RPS13P2 Gene

Post-translational modifications for RPS13P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS13P2 Gene

Domains & Families for RPS13P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS13P2 Gene

Function for RPS13P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS13P2 Gene

Localization for RPS13P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS13P2 Gene

Pathways & Interactions for RPS13P2 Gene

SuperPathways for RPS13P2 Gene

No Data Available

Interacting Proteins for RPS13P2 Gene

Gene Ontology (GO) - Biological Process for RPS13P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS13P2 Gene

Transcripts for RPS13P2 Gene

mRNA/cDNA for RPS13P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS13P2 Gene

No ASD Table

Relevant External Links for RPS13P2 Gene

GeneLoc Exon Structure for
RPS13P2
ECgene alternative splicing isoforms for
RPS13P2

Expression for RPS13P2 Gene

mRNA expression in normal human tissues for RPS13P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS13P2 Gene:

RPS13P2
genes like me logo Genes that share expression patterns with RPS13P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS13P2 Gene

Orthologs for RPS13P2 Gene

Evolution for RPS13P2 Gene

ENSEMBL:
Gene Tree for RPS13P2 (if available)
TreeFam:
Gene Tree for RPS13P2 (if available)

No data available for Orthologs for RPS13P2 Gene

Paralogs for RPS13P2 Gene

No data available for Paralogs for RPS13P2 Gene

Variants for RPS13P2 Gene

Relevant External Links for RPS13P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS13P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS13P2 Gene

Disorders for RPS13P2 Gene

No disorders were found for RPS13P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS13P2 Gene

Publications for RPS13P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS13P2 Gene

Sources for RPS13P2 Gene

Content
Loading form....