RPS13 Gene
protein-coding GIFtS : 60
GCID: GC11 M017055
ribosomal protein S13
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Aliasesfor RPS13 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Ribosomal Protein S13 1 2 S131 2 40S Ribosomal Protein S132
Export aliases for RPS13 gene to outside databases Previous GC identifers: GC11M018166 GC11M018039 GC11M017135 GC11M017060 GC11M017054 GC11M016780
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Summariesfor RPS13 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for RPS13 : Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S15P family of ribosomal proteins. It is located in the cytoplasm. The protein has been shown to bind to the 5.8S rRNA in rat. The gene product of the E. coli ortholog (ribosomal protein S15) functions at early steps in ribosome assembly. This gene is co-transcribed with two U14 small nucleolar RNA genes, which are located in its third and fifth introns. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. (provided by RefSeq, Jul 2008) Gene Wiki entry for RPS13
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Genomic Viewsfor RPS13 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000011.9 NC_018922.1 NT_009237.18 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the RPS13 gene promoter: Nkx3-1 AP-2rep p53 AP-1 Nkx3-1 v1 YY1 GATA-1 Nkx3-1 v2 Ik-2 Nkx3-1 v3 Other transcription factors Search SABiosciences Chromatin IP Primers for RPS13 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat RPS13
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 11p15 Ensembl cytogenetic band: 11p15.1 HGNC cytogenetic band: 11p RPS13 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 11 GeneLoc Exon Structure
GeneLoc location for GC11M017055: view genomic region
(about GC identifiers )
Start:
17,095,936 bp from pter
End:
17,099,334 bp from pter
Size:
3,399 bases
Orientation:
minus strand
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Proteinsfor RPS13 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: RS13_HUMAN, P62277 (See
protein sequence )Recommended Name: 40S ribosomal protein S13 Size : 151 amino acids; 17222 Da
Secondary accessions : B2R549 P19116 Q02546 Q29200 Q498Y0Explore the universe of human proteins at neXtProt for RPS13: NX_P62277 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P62277 RPS13 Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins: NP_001008.1 ENSEMBL proteins: ENSP00000228140 ENSP00000435777 ENSP00000432096 Reactome Protein details: P62277 Human Recombinant Protein Products for RPS13: Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view) : About this table
RPS13 for ontologies About GeneDecksing RPS13 Antibody Products: Assay Products for RPS13:
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Protein
Domains / Familiesfor RPS13 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
RPS13 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P62277 ProtoNet protein and cluster: P62277
1 Blocks protein family : IPB012606 Ribosomal S13S15 N-terminal UniProtKB/Swiss-Prot: RS13_HUMAN, P62277 Similarity : Belongs to the ribosomal protein S15P family
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Functionfor RPS13 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: Genatlas biochemistry entry for RPS13 : 60S ribosomal protein S13 Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view) : About this table
RPS13 for ontologies About GeneDecksing Phenotypes: 7 GenomeRNAi human phenotypes for RPS13 :Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for RPS13 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for RPS13OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: RPS13 (NM_001017 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for RPS13 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat RPS13
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Pathways & Interactionsfor RPS13 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/7 super-pathways (see all 7 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Synthesis of PB1-F2 2 Translation initiation complex formation 3 Metabolism of mRNA 4 Disease 5 TNF-alpha/NF-kB Signaling Pathway
Pathway sources See GeneCards unified pathways Show all pathways 1 GeneGo (Thomson Reuters) Pathway for RPS13 2 BioSystems Pathways for RPS13 5/32
Reactome Pathways for RPS13 (see all 32 )1
Kegg Pathway (Kegg details for RPS13) :
RPS13 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for RPS13 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)916/953 Interacting proteins for RPS13 (P62277 1 , 2 , 3 ENSP00000228140 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 953 ) (see top 5 )Interactant Interaction Details GeneCard External ID(s) RPL8 P62917 2 , 3 , ENSP00000262584 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=2 STRING: ENSP00000262584 RPL11 P62913 2 , 3 , ENSP00000363676 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000363676 RPL12 P30050 2 , 3 , ENSP00000354739 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000354739 RPL13 P26373 2 , 3 , ENSP00000307889 4 MINT-6542674 MINT-7947479 MINT-6488791 I2D:
score=1 STRING: ENSP00000307889 RPL26 P61254 2 , 3 , ENSP00000293842 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000293842 RPS15A P62244 2 , 3 , ENSP00000318646 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000318646 RPS3 P23396 2 , 3 , ENSP00000278572 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000278572 NAT10 Q9H0A0 2 , 3 , ENSP00000257829 4 MINT-7947479 MINT-6488791 I2D:
score=2 STRING: ENSP00000257829 RPL10A P62906 2 , 3 , ENSP00000363018 4 MINT-6542674 MINT-6489539 I2D:
score=2 STRING: ENSP00000363018 RPS4X P62701 2 , 3 , ENSP00000362744 4 MINT-6542674 MINT-6488791 I2D:
score=2 STRING: ENSP00000362744 RPS8 P62241 2 , 3 , ENSP00000379888 4 MINT-6542674 MINT-8044095 I2D:
score=2 STRING: ENSP00000379888 RPL27 P61353 2 , 3 , ENSP00000253788 4 MINT-6542674 MINT-6489539 I2D:
score=1 STRING: ENSP00000253788 RPL27A P46776 2 , 3 , ENSP00000346015 4 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000346015 RPL35 P42766 2 , 3 , ENSP00000259469 4 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000259469 RPS6 P62753 2 , 3 , ENSP00000369757 4 MINT-6542674 MINT-6488791 I2D:
score=1 STRING: ENSP00000369757 NFKB2 Q00653 2 , 3 MINT-48777 MINT-47929 I2D:
score=5 MAP3K14 Q99558 2 , 3 MINT-48884 MINT-48007 I2D:
score=4 RPS3A P61247 2 , 3 , ENSP00000346050 4 MINT-6488791 I2D:
score=4 STRING: ENSP00000346050 MAP3K1 Q13233 2 , 3 MINT-47983 MINT-48361 I2D:
score=3 RPL30 P62888 2 , 3 , ENSP00000287038 4 MINT-6542674 I2D:
score=2 STRING: ENSP00000287038 NOP56 O00567 2 , 3 , ENSP00000370589 4 MINT-6488791 I2D:
score=1 STRING: ENSP00000370589 PARP1 P09874 2 , 3 , ENSP00000355759 4 MINT-7947479 I2D:
score=1 STRING: ENSP00000355759 RBM39 Q14498 2 , 3 , ENSP00000253363 4 MINT-7947479 I2D:
score=1 STRING: ENSP00000253363 RPL14 P50914 2 , 3 , ENSP00000345156 4 MINT-6488791 I2D:
score=1 STRING: ENSP00000345156 RPL17-C18orf32 P18621 2 , 3 MINT-6488791 I2D:
score=1 RPL19 P84098 2 , 3 , ENSP00000225430 4 MINT-6488791 I2D:
score=1 STRING: ENSP00000225430 RPS16 P62249 2 , 3 , ENSP00000251453 4 MINT-6542674 I2D:
score=1 STRING: ENSP00000251453 TUBG1 P23258 2 , 3 MINT-7947479 I2D:
score=5 GNAS P63092 2 , 3 MINT-7947479 I2D:
score=3 TNPO1 Q92973 2 , 3 MINT-7947479 I2D:
score=2 CNOT3 O75175 2 , 3 MINT-7947479 I2D:
score=1 EMG1 Q92979 2 , 3 MINT-6542674 I2D:
score=1 NSF P46459 2 , 3 MINT-7947479 I2D:
score=1 PSMC3 P17980 2 , 3 MINT-7947479 I2D:
score=1 PSMD2 Q13200 2 , 3 MINT-7947479 I2D:
score=1 SHC1 P29353 2 , 3 MINT-7947479 I2D:
score=1 TRUB1 Q8WWH5 2 , 3 MINT-7947479 I2D:
score=1 UBC P0CG48 2 , 3 , ENSP00000344818 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=3 STRING: ENSP00000344818 RPL6 Q02878 2 , 3 , ENSP00000202773 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000202773 RPL7A P62424 2 , 3 , ENSP00000361076 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000361076 RPL18 Q07020 2 , 3 , ENSP00000084795 4 MINT-6542674 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000084795 RPS20 P60866 2 , 3 , ENSP00000009589 4 MINT-6542674 MINT-6489539 I2D:
score=1 STRING: ENSP00000009589 RPLP0 P05388 2 , ENSP00000339027 4 MINT-6489539 MINT-7947479 MINT-6488791 STRING: ENSP00000339027 RPS9 P46781 2 , 3 , ENSP00000302896 4 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000302896 RPS7 P62081 2 , 3 , ENSP00000339095 4 MINT-6542674 MINT-6488791 I2D:
score=1 STRING: ENSP00000339095 RPL18A Q02543 2 , 3 , ENSP00000222247 4 MINT-6489539 MINT-6488791 I2D:
score=2 STRING: ENSP00000222247 RPL17 P18621 2 , 3 , ENSP00000389465 4 MINT-6488791 I2D:
score=1 STRING: ENSP00000389465 RPL13A P40429 2 , 3 , ENSP00000375730 4 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000375730 RPS26 P62854 2 , ENSP00000348849 4 MINT-6542674 MINT-6489539 MINT-6488791 STRING: ENSP00000348849 RPL15 P61313 2 , 3 , ENSP00000309334 4 MINT-6489539 MINT-6488791 I2D:
score=1 STRING: ENSP00000309334 EEF1A1 P68104 2 MINT-6542674 MINT-6489539 MINT-7947479 MINT-6488791 RPL23 P62829 2 , ENSP00000377865 4 MINT-6542674 MINT-6489539 MINT-6488791 STRING: ENSP00000377865 RPL24 P83731 2 MINT-6542674 MINT-6489539 MINT-7947479 MINT-6488791 RPL7 P18124 2 , ENSP00000339795 4 MINT-6542674 MINT-6489539 MINT-6488791 STRING: ENSP00000339795 RPS2 P15880 2 , ENSP00000341885 4 MINT-6542674 MINT-6489539 MINT-6488791 STRING: ENSP00000341885 SF3B3 Q15393 2 MINT-6542674 MINT-6489539 MINT-7947479 MINT-6488791 RPS5 P46782 2 , 3 , ENSP00000196551 4 MINT-6488791 I2D:
score=1 STRING: ENSP00000196551 RPL28 P46779 2 , ENSP00000401450 4 MINT-6489539 MINT-6488791 STRING: ENSP00000401450 RPL29 P47914 2 , ENSP00000294189 4 MINT-6542674 MINT-6488791 STRING: ENSP00000294189 UPF1 Q92900 2 , ENSP00000262803 4 MINT-7947479 MINT-6488791 STRING: ENSP00000262803 RPS14 P62263 2 , 3 , ENSP00000311028 4 MINT-6542674 I2D:
score=2 STRING: ENSP00000311028 RPS11 P62280 2 , 3 , ENSP00000270625 4 MINT-6542674 I2D:
score=2 STRING: ENSP00000270625 RPL5 P46777 2 , 3 , ENSP00000359345 4 MINT-6542674 I2D:
score=1 STRING: ENSP00000359345 RPS19 P39019 2 , 3 , ENSP00000221975 4 MINT-8044095 I2D:
score=1 STRING: ENSP00000221975 PDCD4 Q53EL6 1 , 3 , ENSP00000280154 4 EBI-351850,EBI-935824 I2D:
score=4 STRING: ENSP00000280154 SUMO1 P63165 2 , 3 , ENSP00000376076 4 MINT-7947479 I2D:
score=1 STRING: ENSP00000376076 NEDD8 Q15843 2 , 3 , ENSP00000250495 4 MINT-6542674 I2D:
score=1 STRING: ENSP00000250495 RPL3 P39023 2 , 3 , ENSP00000346001 4 MINT-6489539 I2D:
score=1 STRING: ENSP00000346001 EIF2A Q9BY44 2 , 3 , ENSP00000417229 4 MINT-6542674 I2D:
score=1 STRING: ENSP00000417229 RPL10 P27635 2 , 3 , ENSP00000341730 4 MINT-6488791 I2D:
score=1 STRING: ENSP00000341730 ACTB P60709 2 , 3 , ENSP00000349960 4 MINT-7947479 I2D:
score=1 STRING: ENSP00000349960 RPL37A P61513 2 , ENSP00000418082 4 MINT-6489539 MINT-6488791 STRING: ENSP00000418082 EIF3B P55884 2 , 3 , ENSP00000354125 4 MINT-7947479 I2D:
score=2 STRING: ENSP00000354125 EIF4A3 P38919 2 , ENSP00000269349 4 MINT-7947479 MINT-6488791 STRING: ENSP00000269349 GEMIN4 P57678 2 MINT-6489539 MINT-7947479 MINT-6488791 HNRNPC P07910 2 MINT-6489539 MINT-7947479 MINT-6488791 HNRNPU Q00839 2 MINT-6489539 MINT-7947479 MINT-6488791 ILF2 Q12905 2 MINT-6489539 MINT-7947479 MINT-6488791 MATR3 P43243 2 MINT-6489539 MINT-7947479 MINT-6488791 NPM1 P06748 2 MINT-6489539 MINT-7947479 MINT-6488791 RPL21 P46778 2 MINT-6542674 MINT-6489539 MINT-6488791 RPL31 P62899 2 , ENSP00000386717 4 MINT-6542674 MINT-7947479 STRING: ENSP00000386717 RPL35A P18077 2 , ENSP00000393393 4 MINT-6542674 MINT-6489539 STRING: ENSP00000393393 RPL4 P36578 2 , ENSP00000311430 4 MINT-6489539 MINT-6488791 STRING: ENSP00000311430 BYSL Q13895 3 , ENSP00000230340 4 I2D:
score=2 STRING: ENSP00000230340 NME1-NME2 P22392 3 I2D:
score=2 NME2 P22392 3 I2D:
score=2 NOC4L Q9BVI4 3 , ENSP00000328854 4 I2D:
score=2 STRING: ENSP00000328854 NOP58 Q9Y2X3 3 , ENSP00000264279 4 I2D:
score=2 STRING: ENSP00000264279 PWP2 Q15269 3 , ENSP00000291576 4 I2D:
score=2 STRING: ENSP00000291576 RPS24 P62847 3 , ENSP00000414321 4 I2D:
score=2 STRING: ENSP00000414321 DHX37 Q8IY37 3 , ENSP00000311135 4 I2D:
score=1 STRING: ENSP00000311135 ESR1 P03372 3 , ENSP00000206249 4 I2D:
score=1 STRING: ENSP00000206249 GPI P06744 3 , ENSP00000348877 4 I2D:
score=1 STRING: ENSP00000348877 IMP3 Q9NV31 3 , ENSP00000326981 4 I2D:
score=1 STRING: ENSP00000326981 KRR1 Q13601 3 , ENSP00000229214 4 I2D:
score=1 STRING: ENSP00000229214 NOL10 Q9BSC4 3 , ENSP00000371101 4 I2D:
score=1 STRING: ENSP00000371101 RPF2 Q9H7B2 3 , ENSP00000402338 4 I2D:
score=1 STRING: ENSP00000402338 RPL26L1 Q9UNX3 3 , ENSP00000265100 4 I2D:
score=1 STRING: ENSP00000265100 RPS17 P08708 3 , ENSP00000346045 4 I2D:
score=1 STRING: ENSP00000346045 UTP15 Q8TED0 3 , ENSP00000296792 4 I2D:
score=1 STRING: ENSP00000296792 WDR3 Q9UNX4 3 , ENSP00000308179 4 I2D:
score=1 STRING: ENSP00000308179 EIF3G O75821 2 , ENSP00000253108 4 MINT-7947479 STRING: ENSP00000253108 EIF3I Q13347 2 , ENSP00000362688 4 MINT-7947479 STRING: ENSP00000362688 RPL22 P35268 2 , ENSP00000346088 4 MINT-7947479 STRING: ENSP00000346088 SRP54 P61011 2 , ENSP00000216774 4 MINT-7947479 STRING: ENSP00000216774 PPP2R1A P30153 2 , ENSP00000324804 4 MINT-7947479 STRING: ENSP00000324804 GNB2L1 P63244 3 , ENSP00000366013 4 I2D:
score=1 STRING: ENSP00000366013 PNO1 Q9NRX1 3 , ENSP00000263657 4 I2D:
score=1 STRING: ENSP00000263657 DCAF13 Q9NV06 3 , ENSP00000297579 4 I2D:
score=1 STRING: ENSP00000297579 BMS1 Q14692 3 , ENSP00000363642 4 I2D:
score=2 STRING: ENSP00000363642 RIOK2 Q9BVS4 3 , ENSP00000283109 4 I2D:
score=2 STRING: ENSP00000283109 PES1 O00541 3 , ENSP00000346725 4 I2D:
score=1 STRING: ENSP00000346725 RPS12 P25398 3 , ENSP00000230050 4 I2D:
score=1 STRING: ENSP00000230050 TSR1 Q2NL82 3 , ENSP00000301364 4 I2D:
score=2 STRING: ENSP00000301364 MRTO4 Q9UKD2 3 , ENSP00000364320 4 I2D:
score=1 STRING: ENSP00000364320 SRRM2 Q9UQ35 3 , ENSP00000301740 4 I2D:
score=1 STRING: ENSP00000301740 RPS17L P0CW22 3 , ENSP00000346046 4 I2D:
score=1 STRING: ENSP00000346046 RPL9 P32969 2 , ENSP00000346022 4 MINT-6542674 STRING: ENSP00000346022 YARS P54577 3 , ENSP00000362576 4 I2D:
score=1 STRING: ENSP00000362576 RPS18 P62269 3 , ENSP00000393241 4 I2D:
score=1 STRING: ENSP00000393241 ESR2 Q92731 3 , ENSP00000343925 4 I2D:
score=1 STRING: ENSP00000343925 AGO1 Q9UL18 2 , ENSP00000362300 4 MINT-6488791 STRING: ENSP00000362300 AGO2 Q9UKV8 2 , ENSP00000220592 4 MINT-6489539 STRING: ENSP00000220592 RPL32 P62910 3 , ENSP00000380156 4 I2D:
score=1 STRING: ENSP00000380156 CDC5L Q99459 2 , ENSP00000360532 4 MINT-7947479 STRING: ENSP00000360532 RPS27L Q71UM5 2 , ENSP00000331019 4 MINT-6489539 STRING: ENSP00000331019 DCC P43146 3 , ENSP00000389140 4 I2D:
score=2 STRING: ENSP00000389140 RRP9 O43818 3 , ENSP00000232888 4 I2D:
score=2 STRING: ENSP00000232888 GRB2 P62993 3 , ENSP00000339007 4 I2D:
score=1 STRING: ENSP00000339007 RRP12 Q5JTH9 3 , ENSP00000360031 4 I2D:
score=1 STRING: ENSP00000360031 RPL36A P83881 3 , ENSP00000404375 4 I2D:
score=1 STRING: ENSP00000404375 RPL23A P62750 2 , ENSP00000389103 4 MINT-6488791 STRING: ENSP00000389103 EIF3A Q14152 3 , ENSP00000358140 4 I2D:
score=2 STRING: ENSP00000358140 MRI1 Q9BV20 3 , ENSP00000040663 4 I2D:
score=5 STRING: ENSP00000040663 COPA P53621 2 MINT-7947479 MINT-6488791 CUL1 Q13616 2 MINT-6542674 MINT-7947479 DDB1 Q16531 2 MINT-6542674 MINT-7947479 DDX39A O00148 2 MINT-7947479 MINT-6488791 DDX47 Q9H0S4 2 MINT-7947479 MINT-6488791 DHX30 Q7L2E3 2 MINT-6489539 MINT-6488791 DHX9 Q08211 2 MINT-6489539 MINT-6488791 DICER1 Q9UPY3 2 MINT-6489539 MINT-6488791 DIMT1 Q9UNQ2 2 , ENSP00000199320 4 MINT-6488791 STRING: ENSP00000199320 EBNA1BP2 Q99848 2 MINT-6489539 MINT-6488791 EEF2 P13639 2 , ENSP00000307940 4 MINT-6542674 STRING: ENSP00000307940 EIF5B O60841 2 , ENSP00000289371 4 MINT-7947479 STRING: ENSP00000289371 ELAVL1 Q15717 2 MINT-7947479 MINT-6488791 ETF1 P62495 2 , ENSP00000353741 4 MINT-7947479 STRING: ENSP00000353741 FBL P22087 2 , ENSP00000221801 4 MINT-6489539 STRING: ENSP00000221801 GCN1L1 Q92616 2 MINT-6542674 MINT-7947479 HSP90AB1 P08238 2 MINT-7947479 MINT-6488791 IGF2BP1 Q9NZI8 2 MINT-6489539 MINT-6488791 LAS1L Q9Y4W2 2 MINT-7947479 MINT-6488791 MYBBP1A Q9BQG0 2 MINT-7947479 MINT-6488791 PABPC1 P11940 2 MINT-6489539 MINT-6488791 PCBP2 Q15366 2 MINT-7947479 MINT-6488791 PHB2 Q99623 2 MINT-6489539 MINT-6488791 POLR1C O15160 2 MINT-7947479 MINT-6488791 PRPF3 O43395 2 MINT-6542674 MINT-7947479 RBM4 Q9BWF3 2 MINT-6489539 MINT-7947479 RPS23 P62266 2 , ENSP00000296674 4 MINT-6542674 STRING: ENSP00000296674 SF3B1 O75533 2 MINT-7947479 MINT-6488791 SLC25A5 P05141 2 MINT-6489539 MINT-6488791 SNRNP200 O75643 2 MINT-7947479 MINT-6488791 SRP68 Q9UHB9 2 , ENSP00000312066 4 MINT-7947479 STRING: ENSP00000312066 SRP72 O76094 2 , ENSP00000342181 4 MINT-7947479 STRING: ENSP00000342181 SYNE1 Q8NF91 2 MINT-6489539 MINT-6488791 TCP1 P17987 2 MINT-7947479 MINT-6488791 UBE2M P61081 2 MINT-6542674 MINT-7947479 UPF2 Q9HAU5 2 , ENSP00000348708 4 MINT-7947479 STRING: ENSP00000348708 WDR18 Q9BV38 2 MINT-7947479 MINT-6488791 ARRB1 P49407 3 I2D:
score=5 LONRF2 Q1L5Z9 3 I2D:
score=5 DHX15 O43143 3 I2D:
score=2 HEATR1 Q9H583 3 I2D:
score=2 MAP1LC3A Q9H492 3 I2D:
score=2 MAPK9 P45984 3 I2D:
score=2 NOB1 Q9ULX3 3 I2D:
score=2 NOL6 Q9H6R4 3 I2D:
score=2 TTC37 Q6PGP7 3 I2D:
score=2 AMBRA1 Q9C0C7 3 I2D:
score=1 AP2B1 P63010 3 I2D:
score=1 APC P25054 3 I2D:
score=1 ARRB2 P32121 3 I2D:
score=1 ATG13 O75143 3 I2D:
score=1 ATG16L1 Q676U5 3 I2D:
score=1 ATG7 O95352 3 I2D:
score=1 ATG9A Q7Z3C6 3 I2D:
score=1 CAMKK2 Q96RR4 3 I2D:
score=1 CEBPZ Q03701 3 I2D:
score=1 CHN2 P52757 3 I2D:
score=1 CLN3 Q13286 3 I2D:
score=1 CNBP P62633 3 I2D:
score=1 CNOT6 Q9ULM6 3 I2D:
score=1 CRK P46108 3 I2D:
score=1 DDIT3 P35638 3 I2D:
score=1 DDX55 Q8NHQ9 3 I2D:
score=1 DOHH Q9BU89 3 I2D:
score=1 ERBB2IP Q96RT1 3 I2D:
score=1 FRS2 Q8WU20 3 I2D:
score=1 GABARAP O95166 3 I2D:
score=1 GABARAPL1 Q9H0R8 3 I2D:
score=1 GABARAPL2 P60520 3 I2D:
score=1 GRB10 Q13322 3 I2D:
score=1 GRB7 Q14451 3 I2D:
score=1 HIF1A Q16665 3 I2D:
score=1 ITPA Q9BY32 3 I2D:
score=1 KBTBD7 Q8WVZ9 3 I2D:
score=1 KIAA0368 Q5VYK3 3 I2D:
score=1 KLHDC10 Q6PID8 3 I2D:
score=1 MAP1LC3B Q9GZQ8 3 I2D:
score=1 MTIF2 P46199 3 I2D:
score=1 NEK9 Q8TD19 3 I2D:
score=1 NSMAF Q92636 3 I2D:
score=1 OSGEP Q9NPF4 3 I2D:
score=1 OSGEPL1 Q9H4B0 3 I2D:
score=1 PAK1 Q13153 3 I2D:
score=1 PDPK1 O15530 3 I2D:
score=1 PIK3C2A O00443 3 I2D:
score=1 PKP2 Q99959 3 I2D:
score=1 PKP3 Q9Y446 3 I2D:
score=1 PRKAA1 Q13131 3 I2D:
score=1 PRKAA2 P54646 3 I2D:
score=1 PRKAB2 O43741 3 I2D:
score=1 PSMD14 O00487 3 I2D:
score=1 PSMD4 P55036 3 I2D:
score=1 PTPN11 Q06124 3 I2D:
score=1 RABGAP1 Q9Y3P9 3 I2D:
score=1 RBM19 Q9Y4C8 3 I2D:
score=1 RPS15 P62841 3 I2D:
score=1 SCD O00767 3 I2D:
score=1 SEC31A O94979 3 I2D:
score=1 SH3GLB1 Q9Y371 3 I2D:
score=1 SHB Q15464 3 I2D:
score=1 SLC2A4 P14672 3 I2D:
score=1 SMURF2 Q9HAU4 3 I2D:
score=1 SQSTM1 Q13501 3 I2D:
score=1 STK11 Q15831 3 I2D:
score=1 STK3 Q13188 3 I2D:
score=1 TP53RK Q96S44 3 I2D:
score=1 UBE2G2 P60604 3 I2D:
score=1 ULK1 O75385 3 I2D:
score=1 ULK2 Q8IYT8 3 I2D:
score=1 UTP20 O75691 3 I2D:
score=1 UVRAG Q9P2Y5 3 I2D:
score=1 WDR46 O15213 3 I2D:
score=1 WIPI2 Q9Y4P8 3 I2D:
score=1 YES1 P07947 3 I2D:
score=1 ABCF1 Q8NE71 2 MINT-7947479 ABCF3 Q9NUQ8 2 MINT-7947479 ACTL6A O96019 2 MINT-7947479 ACTR1A P61163 2 MINT-7947479 ACTR2 P61160 2 MINT-7947479 ADNP Q9H2P0 2 MINT-7947479 AHNAK Q09666 2 MINT-7947479 AKAP8 O43823 2 MINT-7947479 ANAPC1 Q9H1A4 2 MINT-7947479 ANAPC2 Q9UJX6 2 MINT-7947479 ANAPC7 Q9UJX3 2 MINT-7947479 ANLN Q9NQW6 2 MINT-7947479 ANXA11 P50995 2 MINT-7947479 AP1B1 Q10567 2 MINT-7947479 ARCN1 P48444 2 MINT-7947479 ARGLU1 Q9NWB6 2 MINT-7947479 ARHGEF1 Q92888 2 MINT-7947479 ARHGEF2 Q92974 2 MINT-7947479 ARHGEF4 Q9NR80 2 MINT-6542674 ARID1A O14497 2 MINT-7947479 ATAD3B Q5T9A4 2 MINT-6488791 AURKB Q96GD4 2 MINT-7947479 BAZ1A Q9NRL2 2 MINT-7947479 BCAS2 O75934 2 MINT-7947479 BCLAF1 Q9NYF8 2 MINT-7947479 BID P55957 2 MINT-7947479 BRD2 P25440 2 MINT-7947479 BRD4 O60885 2 MINT-7947479 BRD7 Q9NPI1 2 MINT-7947479 BRD8 Q9H0E9 2 MINT-7947479 BTAF1 O14981 2 MINT-7947479 BUB1 O43683 2 MINT-7947479 BUB1B O60566 2 MINT-7947479 BUB3 O43684 2 MINT-7947479 BZW1 Q7L1Q6 2 MINT-7947479 C22orf28 Q9Y3I0 2 MINT-7947479 C7orf13 Q8NI28 2 MINT-7947479 CAPG P40121 2 MINT-7947479 CAPZA1 P52907 2 MINT-7947479 CARD10 Q9BWT7 2 MINT-7947479 CASC5 Q8NG31 2 MINT-7947479 CCNB1 P14635 2 MINT-7947479 CCT2 P78371 2 MINT-7947479 CCT3 P49368 2 MINT-7947479 CCT4 P50991 2 MINT-7947479 CCT5 P48643 2 MINT-7947479 CCT6A P40227 2 MINT-7947479 CCT7 Q99832 2 MINT-7947479 CCT8 P50990 2 MINT-7947479 CDC16 Q13042 2 MINT-7947479 CDC20 Q12834 2 MINT-7947479 CDC23 Q9UJX2 2 MINT-7947479 CDC27 P30260 2 MINT-7947479 CDC73 Q6P1J9 2 MINT-7947479 CDK9 P50750 2 MINT-7947479 CDKN2AIP Q9NXV6 2 MINT-7947479 CHD1L Q86WJ1 2 MINT-7947479 CHD8 Q9HCK8 2 MINT-7947479 CHEK1 O14757 2 MINT-7947479 CKAP5 Q14008 2 MINT-7947479 CLASP1 Q7Z460 2 MINT-7947479 CLINT1 Q14677 2 MINT-7947479 CNOT10 Q9H9A5 2 MINT-7947479 COPB1 P53618 2 MINT-7947479 COPB2 P35606 2 MINT-7947479 COPG1 Q9Y678 2 MINT-7947479 COPG2 Q9UBF2 2 MINT-7947479 COPS5 Q92905 2 MINT-7947479 CPSF2 Q9P2I0 2 MINT-7947479 CPSF3 Q9UKF6 2 MINT-7947479 CPSF7 Q8N684 2 MINT-7947479 CSE1L P55060 2 MINT-7947479 CSTF3 Q12996 2 MINT-7947479 CTNND1 O60716 2 MINT-7947479 CUL2 Q13617 2 MINT-6542674 CUL3 Q13618 2 MINT-6542674 CUL4A Q13619 2 MINT-6542674 CUL4B Q13620 2 MINT-6542674 CUL5 Q93034 2 MINT-6542674 CWC15 Q9P013 2 MINT-7947479 DCTN2 Q13561 2 MINT-7947479 DDX17 Q92841 2 MINT-7947479 DDX18 Q9NVP1 2 MINT-6488791 DDX19A Q9NUU7 2 MINT-7947479 DDX19B Q9UMR2 2 MINT-7947479 DDX39B Q13838 2 MINT-7947479 DDX3X O00571 2 MINT-7947479 DDX41 Q9UJV9 2 MINT-7947479 DDX42 Q86XP3 2 MINT-7947479 DDX5 P17844 2 MINT-7947479 DDX50 Q9BQ39 2 MINT-6488791 DDX6 P26196 2 MINT-7947479 DEPDC7 Q96QD5 2 MINT-7947479 DFNA5 O60443 2 MINT-7947479 DHX36 Q9H2U1 2 MINT-6488791 DIAPH1 O60610 2 MINT-7947479 DIDO1 Q9BTC0 2 MINT-7947479 DLX4 Q92988 2 MINT-6488791 DMAP1 Q9NPF5 2 MINT-7947479 DNAJA1 P31689 2 MINT-7947479 DNM1L O00429 2 MINT-7947479 DNM2 P50570 2 MINT-7947479 DOCK5 Q9H7D0 2 MINT-7947479 DOCK8 Q8NF50 2 MINT-7947479 DRG1 Q9Y295 2 MINT-7947479 DSP P15924 2 MINT-7947479 DTYMK P23919 2 MINT-7947479 DYNC1H1 Q14204 2 MINT-7947479 DYNC1LI1 Q9Y6G9 2 MINT-7947479 DYNC1LI2 O43237 2 MINT-7947479 ECT2 Q9H8V3 2 MINT-7947479 EDC4 Q6P2E9 2 MINT-7947479 EEF1A2 Q05639 2 MINT-6542674 EFTUD2 Q15029 2 MINT-7947479 EHD1 Q9H4M9 2 MINT-7947479 EHD4 Q9H223 2 MINT-7947479 EHMT1 Q9H9B1 2 MINT-7947479 EIF2B4 Q9UI10 2 MINT-7947479 EIF2D P41214 2 MINT-7947479 EIF2S3 P41091 2 MINT-7947479 EIF4A1 P60842 2 MINT-7947479 EIF4A2 Q14240 2 MINT-7947479 EIF4G2 P78344 2 MINT-7947479 ELF2 Q15723 2 MINT-7947479 ENAH Q8N8S7 2 MINT-7947479 ENSG00000266714 Q96JP2 2 MINT-7947479 EPB41L3 Q9Y2J2 2 MINT-7947479 EPPK1 P58107 2 MINT-7947479 EPRS P07814 2 MINT-6488791 EPS8L2 Q9H6S3 2 MINT-7947479 ERAL1 O75616 2 MINT-7947479 ERCC1 P07992 2 MINT-7947479 ERCC4 Q92889 2 MINT-6542674 ERCC6L Q2NKX8 2 MINT-7947479 ETV6 P41212 2 MINT-7947479 EWSR1 Q01844 2 MINT-7947479 EXOC2 Q96KP1 2 MINT-7947479 EXOC4 Q96A65 2 MINT-7947479 EXOC5 O00471 2 MINT-7947479 EXOC7 Q9UPT5 2 MINT-7947479 EXOSC10 Q01780 2 MINT-7947479 FAF1 Q9UNN5 2 MINT-7947479 FAM129B Q96TA1 2 MINT-7947479 FANCD2 Q9BXW9 2 MINT-7947479 FANCI Q9NVI1 2 MINT-7947479 FASN P49327 2 MINT-7947479 FEN1 P39748 2 MINT-7947479 FERMT1 Q9BQL6 2 MINT-7947479 FHOD1 Q9Y613 2 MINT-7947479 FLG2 Q5D862 2 MINT-6488791 FMR1 Q06787 2 MINT-6488791 FUS P35637 2 MINT-7947479 FXR1 P51114 2 MINT-6489539 FXR2 P51116 2 MINT-6488791 GAPDH P04406 2 MINT-7947479 GATAD2A Q86YP4 2 MINT-7947479 GEMIN2 O14893 2 MINT-6488791 GEMIN6 Q8WXD5 2 MINT-7947479 GMPS P49915 2 MINT-7947479 GNB3 P16520 2 MINT-7947479 GNL3 Q9BVP2 2 MINT-6488791 GOLGB1 Q14789 2 MINT-7947479 GPS2 Q13227 2 MINT-7947479 GTF2I P78347 2 MINT-7947479 GTF3C1 Q12789 2 MINT-6488791 GTF3C2 Q8WUA4 2 MINT-7947479 GTF3C4 Q9UKN8 2 MINT-6488791 GTF3C5 Q9Y5Q8 2 MINT-7947479 GTPBP1 O00178 2 MINT-7947479 GULP1 Q9UBP9 2 MINT-7947479 H2AFX P16104 2 MINT-6542674 HARS P12081 2 MINT-6542674 HAUS7 Q99871 2 MINT-7947479 HBS1L Q9Y450 2 MINT-7947479 HDAC1 Q13547 2 MINT-7947479 HDAC2 Q92769 2 MINT-7947479 HDLBP Q00341 2 MINT-7947479 HELLS Q9NRZ9 2 MINT-7947479 HERC5 Q9UII4 2 MINT-6489539 HIC2 Q96JB3 2 MINT-7947479 HIP1R O75146 2 MINT-7947479 HIRA P54198 2 MINT-7947479 HIST1H2AB P04908 2 MINT-6489539 HIST1H2AE P04908 2 MINT-6489539 HIST2H2BE Q16778 2 MINT-6542674 HLTF Q14527 2 MINT-7947479 HNRNPA2B1 P22626 2 MINT-7947479 HNRNPF P52597 2 MINT-7947479 HNRNPH1 P31943 2 MINT-7947479 HNRNPK P61978 2 MINT-7947479 HNRNPL P14866 2 MINT-6488791 HNRNPM P52272 2 MINT-7947479 HSP90AA1 P07900 2 MINT-7947479 HSP90B1 P14625 2 MINT-7947479 HSPA12A O43301 2 MINT-7947479 HSPA5 P11021 2 MINT-7947479 HSPA6 P17066 2 MINT-7947479 HSPA8 P11142 2 MINT-7947479 HSPB1 P04792 2 MINT-7947479 HSPD1 P10809 2 MINT-7947479 HUWE1 Q7Z6Z7 2 MINT-7947479 IGF2BP3 O00425 2 MINT-6488791 IKBKAP O95163 2 MINT-7947479 ILF3 Q12906 2 MINT-6488791 IMMT Q16891 2 MINT-6488791 INTS1 Q8N201 2 MINT-7947479 INTS3 Q68E01 2 MINT-7947479 INTS6 Q9UL03 2 MINT-7947479 INTS8 Q75QN2 2 MINT-7947479 IPO5 O00410 2 MINT-7947479 IPO7 O95373 2 MINT-7947479 IPO9 Q96P70 2 MINT-7947479 IQGAP1 P46940 2 MINT-7947479 ITPK1 Q13572 2 MINT-7947479 KANSL1 Q7Z3B3 2 MINT-7947479 KDM1A O60341 2 MINT-7947479 KHDRBS1 Q07666 2 MINT-7947479 KIF11 P52732 2 MINT-7947479 KIF21A Q7Z4S6 2 MINT-7947479 KIF2C Q99661 2 MINT-7947479 KIF4A O95239 2 MINT-7947479 KPNA2 P52292 2 MINT-7947479 KPNB1 Q14974 2 MINT-7947479 LENG9 Q96B70 2 MINT-7947479 LIMS1 P48059 2 MINT-7947479 LMNA P02545 2 MINT-7947479 LMO7 Q8WWI1 2 MINT-7947479 LRRC1 Q9BTT6 2 MINT-7947479 LRRC40 Q9H9A6 2 MINT-7947479 LRWD1 Q9UFC0 2 MINT-7947479 MAD1L1 Q9Y6D9 2 MINT-7947479 MAGEE2 Q8TD90 2 MINT-7947479 MAP2K4 P45985 2 MINT-7947479 MAP2K7 O14733 2 MINT-7947479 MAP7 Q14244 2 MINT-7947479 MARK2 Q7KZI7 2 MINT-7947479 MCF2L O15068 2 MINT-6488791 MCM4 P33991 2 MINT-6542674 MCM5 P33992 2 MINT-6542674 MDN1 Q9NU22 2 MINT-7947479 MED12 Q93074 2 MINT-7947479 MED12L Q86YW9 2 MINT-7947479 MED16 Q9Y2X0 2 MINT-7947479 MED4 Q9NPJ6 2 MINT-7947479 MELK Q14680 2 MINT-7947479 MOV10 Q9HCE1 2 MINT-6488791 MPP2 Q14168 2 MINT-7947479 MRE11A P49959 2 MINT-7947479 MSH2 P43246 2 MINT-7947479 MSH6 P52701 2 MINT-7947479 MTA2 O94776 2 MINT-7947479 MTA3 Q9BTC8 2 MINT-7947479 MVP Q14764 2 MINT-7947479 MYH9 P35579 2 MINT-7947479 MYO15B Q96JP2 2 MINT-7947479 NACC1 Q96RE7 2 MINT-7947479 NAE1 Q13564 2 MINT-6542674 NBN O60934 2 MINT-7947479 NCAPD2 Q15021 2 MINT-7947479 NCAPH Q15003 2 MINT-7947479 NCL P19338 2 MINT-6488791 NCOR1 O75376 2 MINT-7947479 NDC80 O14777 2 MINT-7947479 NELFB Q8WX92 2 MINT-7947479 NF1 P21359 2 MINT-7947479 NIPBL Q6KC79 2 MINT-7947479 NONO Q15233 2 MINT-7947479 NRG1 Q02297 2 MINT-7947479 NSUN5 Q96P11 2 MINT-7947479 NUDC Q9Y266 2 MINT-7947479 NUDT21 O43809 2 MINT-7947479 NUF2 Q9BZD4 2 MINT-7947479 NUP107 P57740 2 MINT-7947479 NUP155 O75694 2 MINT-7947479 NUP93 Q8N1F7 2 MINT-7947479 ORC2 Q13416 2 MINT-7947479 ORC3 Q9UBD5 2 MINT-7947479 OXSR1 O95747 2 MINT-7947479 PABPC3 Q9H361 2 MINT-6488791 PAK1IP1 Q9NWT1 2 MINT-6488791 PAK4 O96013 2 MINT-7947479 PARVA Q9NVD7 2 MINT-7947479 PARVB Q9HBI1 2 MINT-7947479 PCBP1 Q15365 2 MINT-7947479 PCNA P12004 2 MINT-6542674 PCNT O95613 2 MINT-7947479 PDLIM7 Q9NR12 2 MINT-7947479 PELO Q9BRX2 2 MINT-7947479 PELP1 Q8IZL8 2 MINT-6488791 PFKM P08237 2 MINT-7947479 PFKP Q01813 2 MINT-7947479 PHB P35232 2 MINT-6488791 PHGDH O43175 2 MINT-7947479 PIAS1 O75925 2 MINT-6542674 PIAS2 O75928 2 MINT-6542674 PICALM Q13492 2 MINT-7947479 PKN2 Q16513 2 MINT-7947479 PLEC Q15149 2 MINT-7947479 PLK1 P53350 2 MINT-7947479 PLRG1 O43660 2 MINT-7947479 PNN Q9H307 2 MINT-7947479 POLD1 P28340 2 MINT-7947479 POLR1A O95602 2 MINT-6488791 POLR3D P05423 2 MINT-7947479 POLR3E Q9NVU0 2 MINT-7947479 PPFIA1 Q13136 2 MINT-7947479 PPM1D O15297 2 MINT-7947479 PPP1CA P62136 2 MINT-7947479 PRCC Q92733 2 MINT-7947479 PRKDC P78527 2 MINT-7947479 PRMT5 O14744 2 MINT-6489539 PRPF19 Q9UMS4 2 MINT-7947479 PRPF4B Q13523 2 MINT-7947479 PRPF6 O94906 2 MINT-7947479 PRPF8 Q6P2Q9 2 MINT-7947479 PSMC1 P62191 2 MINT-7947479 PSMC2 P35998 2 MINT-7947479 PSMC4 P43686 2 MINT-7947479 PSMC5 P62195 2 MINT-7947479 PSMC6 P62333 2 MINT-7947479 PSMD1 Q99460 2 MINT-7947479 PSMD11 O00231 2 MINT-7947479 PSMD12 O00232 2 MINT-7947479 PSMD13 Q9UNM6 2 MINT-7947479 PSMD3 O43242 2 MINT-7947479 PSTPIP2 Q9H939 2 MINT-7947479 PTBP1 P26599 2 MINT-7947479 PTBP2 Q9UKA9 2 MINT-7947479 PTBP3 O95758 2 MINT-7947479 PUM1 Q14671 2 MINT-7947479 RACGAP1 Q9H0H5 2 MINT-7947479 RAD18 Q9NS91 2 MINT-7947479 RAD50 Q92878 2 MINT-7947479 RALY Q9UKM9 2 MINT-7947479 RANBP2 P49792 2 MINT-7947479 RANGAP1 P46060 2 MINT-7947479 RAVER1 Q8IY67 2 MINT-7947479 RBBP4 Q09028 2 MINT-7947479 RBBP5 Q15291 2 MINT-7947479 RBBP7 Q16576 2 MINT-7947479 RBM17 Q96I25 2 MINT-7947479 RBM45 Q8IUH3 2 MINT-7947479 RBM7 Q9Y580 2 MINT-7947479 RBMX P38159 2 MINT-7947479 RCOR1 Q9UKL0 2 MINT-7947479 RELA Q04206 2 MINT-48971 RFC2 P35250 2 MINT-7947479 RFC3 P40938 2 MINT-7947479 RFC4 P35249 2 MINT-7947479 RFC5 P40937 2 MINT-7947479 RFX1 P22670 2 MINT-7947479 RFX5 P48382 2 MINT-7947479 RIF1 Q5UIP0 2 MINT-7947479 RNF130 Q86XS8 2 MINT-7947479 RNF17 Q9BXT8 2 MINT-7947479 ROCK2 O75116 2 MINT-7947479 RPL9P7 P32969 2 MINT-6542674 RPL9P8 P32969 2 MINT-6542674 RPL9P9 P32969 2 MINT-6542674 RPS6KA4 O75676 2 MINT-7947479 RPS6KB2 Q9UBS0 2 MINT-7947479 RSL1D1 O76021 2 MINT-6488791 RUVBL1 Q9Y265 2 MINT-7947479 RUVBL2 Q9Y230 2 MINT-7947479 RXRB P28702 2 MINT-7947479 SART1 O43290 2 MINT-7947479 SART3 Q15020 2 MINT-6488791 SCAF8 Q9UPN6 2 MINT-7947479 SCRIB Q14160 2 MINT-7947479 SCYL2 Q6P3W7 2 MINT-7947479 SEC23A Q15436 2 MINT-7947479 SEC24C P53992 2 MINT-7947479 SEH1L Q96EE3 2 MINT-7947479 SENP3 Q9H4L4 2 MINT-7947479 SEPT9 Q9UHD8 2 MINT-7947479 SETX Q7Z333 2 MINT-7947479 SF3A1 Q15459 2 MINT-7947479 SF3A2 Q15428 2 MINT-7947479 SF3A3 Q12874 2 MINT-7947479 SF3B14 Q9Y3B4 2 MINT-7947479 SF3B2 Q13435 2 MINT-7947479 SFPQ P23246 2 MINT-7947479 SHROOM3 Q8TF72 2 MINT-7947479 SIN3A Q96ST3 2 MINT-7947479 SKIV2L2 P42285 2 MINT-7947479 SLC25A3 Q00325 2 MINT-6488791 SMARCA5 O60264 2 MINT-7947479 SMARCAD1 Q9H4L7 2 MINT-7947479 SMARCB1 Q12824 2 MINT-7947479 SMARCC1 Q92922 2 MINT-7947479 SMARCC2 Q8TAQ2 2 MINT-7947479 SMARCD1 Q96GM5 2 MINT-7947479 SMARCE1 Q969G3 2 MINT-7947479 SMC1A Q14683 2 MINT-7947479 SMC2 O95347 2 MINT-7947479 SMC3 Q9UQE7 2 MINT-7947479 SMC4 Q9NTJ3 2 MINT-7947479 SMCHD1 A6NHR9 2 MINT-7947479 SMN1 Q16637 2 MINT-7947479 SMN2 Q16637 2 MINT-7947479 SNAPC4 Q5SXM2 2 MINT-7947479 SNRNP40 Q96DI7 2 MINT-7947479 SNRNP70 P08621 2 MINT-7947479 SNRPA P09012 2 MINT-7947479 SNRPA1 P09661 2 MINT-7947479 SNRPD1 P62314 2 MINT-7947479 SNRPD3 P62318 2 MINT-7947479 SNRPE P62304 2 MINT-7947479 SNW1 Q13573 2 MINT-7947479 SNX12 Q9UMY4 2 MINT-7947479 SNX2 O60749 2 MINT-7947479 SOGA2 Q9Y4B5 2 MINT-7947479 SPATA5 Q8NB90 2 MINT-7947479 SPEN Q96T58 2 MINT-7947479 SPTAN1 Q13813 2 MINT-7947479 SPTBN1 Q01082 2 MINT-7947479 SREK1 Q8WXA9 2 MINT-7947479 SRRM1 Q8IYB3 2 MINT-7947479 SRSF1 Q07955 2 MINT-7947479 SRSF4 Q08170 2 MINT-7947479 SRSF7 Q16629 2 MINT-7947479 SSRP1 Q08945 2 MINT-6542674 SSUH2 Q9Y2M2 2 MINT-7947479 STAB1 Q9NY15 2 MINT-7947479 STAG2 Q8N3U4 2 MINT-7947479 STAT3 P40763 2 MINT-7947479 STK24 Q9Y6E0 2 MINT-7947479 STOML2 Q9UJZ1 2 MINT-6489539 SUGT1 Q9Y2Z0 2 MINT-7947479 SUMO3 P55854 2 MINT-6542674 SUPT16H Q9Y5B9 2 MINT-7947479 SYMPK Q92797 2 MINT-7947479 SYNCRIP O60506 2 MINT-6488791 TAF15 Q92804 2 MINT-7947479 TAF5L O75529 2 MINT-7947479 TANC2 Q9HCD6 2 MINT-7947479 TARDBP Q13148 2 MINT-7947479 TARS P26639 2 MINT-6542674 TBL1XR1 Q9BZK7 2 MINT-7947479 TBL2 Q9Y4P3 2 MINT-6488791 TEX10 Q9NXF1 2 MINT-6488791 THAP1 Q9NVV9 2 MINT-7947479 THRAP3 Q9Y2W1 2 MINT-7947479 TIAL1 Q01085 2 MINT-7947479 TLN1 Q9Y490 2 MINT-7947479 TLN2 Q9Y4G6 2 MINT-7947479 TMOD3 Q9NYL9 2 MINT-7947479 TMPO P42166 2 MINT-7947479 TNFAIP2 Q03169 2 MINT-7947479 TNKS1BP1 Q9C0C2 2 MINT-7947479 TPR P12270 2 MINT-7947479 TPX2 Q9ULW0 2 MINT-7947479 TRAP1 Q12931 2 MINT-7947479 TRIM21 P19474 2 MINT-7947479 TRIM28 Q13263 2 MINT-7947479 TRIP13 Q15645 2 MINT-7947479 TRMT1L Q7Z2T5 2 MINT-7947479 TRRAP Q9Y4A5 2 MINT-7947479 TSG101 Q99816 2 MINT-7947479 TUBA1C Q9BQE3 2 MINT-7947479 TUBA4A P68366 2 MINT-7947479 TUBB P07437 2 MINT-7947479 TUBB4B P68371 2 MINT-7947479 TUBGCP2 Q9BSJ2 2 MINT-7947479 TUBGCP3 Q96CW5 2 MINT-7947479 TUBGCP4 Q9UGJ1 2 MINT-7947479 TWF1 Q12792 2 MINT-7947479 U2AF1 Q01081 2 MINT-7947479 U2AF2 P26368 2 MINT-7947479 U2SURP O15042 2 MINT-7947479 UBA5 Q9GZZ9 2 MINT-7947479 UBE2N P61088 2 MINT-7947479 UBE2S Q16763 2 MINT-7947479 UBL4A P11441 2 MINT-7947479 UBN1 Q9NPG3 2 MINT-7947479 UCHL5 Q9Y5K5 2 MINT-7947479 UMPS P11172 2 MINT-7947479 UNC45A Q9H3U1 2 MINT-7947479 USO1 O60763 2 MINT-7947479 USP10 Q14694 2 MINT-7947479 USP24 Q9UPU5 2 MINT-7947479 USP39 Q53GS9 2 MINT-7947479 VIM P08670 2 MINT-7947479 VPS33A Q96AX1 2 MINT-7947479 VPS33B Q9H267 2 MINT-7947479 VPS36 Q86VN1 2 MINT-7947479 VPS51 Q9UID3 2 MINT-7947479 WDR33 Q9C0J8 2 MINT-7947479 WRNIP1 Q96S55 2 MINT-7947479 XPO5 Q9HAV4 2 MINT-7947479 XRCC6 P12956 2 MINT-6488791 XRN2 Q9H0D6 2 MINT-7947479 YEATS4 O95619 2 MINT-7947479 YLPM1 P49750 2 MINT-7947479 YWHAE P62258 2 MINT-7947479 YWHAG P61981 2 MINT-6542674 YWHAH Q04917 2 MINT-6542674 ZBTB7C A1YPR0 2 MINT-7947479 ZC3HC1 Q86WB0 2 MINT-7947479 ZNF326 Q5BKZ1 2 MINT-6488791 ZNF638 Q14966 2 MINT-7947479 DDOST ENSP00000364188 4 STRING: ENSP00000364188 EIF2S1 ENSP00000256383 4 STRING: ENSP00000256383 EIF2S2 ENSP00000364119 4 STRING: ENSP00000364119 EIF3D ENSP00000216190 4 STRING: ENSP00000216190 EIF3E ENSP00000220849 4 STRING: ENSP00000220849 EIF3F ENSP00000310040 4 STRING: ENSP00000310040 EIF3H ENSP00000276682 4 STRING: ENSP00000276682 EIF3J ENSP00000261868 4 STRING: ENSP00000261868 EIF3K ENSP00000248342 4 STRING: ENSP00000248342 EIF4B ENSP00000262056 4 STRING: ENSP00000262056 EIF4E ENSP00000280892 4 STRING: ENSP00000280892 EIF4G1 ENSP00000316879 4 STRING: ENSP00000316879 EIF5 ENSP00000216554 4 STRING: ENSP00000216554 GSPT2 ENSP00000341247 4 STRING: ENSP00000341247 RBM8A ENSP00000333001 4 STRING: ENSP00000333001 RPL34 ENSP00000378160 4 STRING: ENSP00000378160 RPL37 ENSP00000274242 4 STRING: ENSP00000274242 RPL38 ENSP00000309830 4 STRING: ENSP00000309830 RPLP1 ENSP00000346037 4 STRING: ENSP00000346037 RPN1 ENSP00000296255 4 STRING: ENSP00000296255 RPN2 ENSP00000237530 4 STRING: ENSP00000237530 SEC11A ENSP00000268220 4 STRING: ENSP00000268220 SEC61B ENSP00000223641 4 STRING: ENSP00000223641 SEC61G ENSP00000341538 4 STRING: ENSP00000341538 SPCS1 ENSP00000233025 4 STRING: ENSP00000233025 SPCS2 ENSP00000263672 4 STRING: ENSP00000263672 SRP14 ENSP00000267884 4 STRING: ENSP00000267884 SRP19 ENSP00000282999 4 STRING: ENSP00000282999 SRPR ENSP00000328023 4 STRING: ENSP00000328023 SSR1 ENSP00000244763 4 STRING: ENSP00000244763 SSR2 ENSP00000295702 4 STRING: ENSP00000295702 SSR3 ENSP00000265044 4 STRING: ENSP00000265044 SSR4 ENSP00000317331 4 STRING: ENSP00000317331 CASC3 ENSP00000264645 4 STRING: ENSP00000264645 EIF4H ENSP00000265753 4 STRING: ENSP00000265753 INS-IGF2 ENSP00000348986 4 STRING: ENSP00000348986 NCBP1 ENSP00000364289 4 STRING: ENSP00000364289 NCBP2 ENSP00000326806 4 STRING: ENSP00000326806 NKX2-2 ENSP00000366347 4 STRING: ENSP00000366347 PPP2R2A ENSP00000370113 4 STRING: ENSP00000370113 RNPS1 ENSP00000315859 4 STRING: ENSP00000315859 SEC11C ENSP00000299714 4 STRING: ENSP00000299714 SMG5 ENSP00000355261 4 STRING: ENSP00000355261 SMG6 ENSP00000263073 4 STRING: ENSP00000263073 SMG7 ENSP00000340766 4 STRING: ENSP00000340766 SMG8 ENSP00000300917 4 STRING: ENSP00000300917 SMG9 ENSP00000270066 4 STRING: ENSP00000270066 TRAM1 ENSP00000262213 4 STRING: ENSP00000262213 UPF3A ENSP00000364448 4 STRING: ENSP00000364448 UPF3B ENSP00000276201 4 STRING: ENSP00000276201 RPS29 ENSP00000379339 4 STRING: ENSP00000379339 RPS28 ENSP00000397872 4 STRING: ENSP00000397872 RPS10 ENSP00000347271 4 STRING: ENSP00000347271 FAU ENSP00000279259 4 STRING: ENSP00000279259 RPS4Y1 ENSP00000250784 4 STRING: ENSP00000250784 RPS4Y2 ENSP00000288666 4 STRING: ENSP00000288666 RPL36 ENSP00000252543 4 STRING: ENSP00000252543 UBB ENSP00000304697 4 STRING: ENSP00000304697 TCF3 ENSP00000262965 4 STRING: ENSP00000262965 RPS4XP21 ENSP00000420227 4 STRING: ENSP00000420227 RPLP2 ENSP00000322419 4 STRING: ENSP00000322419 RPL3L ENSP00000268661 4 STRING: ENSP00000268661 RPS21 ENSP00000324438 4 STRING: ENSP00000324438 MPHOSPH10 ENSP00000244230 4 STRING: ENSP00000244230 KNCN ENSP00000379607 4 STRING: ENSP00000379607 EIF1 ENSP00000419449 4 STRING: ENSP00000419449 EIF1B ENSP00000232905 4 STRING: ENSP00000232905 RPSA ENSP00000346067 4 STRING: ENSP00000346067 RPSAP58 ENSP00000417240 4 STRING: ENSP00000417240 RPS27 ENSP00000357555 4 STRING: ENSP00000357555 RPL10L ENSP00000298283 4 STRING: ENSP00000298283 MKI67IP ENSP00000285814 4 STRING: ENSP00000285814 RPS27A ENSP00000272317 4 STRING: ENSP00000272317 UBA52 ENSP00000388107 4 STRING: ENSP00000388107 PAPD5 ENSP00000396995 4 STRING: ENSP00000396995 NOP14 ENSP00000315674 4 STRING: ENSP00000315674 ZCCHC13 ENSP00000345633 4 STRING: ENSP00000345633 IMPDH2 ENSP00000321584 4 STRING: ENSP00000321584 RPL36AL ENSP00000346012 4 STRING: ENSP00000346012 IMPDH1 ENSP00000345096 4 STRING: ENSP00000345096 DNAJC2 ENSP00000368565 4 STRING: ENSP00000368565 RPL7L1 ENSP00000346063 4 STRING: ENSP00000346063 -- C9JW42 2 MINT-7947479 -- Q8WU30 2 MINT-7947479 -- ENSP00000410949 4 STRING: ENSP00000410949 -- ENSP00000382149 4 STRING: ENSP00000382149 -- O60747 2 MINT-6488791 -- Q96HX3 2 MINT-6488791 -- ENSP00000273406 4 STRING: ENSP00000273406 -- ENSP00000262414 4 STRING: ENSP00000262414 -- Q8IUJ6 2 MINT-6542674 -- ENSP00000217256 4 STRING: ENSP00000217256 -- ENSP00000236900 4 STRING: ENSP00000236900 -- Q7Z4W5 2 MINT-6542674 -- ENSP00000371069 4 STRING: ENSP00000371069 -- P24049 2 MINT-6489539 -- ENSP00000403931 4 STRING: ENSP00000403931 -- ENSP00000395763 4 STRING: ENSP00000395763 -- ENSP00000381447 4 STRING: ENSP00000381447 -- ENSP00000381900 4 STRING: ENSP00000381900 -- XP_039702 2 MINT-7947479 -- ENSP00000395270 4 STRING: ENSP00000395270 -- ENSP00000237694 4 STRING: ENSP00000237694 -- Q96PK2 2 MINT-7947479 -- P11250 2 MINT-6489539 -- Q9HBD4 2 MINT-7947479 -- ENSP00000382780 4 STRING: ENSP00000382780 -- O95766 2 MINT-7947479 -- ENSP00000360177 4 STRING: ENSP00000360177 -- ENSP00000382346 4 STRING: ENSP00000382346 -- O60289 2 MINT-7947479 -- P62960 2 MINT-6489539 -- ENSP00000211372 4 STRING: ENSP00000211372 -- ENSP00000410885 4 STRING: ENSP00000410885 -- Q86TR8 2 MINT-7947479 -- ENSP00000403175 4 STRING: ENSP00000403175 -- ENSP00000400635 4 STRING: ENSP00000400635 -- Q7Z6R0 2 MINT-7947479 -- ENSP00000412809 4 STRING: ENSP00000412809 -- ENSP00000411513 4 STRING: ENSP00000411513 -- ENSP00000375160 4 STRING: ENSP00000375160 -- ENSP00000397121 4 STRING: ENSP00000397121 -- ENSP00000395703 4 STRING: ENSP00000395703 -- ENSP00000389075 4 STRING: ENSP00000389075 -- ENSP00000375558 4 STRING: ENSP00000375558 -- ENSP00000349197 4 STRING: ENSP00000349197 -- ENSP00000394236 4 STRING: ENSP00000394236 -- ENSP00000412264 4 STRING: ENSP00000412264 -- Q6IPH7 2 MINT-6542674 -- ENSP00000348580 4 STRING: ENSP00000348580 -- ENSP00000401489 4 STRING: ENSP00000401489 -- ENSP00000350479 4 STRING: ENSP00000350479 -- Q8AZK7 2 MINT-6734039 -- Q9BQG0-2 2 MINT-6489539 -- Q9BTU2 2 MINT-7947479 -- ENSP00000412521 4 STRING: ENSP00000412521 -- ENSP00000386061 4 STRING: ENSP00000386061 -- ENSP00000344077 4 STRING: ENSP00000344077 -- ENSP00000390147 4 STRING: ENSP00000390147 -- ENSP00000387763 4 STRING: ENSP00000387763 -- Q13051 2 MINT-7947479 -- Q7Z48 M 2 MINT-7947479 -- ENSP00000387412 4 STRING: ENSP00000387412 -- ENSP00000398427 4 STRING: ENSP00000398427 -- Q9NXK9 2 MINT-7947479 -- ENSP00000261406 4 STRING: ENSP00000261406 -- ENSP00000395886 4 STRING: ENSP00000395886 -- ENSP00000352682 4 STRING: ENSP00000352682 -- ENSP00000397801 4 STRING: ENSP00000397801 -- ENSP00000407125 4 STRING: ENSP00000407125 -- Q13344 2 MINT-7947479 -- ENSP00000404192 4 STRING: ENSP00000404192 -- Q7Z612 2 MINT-6489539 -- ENSP00000277916 4 MINT-7947479 STRING: ENSP00000277916 -- ENSP00000233609 4 STRING: ENSP00000233609 -- Q9H6S7 2 MINT-7947479 -- ENSP00000384718 4 STRING: ENSP00000384718 -- XP_290345 2 MINT-7947479 -- Q13727 2 MINT-7947479 -- Q9UNL7 2 MINT-7947479 -- O43209 2 MINT-7947479 -- ENSP00000416110 4 STRING: ENSP00000416110 -- Q59EG8 2 MINT-6542674 -- Q8N1C0 2 MINT-7947479 -- ENSP00000351543 4 STRING: ENSP00000351543 -- A8K9D9 2 MINT-7947479
About this table Gene Ontology (GO): 5/14 biological process terms (GO ID links to tree view) (see all 14 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
TAS -- GO:0006412 translation
TAS -- GO:0006413 translational initiation
TAS -- GO:0006414 translational elongation
TAS -- GO:0006415 translational termination
TAS --
RPS13 for ontologies About GeneDecksing
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Drugs & Compoundsfor RPS13 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for RPS13 Search CenterWatch for drugs/clinical trials and news about RPS13 / RS13
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Transcriptsfor RPS13 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for RPS13 gene: NM_001017.2 Unigene Cluster for RPS13:
Ribosomal protein S13 Hs.446588 [show with all ESTs ] Unigene Representative Sequence: BE621497 10 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000531008 ENST00000531908 ENST00000228140 ENST00000526895 ENST00000525634 (uc001mmp.3 )ENST00000525828 ENST00000533969 ENST00000527571 ENST00000534329 ENST00000528074 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for RPS13 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for RPS13OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: RPS13 (NM_001017 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for RPS13 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat RPS13
Additional cDNA sequence: AK312060.1 BC000475.1 BC006772.1 BC029732.1 BC066322.1 BC100032.1 L01124.1 L05090.1 X79239.1
24/45 DOTS entries (see all 45 ): DT.100034195 DT.91780893
DT.91780905 DT.100060141 DT.95377158 DT.97814138 DT.100689183 DT.120736380 DT.100689171 DT.120736387 DT.100689181 DT.120736393 DT.100060137 DT.121431383 DT.100689168 DT.100689186 DT.120736385 DT.120736420 DT.121431378 DT.421641 DT.85101328 DT.91780895 DT.100689175 DT.120736415 24/1408 AceView cDNA sequences (see all 1408 ):
BM841621 BQ277838 T69927 AA381436 BM006169 CN485114 AI124967 NR_001452 F21917 CD677360 BG686936 CA843734 BM758837 AA317959 AW474405 CB113644 AV712079 AA353627 BQ353162 BF032207 BM817860 BG289197 BG474759 H80045 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for RPS13 About this scheme ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b · 3c · 3d ^ 4 ^ 5 ^ 6 SP1 :                         SP2 :             -   -   -         SP3 :                         SP4 :                         SP5 :                        
ECgene alternative splicing isoforms for RPS13
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Expression for RPS13 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section RPS13 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GTGTTGCACAAbout this image RPS13 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Ovary Primary Follicle Primary Oocyte Female Gametocytes, Germ Cells Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See RPS13 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for RPS13 SOURCE GeneReport for Unigene cluster: Hs.446588 SABiosciences Custom PCR Arrays for RPS13 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for RPS13Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse / rat RPS13 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat RPS13 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat RPS13
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Orthologsfor RPS13 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for RPS13 gene from 9/38 species (see all 38 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
mouse (Mus musculus)
Mammalia
Rps131 , 5
ribosomal protein S131, 5
86.98(n) 1 100(a) 1
 
7 (61.61 cM) 5 68052 1 NM_026533.3 1 NP_080809.1 1 116331507 5
chicken (Gallus gallus)
Aves
RPS131
ribosomal protein S13
81.68(n) 100(a)
 
414782 NM_001001783.1 NP_001001783.1
lizard (Anolis carolinensis)
Reptilia
RPS136
--
100(a)
1 ↔ 1
1(66624651-66629484)
African clawed frog (Xenopus laevis)
Amphibia
rps13-prov2
ribosomal protein S13
81.14(n)
 
BC056028.1
zebrafish (Danio rerio)
Actinopterygii
570848262
--
78.84(n)
 
57084826
fruit fly (Drosophila melanogaster)
Insecta
RpS131 , 3
protein biosynthesis structural constituent of more 3 Ribosomal protein S131
87(a) 3 71.08(n) 1 87.42(a) 1
 
2 29B23 34149 1 NM_001038796.2 1 NP_001033885.1 1
worm (Caenorhabditis elegans)
Secernentea
rps-131 , 3
40S ribosomal protein S133 Protein RPS-131
76(a) 3 68.43(n) 1 76.16(a) 1
 
III(6445813-6446906)3 175901 1 NM_065992.4 1 NP_498393.1 1
thale cress (Arabidopsis thaliana)
eudicotyledons
ATRPS13A6 AT3G607706
40S ribosomal protein S13-1
79(a) 78(a)
many → 1many → 1
4(37084-38312) 3(22460189-22461779)
rice (Oryza sativa)
Liliopsida
Os.151682
Oryza sativa (japonica cultivar-group) cDNA clone0 more
71.08(n)
 
AK059505.1
ENSEMBL Gene Tree for RPS13 (if available)TreeFam Gene Tree for RPS13 (if available)
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Paralogsfor RPS13 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for RPS13 gene 18/41 SIMAP similar genes for RPS13 using alignment to 3 protein entries: RS13_HUMAN (see all proteins )
(see all similar genes ):RRM2B EIF3G LSM12 C12orf76 UBXN4 ADCK1 EIF3K DOCK8 FLJ00047 EEF1E1 GALK2 PFKFB3 C21orf37 DYNC2LI1 COQ5 NCKAP1L SH2B3 RHBG
RPS13 for paralogs About GeneDecksing 5/11 Pseudogenes.org Pseudogenes for RPS13 (see all 11 )PGOHUM00000246797 PGOHUM00000247118 PGOHUM00000244031 PGOHUM00000245058 PGOHUM00000239991
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Genomic Variantsfor RPS13 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 11 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for RPS13 (17095936 - 17099334 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for RPS13: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing RPS13
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Disorders
/ Diseasesfor RPS13 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
RPS13 for disorders About GeneDecksing
OMIM gene information: 180476
OMIM disorders : --2 diseases for RPS13 : About MalaCards gastric cancer malaria 1 Novoseek disease relationship for RPS13 gene About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
tumors
0
2
16761435 (2)
Export disorders for RPS13 gene to outside databases
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Publicationsfor RPS13 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for RPS13 gene, integrated from 9 sources (see all 70 ): (articles sorted by number of sources associating them with RPS13) Utopia : connect your pdf to the dynamic world of online information
Cloning and analysis of the human S13 ribosomal protein cDNA. (PubMed id 8332508) 1 , 2 , 3 Chadeneau C.... Denis M.G. (1993) Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455) 1 , 2 Rush J.... Comb M.J. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) A map of 75 human ribosomal protein genes. (PubMed id 9582194) 1 , 3 Kenmochi N.... Page D.C. (1998) Characterization of the human small-ribosomal-subunit proteins by N- terminal and internal sequencing, and mass spectrometry. (PubMed id 8706699) 1 , 2 Vladimirov S.N.... Otto A. (1996) U14 snoRNAs are encoded in introns of human ribosomal protein S13 gene. (PubMed id 8920921) 1 , 2 Kenmochi N.... Tanaka T. (1996) Human ribosomal protein S13 regulates expression of its own gene at the splicing step by a feedback mechanism. (PubMed id 17881366) 1 , 9 Malygin A.A....Karpova G.G. (2007) Human ribosomal protein S13: cloning, expression, refolding, and structural stability. (PubMed id 15680243) 1 , 9 Malygin A....Karpova G. (2005) Ribosomal proteins S13 and L23 promote multidrug resistance in gastric cancer cells by suppressing drug-induced apoptosis. (PubMed id 15149863) 1 , 9 Shi Y....Fan D. (2004) The human EKC/KEOPS complex is recruited to Cullin2 ub iquitin ligases by the human tumour antigen PRAME. (PubMed id 22912744) 1 Costessi A....Stunnenberg H.G. (2012)
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External Searches for RPS13 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing RPS13 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing RPS13 gene
(According to HUGE )
About This Section --
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Specialized Databases showing RPS13 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for RPS13 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for RPS13 gene: Search GeneIP for patents involving RPS13 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor RPS13 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for RPS13 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for RPS13 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for RPS13 OriGene Protein Over-expression Lysate for RPS13 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for RPS13 Browse 3'-UTR reporter clones for miRNA target validation OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for RPS13 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for RPS13 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for RPS13 OriGene Custom Protein Services for RPS13 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat RPS13 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing RPS13 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat RPS13 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat RPS13 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat RPS13 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat RPS13
Search Tocris compounds for RPS13
RPS13 Proteins, Antibodies, CLIAs, and ELISAs
ThermoFisher Antibody for RPS13
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat RPS13
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