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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

RPS13 Gene

protein-coding   GIFtS: 62
GCID: GC11M017055

Ribosomal Protein S13

Microbiology & Infectious Diseases Congress
  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

Aliases
Ribosomal Protein S131 2
40S Ribosomal Protein S131 2
S132

External Ids:    HGNC: 103861   Entrez Gene: 62072   Ensembl: ENSG000001107007   OMIM: 1804765   UniProtKB: P622773   

Export aliases for RPS13 gene to outside databases

Previous GC identifers: GC11M018166 GC11M018039 GC11M017135 GC11M017060 GC11M017054 GC11M016780


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for RPS13 Gene:
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit.
Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This
gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S15P family
of ribosomal proteins. It is located in the cytoplasm. The protein has been shown to bind to the 5.8S rRNA in
rat. The gene product of the E. coli ortholog (ribosomal protein S15) functions at early steps in ribosome
assembly. This gene is co-transcribed with two U14 small nucleolar RNA genes, which are located in its third and
fifth introns. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of
this gene dispersed through the genome. (provided by RefSeq, Jul 2008)

GeneCards Summary for RPS13 Gene: 
RPS13 (ribosomal protein S13) is a protein-coding gene. Diseases associated with RPS13 include influenza, and gastric cancer, and among its related super-pathways are Eukaryotic Translation Initiation and Formation of the ternary complex, and subsequently, the 43S complex. GO annotations related to this gene include structural constituent of ribosome and mRNA binding.

Gene Wiki entry for RPS13 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000011.9  NC_018922.2  NT_009237.18  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the RPS13 gene promoter:
         Nkx3-1   AP-2rep   p53   AP-1   Nkx3-1 v1   YY1   GATA-1   Nkx3-1 v2   Ik-2   Nkx3-1 v3   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidRPS13 promoter sequence
   Search SABiosciences Chromatin IP Primers for RPS13

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RPS13


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11p15   Ensembl cytogenetic band:  11p15.1   HGNC cytogenetic band: 11p

RPS13 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RPS13 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11M017055:  view genomic region     (about GC identifiers)

Start:
17,095,936 bp from pter      End:
17,099,334 bp from pter
Size:
3,399 bases      Orientation:
minus strand

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: RS13_HUMAN, P62277 (See protein sequence)
Recommended Name: 40S ribosomal protein S13  
Size: 151 amino acids; 17222 Da
1 PDB 3D structure from and Proteopedia for RPS13:
3J3A (3D)    
Secondary accessions: B2R549 P19116 Q02546 Q29200 Q498Y0

Explore the universe of human proteins at neXtProt for RPS13: NX_P62277

Explore proteomics data for RPS13 at MOPED 

Post-translational modifications:

  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_P62277

  • RPS13 Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    RPS13 Protein Expression
    REFSEQ proteins: NP_001008.1  
    ENSEMBL proteins: 
     ENSP00000228140   ENSP00000435777   ENSP00000432096  
    Reactome Protein details: P62277
    Human Recombinant Protein Products for RPS13: 
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    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for RPS13 

    Gene Ontology (GO): 6 cellular component terms (GO ID links to tree view) (see first 5):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular ----
    GO:0005634nucleus IDA17881366
    GO:0005730nucleolus IDA17881366
    GO:0005829cytosol TAS--
    GO:0005840ribosome NAS8332508
    GO:0022627cytosolic small ribosomal subunit IDA15883184

    RPS13 for ontologies           About GeneDecksing



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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    HGNC Gene Families: 
    RPS: S ribosomal proteins

    4 InterPro protein domains:
     IPR023029 Ribosomal_S15P
     IPR012606 Ribosomal_S13/S15_N
     IPR000589 Ribosomal_S15
     IPR009068 S15_NS1_RNA-bd

    Graphical View of Domain Structure for InterPro Entry P62277

    ProtoNet protein and cluster: P62277

    1 Blocks protein domain: IPB012606 Ribosomal S13S15 N-terminal

    UniProtKB/Swiss-Prot: RS13_HUMAN, P62277
    Similarity: Belongs to the ribosomal protein S15P family


    RPS13 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section

    Molecular Function:
         Genatlas biochemistry entry for RPS13:
    60S ribosomal protein S13

         Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003729mRNA binding IDA17881366
    GO:0003735structural constituent of ribosome IEA--
    GO:0005515protein binding IPI12054647
         
    RPS13 for ontologies           About GeneDecksing


    Phenotypes:
         7 GenomeRNAi human phenotypes for RPS13:
     Decreased Hepatitis C virus re  Decreased cell number  Decreased viability  Decreased viability of wild-ty 
     Increased cell number in G2M,   Nuclear 40S maturation defects  Nucleolar pre-40S maturation d 

    Animal Models:
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section

    SuperPaths for RPS13 About   (see all 7)                                                                                              See pathways by source

    SuperPathSelected contained pathways About (see all per SuperPath)
    1Viral mRNA Translation
    Influenza Life Cycle0.95
    3' -UTR-mediated translational regulation0.93
    Influenza Infection0.95
    L13a-mediated translational silencing of Ceruloplasmin expression0.93
    Nonsense Mediated Decay Independent of the Exon Junction Complex0.94
    Formation of a pool of free 40S subunits0.90
    Eukaryotic Translation Termination0.94
    Nonsense-Mediated Decay0.84
    2Translation initiation complex formation
    Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S0.95
    Formation of the ternary complex, and subsequently, the 43S complex0.87
    Ribosomal scanning and start codon recognition0.95
    Translation initiation complex formation0.87
    3Metabolism of mRNA
    Metabolism of mRNA0.92
    Metabolism of RNA0.92
    4Generic Transcription Pathway
    Gene Expression0.47
    5Asparagine N-linked glycosylation
    Metabolism of proteins0.35

    Pathways by source                                                                                                                                                                 See SuperPaths
    Show all pathways


    1 GeneGo (Thomson Reuters) Pathway for RPS13
        CFTR translational fidelity (class I mutations)

    2 BioSystems Pathways for RPS13
        Cytoplasmic Ribosomal Proteins
    TNF-alpha/NF-kB Signaling Pathway

    5/27        Reactome Pathways for RPS13 (see all 27)
        Formation of the ternary complex, and subsequently, the 43S complex
    Nonsense Mediated Decay Independent of the Exon Junction Complex
    Nonsense-Mediated Decay
    Translation
    SRP-dependent cotranslational protein targeting to membrane


    1         Kegg Pathway  (Kegg details for RPS13):
        Ribosome


    RPS13 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for RPS13

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/984 Interacting proteins for RPS13 (P622771, 2, 3 ENSP000002281404) via UniProtKB, MINT, STRING, and/or I2D (see all 984)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    RPL8P629172, 3, ENSP000002625844MINT-6542674 MINT-6489539 MINT-6488791 I2D: score=2 STRING: ENSP00000262584
    RPL11P629132, 3, ENSP000003636764MINT-6542674 MINT-6489539 MINT-6488791 I2D: score=1 STRING: ENSP00000363676
    RPL12P300502, 3, ENSP000003547394MINT-6542674 MINT-6489539 MINT-6488791 I2D: score=1 STRING: ENSP00000354739
    RPL13P263732, 3, ENSP000003078894MINT-6542674 MINT-7947479 MINT-6488791 I2D: score=1 STRING: ENSP00000307889
    RPL26P612542, 3, ENSP000002938424MINT-6542674 MINT-6489539 MINT-6488791 I2D: score=1 STRING: ENSP00000293842
    About this table

    Gene Ontology (GO): 5/14 biological process terms (GO ID links to tree view) (see all 14):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS--
    GO:0006412translation TAS--
    GO:0006413translational initiation TAS--
    GO:0006414translational elongation TAS--
    GO:0006415translational termination TAS--

    RPS13 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for RPS13 (RS13)

    Search CenterWatch for drugs/clinical trials and news about RPS13 / RS13

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for RPS13 gene: 
    NM_001017.2  

    Unigene Cluster for RPS13:

    Ribosomal protein S13
    Hs.446588  [show with all ESTs]
    Unigene Representative Sequence: BE621497
    10 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000531008 ENST00000531908 ENST00000228140 ENST00000526895 ENST00000525634(uc001mmp.3)
    ENST00000525828 ENST00000533969 ENST00000527571 ENST00000534329 ENST00000528074

    Congresses - knowledge worth sharing:  
    European Congress of Clinical Microbiology and Infectious Diseases (ECCMID) 10 - 13 May 2014

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    Additional mRNA sequence: 

    AK312060.1 BC000475.1 BC006772.1 BC029732.1 BC066322.1 BC100032.1 L01124.1 L05090.1 
    X79239.1 

    24/45 DOTS entries (see all 45):

    DT.100034195  DT.91780893  DT.91780905  DT.100060141  DT.95377158  DT.97814138  DT.100689183  DT.120736380 
    DT.100689171  DT.120736387  DT.100689181  DT.120736393  DT.100060137  DT.121431383  DT.100689168  DT.100689186 
    DT.120736385  DT.120736420  DT.121431378  DT.421641  DT.85101328  DT.91780895  DT.100689175  DT.120736415 

    24/1408 AceView cDNA sequences (see all 1408):

    BQ637792 AA664797 BE257429 AI735018 BQ066459 BF219980 AW517778 AJ714660 
    BU579524 AI459647 AV653075 AA725541 BI760789 BQ879436 BU789291 BU625492 
    BM741601 BQ432432 BM799019 BE258513 AI720395 AA331024 BU146792 BQ029243 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for RPS13    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b · 3c · 3d ^ 4 ^ 5 ^ 6
    SP1:                                                                        
    SP2:                                      -     -     -                     
    SP3:                                                                        
    SP4:                                                                        
    SP5:                                                                        


    ECgene alternative splicing isoforms for RPS13

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    RPS13 expression in normal human tissues (normalized intensities)      RPS13 embryonic expression: see
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: GTGTTGCACA
    RPS13 Expression
    About this image


    RPS13 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database 
     5/3 selected tissues (see all 3) fully expand
     
     Ovary (Reproductive System)
             Primary Oocyte Primary Follicle
     
     Gonad
             Primary Oocyte Primary Follicle
     
     Umbilical Cord (Extraembryonic Tissues)

    See RPS13 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for RPS13

    SOURCE GeneReport for Unigene cluster: Hs.446588
        SABiosciences Custom PCR Arrays for RPS13
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    In Situ
    Assay Products:
     

     
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for RPS13 gene from 10/25 species (see all 25)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Rps131 , 5 ribosomal protein S131, 5 86.98(n)1
    100(a)1
      7 (61.61 cM)5
    680521  NM_026533.31  NP_080809.11 
     1163315075 
    chicken
    (Gallus gallus)
    Aves RPS131 ribosomal protein S13 81.68(n)
    100(a)
      414782  NM_001001783.1  NP_001001783.1 
    lizard
    (Anolis carolinensis)
    Reptilia RPS136
    Uncharacterized protein
    100(a)
    1 ↔ 1
    1(66622601-66629484)
    African clawed frog
    (Xenopus laevis)
    Amphibia rps13-prov2 ribosomal protein S13 81.14(n)    BC056028.1 
    zebrafish
    (Danio rerio)
    Actinopterygii 570848262   -- 78.84(n)    57084826 
    fruit fly
    (Drosophila melanogaster)
    Insecta RpS131 , 3 protein biosynthesis structural
    constituent of more3
    Ribosomal protein S131
    87(a)3
    71.08(n)1
    87.42(a)1
      2 29B23
    341491  NM_001038796.21  NP_001033885.11 
    worm
    (Caenorhabditis elegans)
    Secernentea rps-131 , 3 40S ribosomal protein S133
    Protein RPS-131
    76(a)3
    68.43(n)1
    76.16(a)1
      III(6445813-6446906)3
    1759011  NM_065992.41  NP_498393.11 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes RPS13(YDR064W)4 Protein component of the small (40S) ribosomal subunit; more   --   4(579458-580452) 851636  NP_010349.1 
    soybean
    (Glycine max)
    eudicotyledons 467773542   -- 71.11(n)  
    rice
    (Oryza sativa)
    Liliopsida Os.151682 Oryza sativa (japonica cultivar-group) cDNA clone0 more 71.08(n)    AK059505.1 


    ENSEMBL Gene Tree for RPS13 (if available)
    TreeFam Gene Tree for RPS13 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for RPS13 gene
    18/48 SIMAP similar genes for RPS13 using alignment to 3 protein entries:     RS13_HUMAN (see all proteins) (see all similar genes):
    RRM2B    EIF3G    LSM12    C12orf76    UBXN4    ADCK1
    EIF3K    DOCK8    TNNT1    FLJ00047    ZNF799    EEF1E1
    GALK2    PFKFB3    C21orf37    DYNC2LI1    COQ5    VPS33A

    RPS13 for paralogs           About GeneDecksing


    5/11 Pseudogenes.org Pseudogenes for RPS13 (see all 11)
    PGOHUM00000246797 PGOHUM00000247118 PGOHUM00000244031 PGOHUM00000245058 PGOHUM00000239991


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/37 SNPs in RPS13 are shown (see all 37)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 11 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs110241471,2
    C,F,A,H--17095565(+) ATTACT/GTTTGC 1 -- ds500110Minor allele frequency- G:0.20NS EA WA CSA 786
    rs169248991,2
    C,F,H--17095596(+) TCTGAT/CGCTAC 1 -- ds500127Minor allele frequency- C:0.18NA NS EA CSA WA EU 3425
    rs1882470661,2
    --17095686(+) ATGACA/GCCAAA 1 -- ds50010--------
    rs1168494251,2
    C,F--17095699(+) AAACAC/AAAAGG 1 -- ds50011Minor allele frequency- A:0.02EA 120
    rs728708891,2
    C,F--17099600(+) ACTAGA/TTCCCT 1 -- us2k12Minor allele frequency- T:0.01NA NS 270
    rs169338231,2
    C,F,H--17099613(+) GAGTCG/AGCCCT 1 -- us2k121Minor allele frequency- A:0.17NA NS EA WA 2630
    rs1932727781,2
    C--17099615(+) GTCGGC/TCCTGC 1 -- us2k10--------
    rs605342231,2
    C,F--17099803(+) TGCCTG/ACCGCC 1 -- us2k11Minor allele frequency- A:0.50WA 2
    rs1141697421,2
    F--17099857(+) CTCGCC/TGGGGA 1 -- us2k11Minor allele frequency- T:0.03WA 118
    rs110241501,2
    C,F,A--17100265(+) CGCCTC/GGGCCT 1 -- us2k11Minor allele frequency- G:0.02NS 150

    HapMap Linkage Disequilibrium report for RPS13 (17095936 - 17099334 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 1 variation for RPS13:    About this table     
    Variant IDTypeSubtypePubMed ID
    nsv467711CNV Gain19166990

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    OMIM gene information: 180476    OMIM disorders: --

    3 diseases for RPS13:    About MalaCards
    influenza    gastric cancer    breast cancer


    RPS13 for disorders           About GeneDecksing

    1 Novoseek inferred disease relationship for RPS13 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tumors 0 2 16761435 (2)


    Export disorders for RPS13 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for RPS13 gene, integrated from 9 sources (see all 79):
    (articles sorted by number of sources associating them with RPS13)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Cloning and analysis of the human S13 ribosomal protein cDNA. (PubMed id 8332508)1, 2, 3 Chadeneau C.... Denis M.G. (1993)
    2. Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455)1, 2 Rush J.... Comb M.J. (2005)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    4. A map of 75 human ribosomal protein genes. (PubMed id 9582194)1, 3 Kenmochi N.... Page D.C. (1998)
    5. Characterization of the human small-ribosomal-subunit proteins by N- terminal and internal sequencing, and mass spectrometry. (PubMed id 8706699)1, 2 Vladimirov S.N.... Otto A. (1996)
    6. U14 snoRNAs are encoded in introns of human ribosomal protein S13 gene. (PubMed id 8920921)1, 2 Kenmochi N.... Tanaka T. (1996)
    7. Human ribosomal protein S13 regulates expression of its own gene at the splicing step by a feedback mechanism. (PubMed id 17881366)1, 9 Malygin A.A....Karpova G.G. (2007)
    8. Human ribosomal protein S13: cloning, expression, refolding, and structural stability. (PubMed id 15680243)1, 9 Malygin A....Karpova G. (2005)
    9. Ribosomal proteins S13 and L23 promote multidrug resistance in gastric cancer cells by suppressing drug-induced apoptosis. (PubMed id 15149863)1, 9 Shi Y....Fan D. (2004)
    10. The intracellular interactome of tetraspanin-enriched microdomains reveals their function as sorting machineries toward exosomes. (PubMed id 23463506)1 Perez-Hernandez D....Yanez-Mo M. (2013)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 6207 HGNC: 10386 AceView: RPS13 Ensembl:ENSG00000110700 euGenes: HUgn6207
    ECgene: RPS13 Kegg: 6207 H-InvDB: RPS13

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for RPS13 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for RPS13 gene:
    Search GeneIP for patents involving RPS13

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 4 Nov 2013 , 7 Nov 2013 , 23 Jan 2014

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