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RPS12P7 Gene(Pseudogene)

Ribosomal Protein S12 Pseudogene 7

GCID:
GC03P158496
GIFtS:
11
Genes Participants
UDN Logo

Aliases for RPS12P7 Gene

Subcategory (RNA class) for RPS12P7 Gene

lncRNA

Aliases for RPS12P7 Gene

  • Ribosomal Protein S12 Pseudogene 7 2 3
  • RPS12_3_426 3
  • AC106707.2 5

External Ids for RPS12P7 Gene

ORGUL Members for RPS12P7 Gene

Previous GeneCards Identifiers for RPS12P7 Gene

  • GC03U901198
  • GC03P158215

Summaries for RPS12P7 Gene

GeneCards Summary for RPS12P7 Gene

RPS12P7 (Ribosomal Protein S12 Pseudogene 7) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS12P7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS12P7 Gene

Genomics for RPS12P7 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPS12P7 Gene

Promoters and enhancers for RPS12P7 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH03I158528 Enhancer 0.8 VISTA UCNEbase 0.3 +31.9 31866 0.7 RCOR1 CHD2 MLF1 RSRC1 RPS12P7 LOC100996447
GH03I158508 Enhancer 0.5 FANTOM5 0.4 +12.3 12342 0.3 GATA3 RFX1 CREB1 ZBTB33 FOS RPS12P7 LOC100996447 RSRC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS12P7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS12P7 Gene

Genomic Locations for RPS12P7 Gene
chr3:158,496,561-158,496,934
(GRCh38/hg38)
Size:
374 bases
Orientation:
Plus strand
chr3:158,214,350-158,214,723
(GRCh37/hg19)

Genomic View for RPS12P7 Gene

Genes around RPS12P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS12P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS12P7 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS12P7 Gene

Proteins for RPS12P7 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS12P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS12P7 Gene

Domains & Families for RPS12P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS12P7 Gene

Function for RPS12P7 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS12P7 Gene

Localization for RPS12P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS12P7 Gene

Pathways & Interactions for RPS12P7 Gene

SuperPathways for RPS12P7 Gene

PathCards logo More details on SuperPathways for RPS12P7
No Data Available

Interacting Proteins for RPS12P7 Gene

Gene Ontology (GO) - Biological Process for RPS12P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS12P7 Gene

Drugs & Compounds for RPS12P7 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS12P7 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS12P7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS12P7 Gene

No ASD Table

Relevant External Links for RPS12P7 Gene

GeneLoc Exon Structure for
RPS12P7
ECgene alternative splicing isoforms for
RPS12P7

Expression for RPS12P7 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS12P7 Gene

mRNA expression in normal human tissues for RPS12P7 Gene
mRNA expression by GTEx for RPS12P7 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS12P7 Gene:

RPS12P7
genes like me logo Genes that share expression patterns with RPS12P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS12P7 Gene

Orthologs for RPS12P7 Gene

Evolution for RPS12P7 Gene

ENSEMBL:
Gene Tree for RPS12P7 (if available)
TreeFam:
Gene Tree for RPS12P7 (if available)

No data available for Orthologs for RPS12P7 Gene

Paralogs for RPS12P7 Gene

No data available for Paralogs for RPS12P7 Gene

Variants for RPS12P7 Gene

Additional Variant Information for RPS12P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS12P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS12P7 Gene

Disorders for RPS12P7 Gene

Additional Disease Information for RPS12P7

Genetic Association Database
(GAD)

No disorders were found for RPS12P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS12P7 Gene

Publications for RPS12P7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS12P7 Gene

Sources for RPS12P7 Gene

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