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Aliases for RPS12P29 Gene

Aliases for RPS12P29 Gene

  • Ribosomal Protein S12 Pseudogene 29 2 3
  • RPS12_15_1507 3
  • RP11-314A20.1 5

External Ids for RPS12P29 Gene

Previous GeneCards Identifiers for RPS12P29 Gene

  • GC17M004557
  • GC17U901184
  • GC17M004609
  • GC17M004610

Summaries for RPS12P29 Gene

GeneCards Summary for RPS12P29 Gene

RPS12P29 (Ribosomal Protein S12 Pseudogene 29) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS12P29 Gene

Genomics for RPS12P29 Gene

Regulatory Elements for RPS12P29 Gene

Enhancers for RPS12P29 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G004847 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -144.3 -144333 4.4 PKNOX1 ZBTB40 RAD21 RFX5 RARA RCOR1 FOS THAP11 CEBPB NR2F2 CHRNE ENO3 PFN1 ZMYND15 ARRB2 C17orf107 PLD2 CXCL16 RPS12P29 PELP1
GH17G004856 1.5 Ensembl ENCODE dbSUPER 12.1 -153.5 -153477 5.3 FOXA2 ATF1 MLX ARID4B DMAP1 ZNF48 YY1 ETS1 TCF12 GATA2 CHRNE C17orf107 ZFP3 MINK1 PLD2 ARRB2 LOC101559451 PELP1 RPS12P29 ENO3
GH17G004842 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -139.2 -139202 3.4 PKNOX1 HLF CEBPB GATA2 ZNF341 PBX2 EED ETV6 PRDM10 NFE2 CHRNE ARRB2 ZMYND15 CXCL16 C17orf107 PLD2 ENO3 PSMB6 VMO1 GLTPD2
GH17G004846 0.8 ENCODE dbSUPER 11.7 -141.6 -141642 0.2 SAP130 NR2F1 ZNF24 NR2F6 ZNF48 PLD2 GLTPD2 ARRB2 LOC101559451 PELP1 RPS12P29 VMO1 ZMYND15 CXCL16 ATP6V0CP1
GH17G005209 1.2 Ensembl ENCODE dbSUPER 5.3 -505.7 -505660 2.9 BHLHE40 MAX NSD2 EBF1 ZBTB40 EP300 RAD51 POLR2A TARDBP IKZF1 RABEP1 ENSG00000263164 USP6 CAMTA2 SCIMP RPS12P29 PIR60028 LOC100130950
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS12P29 on UCSC Golden Path with GeneCards custom track

Promoters for RPS12P29 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000090521 1099 1601 HDGF HNRNPUL1 PKNOX1 MLX CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1

Genomic Location for RPS12P29 Gene

Chromosome:
17
Start:
4,704,799 bp from pter
End:
4,705,299 bp from pter
Size:
501 bases
Orientation:
Minus strand

Genomic View for RPS12P29 Gene

Genes around RPS12P29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS12P29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS12P29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS12P29 Gene

Proteins for RPS12P29 Gene

Post-translational modifications for RPS12P29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS12P29 Gene

Domains & Families for RPS12P29 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS12P29 Gene

Function for RPS12P29 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS12P29 Gene

Localization for RPS12P29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS12P29 Gene

Pathways & Interactions for RPS12P29 Gene

SuperPathways for RPS12P29 Gene

No Data Available

Interacting Proteins for RPS12P29 Gene

Gene Ontology (GO) - Biological Process for RPS12P29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS12P29 Gene

Transcripts for RPS12P29 Gene

mRNA/cDNA for RPS12P29 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS12P29 Gene

No ASD Table

Relevant External Links for RPS12P29 Gene

GeneLoc Exon Structure for
RPS12P29
ECgene alternative splicing isoforms for
RPS12P29

Expression for RPS12P29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS12P29 Gene

mRNA expression in normal human tissues for RPS12P29 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS12P29 Gene:

RPS12P29
genes like me logo Genes that share expression patterns with RPS12P29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS12P29 Gene

Orthologs for RPS12P29 Gene

Evolution for RPS12P29 Gene

ENSEMBL:
Gene Tree for RPS12P29 (if available)
TreeFam:
Gene Tree for RPS12P29 (if available)

No data available for Orthologs for RPS12P29 Gene

Paralogs for RPS12P29 Gene

No data available for Paralogs for RPS12P29 Gene

Variants for RPS12P29 Gene

Relevant External Links for RPS12P29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS12P29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS12P29 Gene

Disorders for RPS12P29 Gene

No disorders were found for RPS12P29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS12P29 Gene

Publications for RPS12P29 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS12P29 Gene

Sources for RPS12P29 Gene

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