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Aliases for RPS12P25 Gene

Subcategory (RNA class) for RPS12P25 Gene

lncRNA

Aliases for RPS12P25 Gene

  • Ribosomal Protein S12 Pseudogene 25 2 3
  • RPS12_14_1457 3
  • AC026826.1 5

External Ids for RPS12P25 Gene

ORGUL Members for RPS12P25 Gene

Previous GeneCards Identifiers for RPS12P25 Gene

  • GC15M077830
  • GC15M080045

Summaries for RPS12P25 Gene

GeneCards Summary for RPS12P25 Gene

RPS12P25 (Ribosomal Protein S12 Pseudogene 25) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS12P25 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS12P25 Gene

Genomics for RPS12P25 Gene

Regulatory Elements for RPS12P25 Gene

Enhancers for RPS12P25 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H079744 0.7 Ensembl 0.4 +7.3 7349 0 TBP BDP1 SREBF2 ZNF10 DEAF1 ZBTB40 ZNF592 ZFHX2 POLR3A EGR1 TRC-GCA5-1 RPS12P25
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS12P25 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS12P25 Gene

Chromosome:
15
Start:
79,751,666 bp from pter
End:
79,752,049 bp from pter
Size:
384 bases
Orientation:
Minus strand

Genomic View for RPS12P25 Gene

Genes around RPS12P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS12P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS12P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS12P25 Gene

Proteins for RPS12P25 Gene

Post-translational modifications for RPS12P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS12P25 Gene

Domains & Families for RPS12P25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS12P25 Gene

Function for RPS12P25 Gene

Phenotypes From GWAS Catalog for RPS12P25 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS12P25
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS12P25 Gene

Localization for RPS12P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS12P25 Gene

Pathways & Interactions for RPS12P25 Gene

SuperPathways for RPS12P25 Gene

No Data Available

Interacting Proteins for RPS12P25 Gene

Gene Ontology (GO) - Biological Process for RPS12P25 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS12P25 Gene

Drugs & Compounds for RPS12P25 Gene

No Compound Related Data Available

Transcripts for RPS12P25 Gene

mRNA/cDNA for RPS12P25 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS12P25
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS12P25 Gene

No ASD Table

Relevant External Links for RPS12P25 Gene

GeneLoc Exon Structure for
RPS12P25
ECgene alternative splicing isoforms for
RPS12P25

Expression for RPS12P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS12P25 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS12P25 Gene:

RPS12P25
genes like me logo Genes that share expression patterns with RPS12P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS12P25 Gene

Orthologs for RPS12P25 Gene

Evolution for RPS12P25 Gene

ENSEMBL:
Gene Tree for RPS12P25 (if available)
TreeFam:
Gene Tree for RPS12P25 (if available)

No data available for Orthologs for RPS12P25 Gene

Paralogs for RPS12P25 Gene

No data available for Paralogs for RPS12P25 Gene

Variants for RPS12P25 Gene

Relevant External Links for RPS12P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS12P25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS12P25 Gene

Disorders for RPS12P25 Gene

Relevant External Links for RPS12P25

Genetic Association Database (GAD)
RPS12P25

No disorders were found for RPS12P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS12P25 Gene

Publications for RPS12P25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60

Products for RPS12P25 Gene

Sources for RPS12P25 Gene

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