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Aliases for RPS12P21 Gene

Aliases for RPS12P21 Gene

  • Ribosomal Protein S12 Pseudogene 21 2 3
  • RPS12_11_1175 3

External Ids for RPS12P21 Gene

Previous GeneCards Identifiers for RPS12P21 Gene

  • GC11U901283
  • GC11P112090

Summaries for RPS12P21 Gene

GeneCards Summary for RPS12P21 Gene

RPS12P21 (Ribosomal Protein S12 Pseudogene 21) is a Pseudogene.

Additional gene information for RPS12P21 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS12P21 Gene

Genomics for RPS12P21 Gene

GeneHancer (GH) Regulatory Elements for RPS12P21 Gene

Promoters and enhancers for RPS12P21 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I112219 Enhancer 0.9 Ensembl ENCODE 550.8 +1.7 1655 0.6 HDGF CTCF PKNOX1 ZNF2 RAD21 CC2D1A ZNF335 ARID2 ZNF207 SMC3 GC11P112220 RPS12P21 PTS BCO2
GH11I112216 Enhancer 0.7 ENCODE 550.8 -1.6 -1611 0.2 FOXA2 RXRA MAX CEBPB REST EP300 RAD21 FOXA1 NR2F2 GABPA GC11P112220 RPS12P21 RNU6-44P MRPS36P4 BCO2
GH11I112270 Enhancer 0.7 ENCODE 12.8 +52.6 52603 0.6 ATF1 ETV1 TAL1 E4F1 TCF12 POLR2B CTBP1 ZNF316 PHF20 FOXK2 LOC283140 GC11M112270 PTS RPS12P21 RNU6-44P GC11P112339
GH11I112213 Enhancer 0.8 ENCODE 0.8 -4.2 -4221 0.1 FOXA2 RARA RFX5 YY1 RCOR1 HMG20B RXRA CEBPB NFIL3 CEBPA RPS12P21 MRPS36P4 BCO2
GH11I112212 Enhancer 0.2 ENCODE 0.4 -5.7 -5662 0.8 BCO2 MRPS36P4 RPS12P21
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS12P21 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS12P21 Gene

Genomic Locations for RPS12P21 Gene
chr11:112,218,244-112,218,737
(GRCh38/hg38)
Size:
494 bases
Orientation:
Plus strand
chr11:112,089,049-112,089,443
(GRCh37/hg19)

Genomic View for RPS12P21 Gene

Genes around RPS12P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS12P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS12P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS12P21 Gene

Proteins for RPS12P21 Gene

Post-translational modifications for RPS12P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS12P21 Gene

Domains & Families for RPS12P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS12P21 Gene

Function for RPS12P21 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS12P21 Gene

Localization for RPS12P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS12P21 Gene

Pathways & Interactions for RPS12P21 Gene

SuperPathways for RPS12P21 Gene

No Data Available

Interacting Proteins for RPS12P21 Gene

Gene Ontology (GO) - Biological Process for RPS12P21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS12P21 Gene

Drugs & Compounds for RPS12P21 Gene

No Compound Related Data Available

Transcripts for RPS12P21 Gene

mRNA/cDNA for RPS12P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS12P21 Gene

No ASD Table

Relevant External Links for RPS12P21 Gene

GeneLoc Exon Structure for
RPS12P21
ECgene alternative splicing isoforms for
RPS12P21

Expression for RPS12P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS12P21 Gene

mRNA differential expression in normal tissues according to GTEx for RPS12P21 Gene

This gene is overexpressed in Heart - Left Ventricle (x7.9), Liver (x5.8), and Heart - Atrial Appendage (x5.4).

NURSA nuclear receptor signaling pathways regulating expression of RPS12P21 Gene:

RPS12P21
genes like me logo Genes that share expression patterns with RPS12P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS12P21 Gene

Orthologs for RPS12P21 Gene

Evolution for RPS12P21 Gene

ENSEMBL:
Gene Tree for RPS12P21 (if available)
TreeFam:
Gene Tree for RPS12P21 (if available)

No data available for Orthologs for RPS12P21 Gene

Paralogs for RPS12P21 Gene

No data available for Paralogs for RPS12P21 Gene

Variants for RPS12P21 Gene

Additional Variant Information for RPS12P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS12P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS12P21 Gene

Disorders for RPS12P21 Gene

No disorders were found for RPS12P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS12P21 Gene

Publications for RPS12P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS12P21 Gene

Sources for RPS12P21 Gene

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