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Aliases for RPS12P20 Gene

Subcategory (RNA class) for RPS12P20 Gene

antisense

Aliases for RPS12P20 Gene

  • Ribosomal Protein S12 Pseudogene 20 2 3 5
  • RPS12_10_1153 3

External Ids for RPS12P20 Gene

ORGUL Members for RPS12P20 Gene

Previous GeneCards Identifiers for RPS12P20 Gene

  • GC11U901252
  • GC11P072420

Summaries for RPS12P20 Gene

GeneCards Summary for RPS12P20 Gene

RPS12P20 (Ribosomal Protein S12 Pseudogene 20) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS12P20 Gene

Genomics for RPS12P20 Gene

Regulatory Elements for RPS12P20 Gene

Enhancers for RPS12P20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G072762 1.6 FANTOM5 ENCODE dbSUPER 11.4 +57.1 57126 5.6 PKNOX1 FOXA2 MLX ARID4B DMAP1 ZNF48 ZNF121 FOS SP5 MXD4 ARAP1 STARD10 ATG16L2 RPS12P20 ARAP1-AS2 PDE2A ARAP1-AS1 RNU6-672P GC11P072768 PIR40050
GH11G072757 1.5 Ensembl ENCODE dbSUPER 11.4 +50.7 50687 1.9 HDGF PKNOX1 ATF1 CREB3L1 ARNT GLI4 GLIS2 FOS NCOA1 REST ARAP1 STARD10 RPS12P20 ARAP1-AS2 ATG16L2 ARAP1-AS1 PDE2A RNU6-672P PIR40050 GC11P072768
GH11G072750 1.3 ENCODE dbSUPER 12.2 +44.3 44273 4.0 HDGF PKNOX1 MLX AGO1 ARID4B SIN3A DMAP1 ZNF48 ZNF121 GLIS2 ARAP1 RPS12P20 ARAP1-AS2 STARD10 PIR40050
GH11G073287 1.5 Ensembl ENCODE dbSUPER 10 +580.5 580508 3.1 HDGF PKNOX1 ATF1 CREB3L1 ARID4B SIN3A DMAP1 YBX1 ZNF2 ZNF48 P2RY6 ENSG00000257038 ARAP1 ARAP1-AS2 RPS12P20 ARHGEF17
GH11G072821 1.2 ENCODE dbSUPER 12.2 +114.2 114212 1.6 HNRNPUL1 CREB3L1 AGO1 SIN3A ZNF2 GLIS2 ELK1 SP3 TAF15 GTF2B LOC100133315 LOC100128494 ARAP1 RPS12P20 ARAP1-AS2 RNU6-672P ARAP1-AS1 OR7E128P ATG16L2 GC11M072870
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS12P20 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS12P20 Gene

Chromosome:
11
Start:
72,708,186 bp from pter
End:
72,708,565 bp from pter
Size:
380 bases
Orientation:
Plus strand

Genomic View for RPS12P20 Gene

Genes around RPS12P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS12P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS12P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS12P20 Gene

Proteins for RPS12P20 Gene

Post-translational modifications for RPS12P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS12P20 Gene

Domains & Families for RPS12P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS12P20 Gene

Function for RPS12P20 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS12P20 Gene

Localization for RPS12P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS12P20 Gene

Pathways & Interactions for RPS12P20 Gene

SuperPathways for RPS12P20 Gene

No Data Available

Interacting Proteins for RPS12P20 Gene

Gene Ontology (GO) - Biological Process for RPS12P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS12P20 Gene

Drugs & Compounds for RPS12P20 Gene

No Compound Related Data Available

Transcripts for RPS12P20 Gene

mRNA/cDNA for RPS12P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS12P20 Gene

No ASD Table

Relevant External Links for RPS12P20 Gene

GeneLoc Exon Structure for
RPS12P20
ECgene alternative splicing isoforms for
RPS12P20

Expression for RPS12P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS12P20 Gene

mRNA differential expression in normal tissues according to GTEx for RPS12P20 Gene

This gene is overexpressed in Whole Blood (x7.6).

NURSA nuclear receptor signaling pathways regulating expression of RPS12P20 Gene:

RPS12P20
genes like me logo Genes that share expression patterns with RPS12P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS12P20 Gene

Orthologs for RPS12P20 Gene

Evolution for RPS12P20 Gene

ENSEMBL:
Gene Tree for RPS12P20 (if available)
TreeFam:
Gene Tree for RPS12P20 (if available)

No data available for Orthologs for RPS12P20 Gene

Paralogs for RPS12P20 Gene

No data available for Paralogs for RPS12P20 Gene

Variants for RPS12P20 Gene

Relevant External Links for RPS12P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS12P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS12P20 Gene

Disorders for RPS12P20 Gene

No disorders were found for RPS12P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS12P20 Gene

Publications for RPS12P20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS12P20 Gene

Sources for RPS12P20 Gene

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