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Aliases for RPS12P16 Gene

Aliases for RPS12P16 Gene

  • Ribosomal Protein S12 Pseudogene 16 2 3 5
  • RPS12_7_1034 3

External Ids for RPS12P16 Gene

Previous GeneCards Identifiers for RPS12P16 Gene

  • GC10U901147
  • GC10M034964

Summaries for RPS12P16 Gene

GeneCards Summary for RPS12P16 Gene

RPS12P16 (Ribosomal Protein S12 Pseudogene 16) is a Pseudogene.

Additional gene information for RPS12P16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS12P16 Gene

Genomics for RPS12P16 Gene

Regulatory Elements for RPS12P16 Gene

Enhancers for RPS12P16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H034695 1.4 Ensembl ENCODE dbSUPER 0.3 -23.4 -23447 7 PKNOX1 NFIB ZFP64 SIN3A FEZF1 BATF ZNF121 ZSCAN5C RCOR1 FOS ENSG00000271335 PARD3 RPS12P16 PIR42782
GH10H034710 1.4 Ensembl ENCODE dbSUPER 0.3 -34.9 -34949 2 RAD21 RARA YY1 ZNF366 FOS USF2 CEBPB TSHZ1 REST ZNF518A PARD3 PARD3-AS1 RPS12P16 PIR42782
GH10H034718 1.1 Ensembl ENCODE dbSUPER 0.3 -44.4 -44377 3 SMARCE1 CTBP1 GATA3 ELF1 DPF2 MAFK FOXA1 PARD3 PARD3-AS1 RPS12P16 PIR42782
GH10H034713 1 Ensembl ENCODE 0.3 -38.1 -38060 1 ELF3 SOX13 FOXA2 RARA TEAD3 FOSL2 FOS NR2F6 CREM HOMEZ RPS12P16 PIR42782
GH10H034739 1.4 Ensembl ENCODE dbSUPER 0.2 -63.9 -63855 1 FOXA2 KLF17 FEZF1 ZNF2 GLIS2 ZNF366 SCRT2 EGR2 ZNF362 USF2 PARD3 PARD3-AS1 PIR42782 RPS12P16
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS12P16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS12P16 Gene

Chromosome:
10
Start:
34,675,613 bp from pter
End:
34,676,128 bp from pter
Size:
516 bases
Orientation:
Minus strand

Genomic View for RPS12P16 Gene

Genes around RPS12P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS12P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS12P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS12P16 Gene

Proteins for RPS12P16 Gene

Post-translational modifications for RPS12P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS12P16 Gene

Domains & Families for RPS12P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS12P16 Gene

Function for RPS12P16 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS12P16
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS12P16 Gene

Localization for RPS12P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS12P16 Gene

Pathways & Interactions for RPS12P16 Gene

SuperPathways for RPS12P16 Gene

No Data Available

Interacting Proteins for RPS12P16 Gene

Gene Ontology (GO) - Biological Process for RPS12P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS12P16 Gene

Drugs & Compounds for RPS12P16 Gene

No Compound Related Data Available

Transcripts for RPS12P16 Gene

mRNA/cDNA for RPS12P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS12P16
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS12P16 Gene

No ASD Table

Relevant External Links for RPS12P16 Gene

GeneLoc Exon Structure for
RPS12P16
ECgene alternative splicing isoforms for
RPS12P16

Expression for RPS12P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS12P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS12P16 Gene:

RPS12P16
genes like me logo Genes that share expression patterns with RPS12P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS12P16 Gene

Orthologs for RPS12P16 Gene

Evolution for RPS12P16 Gene

ENSEMBL:
Gene Tree for RPS12P16 (if available)
TreeFam:
Gene Tree for RPS12P16 (if available)

No data available for Orthologs for RPS12P16 Gene

Paralogs for RPS12P16 Gene

No data available for Paralogs for RPS12P16 Gene

Variants for RPS12P16 Gene

Relevant External Links for RPS12P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS12P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS12P16 Gene

Disorders for RPS12P16 Gene

Relevant External Links for RPS12P16

Genetic Association Database (GAD)
RPS12P16

No disorders were found for RPS12P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS12P16 Gene

Publications for RPS12P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease. (PMID: 18587394) Barrett JC … Daly MJ (Nature genetics 2008) 45 60

Products for RPS12P16 Gene

Sources for RPS12P16 Gene

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