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Aliases for RPS12P15 Gene

Subcategory (RNA class) for RPS12P15 Gene

lncRNA

Aliases for RPS12P15 Gene

  • Ribosomal Protein S12 Pseudogene 15 2 3
  • RPS12_7_934 3

External Ids for RPS12P15 Gene

ORGUL Members for RPS12P15 Gene

Previous GeneCards Identifiers for RPS12P15 Gene

  • GC08U901141
  • GC08P103516

Summaries for RPS12P15 Gene

GeneCards Summary for RPS12P15 Gene

RPS12P15 (Ribosomal Protein S12 Pseudogene 15) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS12P15 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS12P15 Gene

Genomics for RPS12P15 Gene

GeneHancer (GH) Regulatory Elements for RPS12P15 Gene

Promoters and enhancers for RPS12P15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I102505 Enhancer 0.4 ENCODE 550.8 +1.8 1826 0.9 TEAD1 REST RPS12P15 LOC107986898 RNU6-1224P RNU6ATAC8P LOC105375683 UBR5 ODF1
GH08I102492 Enhancer 0.8 ENCODE 0.4 -11.5 -11525 0.2 ELF3 FOXA2 ARID4B THRB RARA FOS CREM THAP11 PPARG KAT8 RPS12P15 HSPE1P14
GH08I102511 Enhancer 0.6 ENCODE 0.4 +8.2 8190 0.7 ZNF335 GATA3 FOXA2 ZBTB48 DACH1 DMAP1 ZNF644 FOXA1 TEAD3 RPS12P15 LOC107986898
GH08I102487 Enhancer 0.6 ENCODE 0.4 -15.7 -15725 0.2 NCOA3 GTF2F1 ZNF687 DPF2 MNT KLF4 ZNF592 ZKSCAN1 CTBP1 MTA1 RRM2B RPS12P15 HSPE1P14
GH08I102517 Enhancer 0.5 ENCODE 0.4 +14.0 14028 0.9 MITF USF1 BHLHE40 USF2 RNU6ATAC8P RPS12P15 LOC107986898
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS12P15 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS12P15 Gene

Genomic Locations for RPS12P15 Gene
chr8:102,503,753-102,504,138
(GRCh38/hg38)
Size:
386 bases
Orientation:
Plus strand
chr8:103,515,981-103,516,366
(GRCh37/hg19)

Genomic View for RPS12P15 Gene

Genes around RPS12P15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS12P15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS12P15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS12P15 Gene

Proteins for RPS12P15 Gene

Post-translational modifications for RPS12P15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS12P15 Gene

Domains & Families for RPS12P15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS12P15 Gene

Function for RPS12P15 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS12P15 Gene

Localization for RPS12P15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS12P15 Gene

Pathways & Interactions for RPS12P15 Gene

SuperPathways for RPS12P15 Gene

No Data Available

Interacting Proteins for RPS12P15 Gene

Gene Ontology (GO) - Biological Process for RPS12P15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS12P15 Gene

Drugs & Compounds for RPS12P15 Gene

No Compound Related Data Available

Transcripts for RPS12P15 Gene

mRNA/cDNA for RPS12P15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS12P15 Gene

No ASD Table

Relevant External Links for RPS12P15 Gene

GeneLoc Exon Structure for
RPS12P15
ECgene alternative splicing isoforms for
RPS12P15

Expression for RPS12P15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS12P15 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS12P15 Gene:

RPS12P15
genes like me logo Genes that share expression patterns with RPS12P15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS12P15 Gene

Orthologs for RPS12P15 Gene

Evolution for RPS12P15 Gene

ENSEMBL:
Gene Tree for RPS12P15 (if available)
TreeFam:
Gene Tree for RPS12P15 (if available)

No data available for Orthologs for RPS12P15 Gene

Paralogs for RPS12P15 Gene

No data available for Paralogs for RPS12P15 Gene

Variants for RPS12P15 Gene

Additional Variant Information for RPS12P15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS12P15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS12P15 Gene

Disorders for RPS12P15 Gene

No disorders were found for RPS12P15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS12P15 Gene

Publications for RPS12P15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS12P15 Gene

Sources for RPS12P15 Gene

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