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Aliases for RPS12P10 Gene

Subcategory (RNA class) for RPS12P10 Gene

lncRNA

Aliases for RPS12P10 Gene

  • Ribosomal Protein S12 Pseudogene 10 2 3 5
  • RPS12_4_622 3

External Ids for RPS12P10 Gene

ORGUL Members for RPS12P10 Gene

Previous GeneCards Identifiers for RPS12P10 Gene

  • GC05U901074
  • GC05P141947

Summaries for RPS12P10 Gene

GeneCards Summary for RPS12P10 Gene

RPS12P10 (Ribosomal Protein S12 Pseudogene 10) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS12P10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS12P10 Gene

Genomics for RPS12P10 Gene

GeneHancer (GH) Regulatory Elements for RPS12P10 Gene

Promoters and enhancers for RPS12P10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I142567 Enhancer 0.8 FANTOM5 Ensembl ENCODE 550.8 +1.9 1918 2.4 CEBPB FOS RPS12P10 GC05M142626 SPRY4-AS1
GH05I142550 Enhancer 1.3 VISTA Ensembl ENCODE 0.4 -15.3 -15275 2.6 SIN3A ZIC2 ETS1 ZNF335 GLIS2 ZBTB48 PATZ1 TCF7L2 ZBTB20 MAZ GC05M142544 RPS12P10 SPRY4-AS1
GH05I142548 Enhancer 1.1 Ensembl ENCODE 0.4 -17.7 -17714 1.1 ELF3 ARID4B SIN3A ZNF2 ZNF48 ZSCAN9 RAD21 ETS1 ZNF335 ARID2 LOC729080 GC05M142544 RPS12P10 SPRY4-AS1
GH05I142600 Enhancer 0.9 Ensembl ENCODE 0.3 +34.2 34160 1.7 CTCF FOXA2 ZNF449 MAX RAD21 YY1 FOSL1 ZNF335 RXRA REST GC05M142626 RPS12P10 FGF1 SPRY4-AS1
GH05I142597 Enhancer 0.9 Ensembl ENCODE 0.3 +31.5 31546 1.4 CTCF JUN BACH1 FOSL1 ZNF316 RBAK FOSL2 FOS ZNF600 NFE2 KIAA0141 GNPDA1 GC05M142626 RPS12P10 FGF1 SPRY4-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS12P10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS12P10 Gene

Genomic Locations for RPS12P10 Gene
chr5:142,566,700-142,567,082
(GRCh38/hg38)
Size:
383 bases
Orientation:
Plus strand
chr5:141,946,265-141,946,647
(GRCh37/hg19)

Genomic View for RPS12P10 Gene

Genes around RPS12P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS12P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS12P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS12P10 Gene

Proteins for RPS12P10 Gene

Post-translational modifications for RPS12P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS12P10 Gene

Domains & Families for RPS12P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS12P10 Gene

Function for RPS12P10 Gene

Phenotypes From GWAS Catalog for RPS12P10 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS12P10 Gene

Localization for RPS12P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS12P10 Gene

Pathways & Interactions for RPS12P10 Gene

SuperPathways for RPS12P10 Gene

No Data Available

Interacting Proteins for RPS12P10 Gene

Gene Ontology (GO) - Biological Process for RPS12P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS12P10 Gene

Drugs & Compounds for RPS12P10 Gene

No Compound Related Data Available

Transcripts for RPS12P10 Gene

mRNA/cDNA for RPS12P10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS12P10 Gene

No ASD Table

Relevant External Links for RPS12P10 Gene

GeneLoc Exon Structure for
RPS12P10
ECgene alternative splicing isoforms for
RPS12P10

Expression for RPS12P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS12P10 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS12P10 Gene:

RPS12P10
genes like me logo Genes that share expression patterns with RPS12P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS12P10 Gene

Orthologs for RPS12P10 Gene

Evolution for RPS12P10 Gene

ENSEMBL:
Gene Tree for RPS12P10 (if available)
TreeFam:
Gene Tree for RPS12P10 (if available)

No data available for Orthologs for RPS12P10 Gene

Paralogs for RPS12P10 Gene

No data available for Paralogs for RPS12P10 Gene

Variants for RPS12P10 Gene

Additional Variant Information for RPS12P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS12P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS12P10 Gene

Disorders for RPS12P10 Gene

Additional Disease Information for RPS12P10

Genetic Association Database
(GAD)

No disorders were found for RPS12P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS12P10 Gene

Publications for RPS12P10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS12P10 Gene

Sources for RPS12P10 Gene

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