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Aliases for RPS11P6 Gene

Aliases for RPS11P6 Gene

  • Ribosomal Protein S11 Pseudogene 6 2 3 5
  • RPS11_2_1249 3

External Ids for RPS11P6 Gene

Previous GeneCards Identifiers for RPS11P6 Gene

  • GC12P063077
  • GC12P064747
  • GC12P064617

Summaries for RPS11P6 Gene

GeneCards Summary for RPS11P6 Gene

RPS11P6 (Ribosomal Protein S11 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS11P6 Gene

Genomics for RPS11P6 Gene

Regulatory Elements for RPS11P6 Gene

Enhancers for RPS11P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F064252 0.8 Ensembl ENCODE 11.5 +30.6 30574 1.0 ZNF133 CEBPB RPS11P6 RNU6-1009P XPOT ENSG00000255629 C12orf56 ENSG00000256192 C12orf66
GH12F064186 1.1 Ensembl ENCODE 11.2 -34.6 -34637 2.2 SMARCC1 PKNOX1 JUN JUNB EP300 ZKSCAN1 JUND PBX2 EED KDM1A RPS11P6 C12orf66 ENSG00000255629 GC12P064205
GH12F064256 0.2 ENCODE 10.9 +34.0 33999 0.2 CTCF ZNF362 ZNF654 ZNF501 REST RAD21 SMC3 CUX1 RPS11P6 RNU6-1009P ENSG00000255629 ENSG00000256192 C12orf66
GH12F064450 1.1 ENCODE 10.9 +230.0 230031 3.6 PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF143 ZNF207 FOS SP3 TBK1 XPOT RPS11P6 ENSG00000277895
GH12F064180 1.5 FANTOM5 Ensembl ENCODE 10.8 -40.7 -40716 3.2 ZSCAN5A CTCF PKNOX1 SAP130 JUN SIN3A RAD21 SMARCC2 SMC3 FOS LEMD3 RNU6-1009P RPS11P6 C12orf66 GC12P064205 ENSG00000255629
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS11P6 on UCSC Golden Path with GeneCards custom track

Promoters for RPS11P6 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000173375 -137 1601 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9

Genomic Location for RPS11P6 Gene

Chromosome:
12
Start:
64,222,337 bp from pter
End:
64,397,065 bp from pter
Size:
174,729 bases
Orientation:
Plus strand

Genomic View for RPS11P6 Gene

Genes around RPS11P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS11P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS11P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS11P6 Gene

Proteins for RPS11P6 Gene

Post-translational modifications for RPS11P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS11P6 Gene

Domains & Families for RPS11P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS11P6 Gene

Function for RPS11P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS11P6 Gene

Localization for RPS11P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS11P6 Gene

Pathways & Interactions for RPS11P6 Gene

SuperPathways for RPS11P6 Gene

No Data Available

Interacting Proteins for RPS11P6 Gene

Gene Ontology (GO) - Biological Process for RPS11P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS11P6 Gene

Transcripts for RPS11P6 Gene

mRNA/cDNA for RPS11P6 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS11P6 Gene

No ASD Table

Relevant External Links for RPS11P6 Gene

GeneLoc Exon Structure for
RPS11P6
ECgene alternative splicing isoforms for
RPS11P6

Expression for RPS11P6 Gene

mRNA expression in normal human tissues for RPS11P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPS11P6 Gene

This gene is overexpressed in Testis (x17.9).

NURSA nuclear receptor signaling pathways regulating expression of RPS11P6 Gene:

RPS11P6
genes like me logo Genes that share expression patterns with RPS11P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS11P6 Gene

Orthologs for RPS11P6 Gene

Evolution for RPS11P6 Gene

ENSEMBL:
Gene Tree for RPS11P6 (if available)
TreeFam:
Gene Tree for RPS11P6 (if available)

No data available for Orthologs for RPS11P6 Gene

Paralogs for RPS11P6 Gene

No data available for Paralogs for RPS11P6 Gene

Variants for RPS11P6 Gene

Relevant External Links for RPS11P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS11P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS11P6 Gene

Disorders for RPS11P6 Gene

Relevant External Links for RPS11P6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPS11P6

No disorders were found for RPS11P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS11P6 Gene

Publications for RPS11P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS11P6 Gene

Sources for RPS11P6 Gene

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