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RPS11P2 Gene(Pseudogene)

Ribosomal Protein S11 Pseudogene 2

GCID:
GC01M240636
GIFtS:
9
Genes Participants
UDN Logo

Aliases for RPS11P2 Gene

Aliases for RPS11P2 Gene

  • Ribosomal Protein S11 Pseudogene 2 2 3
  • RPS11_1_184 3
  • AL358176.3 5

External Ids for RPS11P2 Gene

Previous GeneCards Identifiers for RPS11P2 Gene

  • GC01M238869
  • GC01M240800

Summaries for RPS11P2 Gene

GeneCards Summary for RPS11P2 Gene

RPS11P2 (Ribosomal Protein S11 Pseudogene 2) is a Pseudogene.

Additional gene information for RPS11P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS11P2 Gene

Genomics for RPS11P2 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPS11P2 Gene

Promoters and enhancers for RPS11P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01I240652 Enhancer 0.8 ENCODE 0.4 -15.7 -15717 0.8 KLF1 PKNOX1 FOXA2 ZNF529 MZF1 ZNF384 FEZF1 ZBTB40 ZFHX2 GATA3 LOC100128958 RNU5F-8P RPS11P2
GH01I240649 Enhancer 0.7 ENCODE 0.4 -13.5 -13476 2.6 MAX CEBPG RAD21 RFX5 YY1 HNF4G ZNF350 ZNF600 MAFK TCF7L2 RNU5F-8P RPS11P2
GH01I240643 Enhancer 0.4 ENCODE 0.4 -7.6 -7629 1.7 MITF SOX6 USF2 RNU5F-8P RPS11P2
GH01I240646 Enhancer 0.2 ENCODE 0.4 -9.7 -9696 0.7 RNU5F-8P RPS11P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS11P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS11P2 Gene

Genomic Locations for RPS11P2 Gene
chr1:240,636,534-240,637,073
(GRCh38/hg38)
Size:
540 bases
Orientation:
Minus strand
chr1:240,799,839-240,800,373
(GRCh37/hg19)

Genomic View for RPS11P2 Gene

Genes around RPS11P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS11P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS11P2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS11P2 Gene

Proteins for RPS11P2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS11P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS11P2 Gene

Domains & Families for RPS11P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS11P2 Gene

Function for RPS11P2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS11P2 Gene

Localization for RPS11P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS11P2 Gene

Pathways & Interactions for RPS11P2 Gene

SuperPathways for RPS11P2 Gene

PathCards logo More details on SuperPathways for RPS11P2
No Data Available

Interacting Proteins for RPS11P2 Gene

Gene Ontology (GO) - Biological Process for RPS11P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS11P2 Gene

Drugs & Compounds for RPS11P2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS11P2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS11P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS11P2 Gene

No ASD Table

Relevant External Links for RPS11P2 Gene

GeneLoc Exon Structure for
RPS11P2
ECgene alternative splicing isoforms for
RPS11P2

Expression for RPS11P2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS11P2 Gene

mRNA expression in normal human tissues for RPS11P2 Gene
mRNA expression by GTEx for RPS11P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS11P2 Gene:

RPS11P2
genes like me logo Genes that share expression patterns with RPS11P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS11P2 Gene

Orthologs for RPS11P2 Gene

Evolution for RPS11P2 Gene

ENSEMBL:
Gene Tree for RPS11P2 (if available)
TreeFam:
Gene Tree for RPS11P2 (if available)

No data available for Orthologs for RPS11P2 Gene

Paralogs for RPS11P2 Gene

No data available for Paralogs for RPS11P2 Gene

Variants for RPS11P2 Gene

Additional Variant Information for RPS11P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS11P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS11P2 Gene

Disorders for RPS11P2 Gene

Additional Disease Information for RPS11P2

Genetic Association Database
(GAD)

No disorders were found for RPS11P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS11P2 Gene

Publications for RPS11P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Association between chromosome 9p21 variants and the ankle-brachial index identified by a meta-analysis of 21 genome-wide association studies. (PMID: 22199011) Murabito JM … Kronenberg F (Circulation. Cardiovascular genetics 2012) 44 58

Products for RPS11P2 Gene

Sources for RPS11P2 Gene

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