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RPS11P2 Gene(Pseudogene)

Ribosomal Protein S11 Pseudogene 2

GCID:
GC01M240636
GIFtS:
12
Genes Participants
UDN Logo

Aliases for RPS11P2 Gene

Aliases for RPS11P2 Gene

  • Ribosomal Protein S11 Pseudogene 2 2 3
  • RP11-467I20.3 5
  • RPS11_1_184 3

External Ids for RPS11P2 Gene

Previous GeneCards Identifiers for RPS11P2 Gene

  • GC01M238869
  • GC01M240800

Summaries for RPS11P2 Gene

GeneCards Summary for RPS11P2 Gene

RPS11P2 (Ribosomal Protein S11 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS11P2 Gene

Genomics for RPS11P2 Gene

Products:

  1. Regulatory Element

Regulatory Elements for RPS11P2 Gene

Enhancers for RPS11P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G240652 0.8 ENCODE 0.4 -15.7 -15718 0.8 PKNOX1 KLF1 FOXA2 FEZF1 ZNF384 ZBTB40 ZFHX2 GATA3 ZNF366 ZSCAN5C RNU5F-8P RPS11P2
GH01G240649 0.8 ENCODE 0.4 -13.5 -13477 2.6 MAX CEBPG RAD21 RFX5 YY1 ZNF350 HNF4G ZNF600 MAFK TCF7L2 RNU5F-8P RPS11P2
GH01G240643 0.4 ENCODE 0.4 -7.6 -7629 1.7 USF2 TRIM28 RPS11P2 RNU5F-8P
GH01G240646 0.2 ENCODE 0.4 -9.7 -9697 0.7 RNU5F-8P RPS11P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS11P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS11P2 Gene

Chromosome:
1
Start:
240,636,534 bp from pter
End:
240,637,073 bp from pter
Size:
540 bases
Orientation:
Minus strand

Genomic View for RPS11P2 Gene

Genes around RPS11P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS11P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS11P2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS11P2 Gene

Proteins for RPS11P2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS11P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS11P2 Gene

Domains & Families for RPS11P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS11P2 Gene

Function for RPS11P2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS11P2 Gene

Localization for RPS11P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS11P2 Gene

Pathways & Interactions for RPS11P2 Gene

SuperPathways for RPS11P2 Gene

PathCards logo More details on SuperPathways for RPS11P2
No Data Available

Interacting Proteins for RPS11P2 Gene

Gene Ontology (GO) - Biological Process for RPS11P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS11P2 Gene

Drugs & Compounds for RPS11P2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS11P2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for RPS11P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS11P2 Gene

No ASD Table

Relevant External Links for RPS11P2 Gene

GeneLoc Exon Structure for
RPS11P2
ECgene alternative splicing isoforms for
RPS11P2

Expression for RPS11P2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS11P2 Gene

mRNA expression in normal human tissues for RPS11P2 Gene
mRNA expression by GTEx for RPS11P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS11P2 Gene:

RPS11P2
genes like me logo Genes that share expression patterns with RPS11P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS11P2 Gene

Orthologs for RPS11P2 Gene

Evolution for RPS11P2 Gene

ENSEMBL:
Gene Tree for RPS11P2 (if available)
TreeFam:
Gene Tree for RPS11P2 (if available)

No data available for Orthologs for RPS11P2 Gene

Paralogs for RPS11P2 Gene

No data available for Paralogs for RPS11P2 Gene

Variants for RPS11P2 Gene

Relevant External Links for RPS11P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS11P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS11P2 Gene

Disorders for RPS11P2 Gene

Relevant External Links for RPS11P2

Genetic Association Database (GAD)
RPS11P2

No disorders were found for RPS11P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS11P2 Gene

Publications for RPS11P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Association between chromosome 9p21 variants and the ankle-brachial index identified by a meta-analysis of 21 genome-wide association studies. (PMID: 22199011) Murabito J.M. … Kronenberg F. (Circ Cardiovasc Genet 2012) 46 64

Products for RPS11P2 Gene

Sources for RPS11P2 Gene

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