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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

RPS11 Gene

protein-coding   GIFtS: 59
GCID: GC19P049999

ribosomal protein S11
 Explore 4 diseases affiliated with
RPS11 via
MalaCards
our new
 Human Malady Compendium 
Biological research products
for RPS11    

Aliases
for RPS11 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section
Aliases
Ribosomal Protein S111 2
S111 2
40S Ribosomal Protein S112

External Ids:    HGNC: 103841   Entrez Gene: 62052   Ensembl: ENSG000001425347   OMIM: 1804715   UniProtKB: P622803   

Export aliases for RPS11 gene to outside databases

Previous GC identifers: GC19P050657 GC19P050367 GC19P054675 GC19P054692 GC19P054693 GC19P054695 GC19P054710 GC19P054719 GC19P054720 GC19P054728 GC19P054735 GC19P054742 GC19P054749 GC19P054755 GC19P054767 GC19P054779 GC19P046377


Summaries
for RPS11 gene

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section
Entrez Gene summary for RPS11:
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit.
Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene
encodes a member of the S17P family of ribosomal proteins that is a component of the 40S subunit. This gene is
co-transcribed with the small nucleolar RNA gene U35B, which is located in the third intron. As is typical for genes
encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed throughout the genome.
(provided by RefSeq, Jul 2012)

Gene Wiki entry for RPS11


Genomic Views
for RPS11 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000019.9  NC_018930.1  NT_011109.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the RPS11 gene promoter:
         TBP   NF-1   NF-1/L   AP-4   Tal-1beta   FOXL1   E47   GATA-1   STAT3   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): RPS11 promoter sequence
   Search SABiosciences Chromatin IP Primers for RPS11

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RPS11


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19q13.3   Ensembl cytogenetic band:  19q13.33   HGNC cytogenetic band: 19q13.3

RPS11 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RPS11 gene location

GeneLoc information about chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19P049999:  view genomic region     (about GC identifiers)

Start:
 49,999,634 bp from pter      End:
 50,002,944 bp from pter
Size:
 3,311 bases      Orientation:
 plus strand

Proteins
for RPS11 gene

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section
UniProtKB/Swiss-Prot: RS11_HUMAN, P62280 (See protein sequence)
Recommended Name: 40S ribosomal protein S11  
Size: 158 amino acids; 18431 Da
Secondary accessions: B2R4F5 P04643 Q498Y6 Q6IRY0

Explore the universe of human proteins at neXtProt for RPS11: NX_P62280

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P62280

    • RPS11 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_001006.1  
    ENSEMBL proteins: 
     ENSP00000270625  
    Reactome Protein details: P62280
    Human Recombinant Protein Products: 
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    OriGene Protein Over-expression Lysate: RPS11
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    Novus Biologicals RPS11 Proteins
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for RPS11

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829cytosol TAS--
    GO:0005840ribosome NAS3267208
    GO:0022627cytosolic small ribosomal subunit IDA8706699


    RPS11 for ontologies           About GeneDecksing



    RPS11 Antibody Products: 
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    Uscn ELISAs and CLIAs for RPS11

    Protein Domains /
    Families
    for RPS11 gene

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    RPS11 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR012340 NA-bd_OB-fold
     IPR019978 Ribosomal_S17_archaeal
     IPR000266 Ribosomal_S17
     IPR019979 Ribosomal_S17_CS

    Graphical View of Domain Structure for InterPro Entry P62280

    ProtoNet protein and cluster: P62280

    UniProtKB/Swiss-Prot: RS11_HUMAN, P62280
    Similarity: Belongs to the ribosomal protein S17P family


    Function
    for RPS11 gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section
    Function Summary:
         Genatlas biochemistry entry for RPS11:
    40S ribosomal protein S11,18kDa

    miRNA
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    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:            		Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RPS11 (see all 7)
    OriGene shRNA RFP: RPS11
    OriGene siRNA: RPS11
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RPS11

    Gene Editing
    Products:    		DNA2.0 Custom Protein Engineering Service for RPS11

    Clone
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    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RPS11 (see all 4)
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    Browse Sino Biological Human cDNA Clones
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RPS11 

    Cell Line
    Products:             		GenScript Custom overexpressing Cell Line Services for RPS11
    Search LifeMap BioReagents cell lines for RPS11

    In Situ Assay
    Products:       
         		Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for RPS11

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003735structural constituent of ribosome IEA--
    GO:0019843rRNA binding IEA--


    RPS11 for ontologies           About GeneDecksing


    6 GenomeRNAi human phenotypes for RPS11:
     Decreased Hepatitis C virus re  Decreased cell number, increas  Decreased viability  Decreased viability of wild-ty 
     Nucleolar pre-40S maturation d  S arrest 


    Pathways & Interactions
    for RPS11 gene

    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/7 super-pathways (see all 7) About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Synthesis of PB1-F2
    8/26 pathways (see all 26)
    		Viral Protein Synthesis1.00
    		Cytoplasmic Ribosomal Proteins0.86
    		Viral mRNA Translation1.00
    		CFTR translational fidelity (class I mutations)0.83
    		Influenza Viral RNA Transcription and Replication1.00
    		SMG6 Cleaves mRNA with Premature Termination Codon0.80
    		Synthesis of nascent polypeptide containing signal sequence1.00
    		L13a-mediated translational silencing of Ceruloplasmin expression0.79
    2Translation initiation complex formation
    		Translation initiation complex formation1.00
    		Ribosomal scanning and start codon recognition0.96
    		Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S0.98
    		Formation of the ternary complex, and subsequently, the 43S complex0.87
    3Metabolism of mRNA
    		Metabolism of mRNA1.00
    		Metabolism of RNA0.92
    4Disease
    		Disease1.00
    5TNF-alpha/NF-kB Signaling Pathway
    		TNF-alpha/NF-kB Signaling Pathway1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 GeneGo (Thomson Reuters) Pathway for RPS11
        CFTR translational fidelity (class I mutations)

    2 BioSystems Pathways for RPS11 
        TNF-alpha/NF-kB Signaling Pathway
    Cytoplasmic Ribosomal Proteins

    5/32        Reactome Pathways for RPS11 (see all 32)
        Formation of a pool of free 40S subunits
    Synthesis of PB1-F2
    SMG6 Cleaves mRNA with Premature Termination Codon
    Influenza Life Cycle
    Viral mRNA Translation


    1         Kegg Pathway  (Kegg details for RPS11):
        Ribosome


    RPS11 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for RPS11

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/321 Interacting proteins for RPS11 (P622801, 2, 3 ENSP000002706254) via UniProtKB, MINT, STRING, and/or I2D (see all 321)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H4AP628053I2D: score=2 
    HIST1H4BP628053I2D: score=2 
    HIST1H4CP628053I2D: score=2 
    HIST1H4DP628053I2D: score=2 
    HIST1H4EP628053I2D: score=2 
    About this table

    Gene Ontology (GO): 5/13 biological process terms (GO ID links to tree view) (see all 13):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS--
    GO:0006412translation TAS--
    GO:0006413translational initiation TAS--
    GO:0006414translational elongation TAS--
    GO:0006415translational termination TAS--


    RPS11 for ontologies           About GeneDecksing



    Drugs & Compounds
    for RPS11 gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for RPS11
    Search CenterWatch for drugs/clinical trials and news about RPS11 / RS11 

    Transcripts
    for RPS11 gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section
    REFSEQ mRNAs for RPS11 gene: 
    NM_001015.4  

    Unigene Cluster for RPS11:

    Ribosomal protein S11
    Hs.433529  [show with all ESTs]
    Unigene Representative Sequence: BQ057286
    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000270625(uc002pob.1)

    miRNA
    Products:             		 OriGene 3'-UTR Clone: RPS11
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    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:             		Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RPS11 (see all 7)
    OriGene shRNA RFP: RPS11
    OriGene siRNA: RPS11
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RPS11
    Clone
    Products:             		 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RPS11 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RPS11
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: RPS11 (NM_001015)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for RPS11
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RPS11 
    Primer
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    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat RPS11
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RPS11
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RPS11

    Additional cDNA sequence: 

    AK311809.1 BC007283.1 BC007603.1 BC007945.2 BC010028.2 BC016378.1 BC018829.2 BC070224.1 
    BC100025.1 X06617.1 

    24/77 DOTS entries (see all 77):

    DT.98083115  DT.100768287  DT.455617  DT.91774341  DT.91774321  DT.95377225  DT.100709540  DT.100709544 
    DT.100709541  DT.100709551  DT.91774344  DT.100709539  DT.100868225  DT.100709526  DT.100709532  DT.95376621 
    DT.98083113  DT.100639354  DT.100693848  DT.100709528  DT.100709546  DT.121409773  DT.95081926  DT.95376924 

    17 AceView cDNA sequences:

    BC007603 BC018829 CR591220 CR616168 CR619273 BC007945 NM_001015 BC010187 
    BC010028 CR598342 BC007283 BC016378 CR603659 CR622474 X06617 BC070224 
    AK130324 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for RPS11    About this scheme

    ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b · 4c ^ 5
    SP1:                    -           -           -                     
    SP2:                                -           -                     
    SP3:                    -                                             
    SP4:                    -                       -                     
    SP5:                                                                  


    ECgene alternative splicing isoforms for RPS11

    Expression
    for RPS11 gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    RPS11 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TCTGTACACC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)
    About this image

    RPS11 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Endoderm-like cells (Generation of hepato...)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See RPS11 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for RPS11

    SOURCE GeneReport for Unigene cluster: Hs.433529
        SABiosciences Custom PCR Arrays for RPS11
    Primer
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    In Situ
    Assay Products:     
         		Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for RPS11

    Orthologs
    for RPS11 gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section
    This gene was present in the common ancestor of eukaryotes.

    Orthologs for RPS11 gene from 10/41 species (see all 41)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    mouse
    (Mus musculus)    		 Mammalia Rps111 , 5 ribosomal protein S111, 5 90.08(n)1
    100(a)1    		   7 (29.14 cM)5
    272071  NM_013725.41  NP_038753.11 
     451223885 
    chicken
    (Gallus gallus)    		 Aves RPS111 ribosomal protein S11 86.71(n)
    98.1(a)    		   419049  NM_001030833.1  NP_001026004.1 
    lizard
    (Anolis carolinensis)    		 Reptilia RPS116
    		 --
    		 99(a)
    		 1 ↔ 1
    		 GL343693.1(227825-234276)
    African clawed frog
    (Xenopus laevis)    		 Amphibia rps11-prov2 ribosomal protein S11 83.44(n)    BC053813.1 
    zebrafish
    (Danio rerio)    		 Actinopterygii Dr.13392 Danio rerio similar to 40S ribosomal protein S11, mRNA more 82.34(n)    BC046054.1 
    fruit fly
    (Drosophila melanogaster)    		 Insecta CG88573
    RpS111    		 protein biosynthesis structural constituent
    of more3
    Ribosomal protein S111    		 71(a)3
    69.68(n)1
    72.9(a)1    		   363211  NM_165868.11  NP_725114.11 
    worm
    (Caenorhabditis elegans)    		 Secernentea rps-111 , 3 ribosomal protein S113
    Protein RPS-111    		 68(a)3
    66(n)1
    68.21(a)1    		   IV(11602779-11603715)3
    1780831  NM_069785.41  NP_502186.11 
    baker's yeast
    (Saccharomyces cerevisiae)    		 Saccharomycetes RPS11A(YDR025W)4
    RPS11A1    		 Protein component of the small (40S) ribosomal subunit; more4
    Rps11ap1    		 66.44(n)1
    73.15(a)1    		   4(491515-492324)4
    8515891, 4  NP_010308.31  NP_010308.14 
    thale cress
    (Arabidopsis thaliana)    		 eudicotyledons AT4G308001 40S ribosomal protein S11-2 63.22(n)
    68.97(a)    		   829203  NM_119226.3  NP_194809.1 
    rice
    (Oryza sativa)    		 Liliopsida Os.94052 Oryza sativa (japonica cultivar-group) cDNA cloneJ more 77.91(n)    AK120520.1 


    ENSEMBL Gene Tree for RPS11 (if available)
    TreeFam Gene Tree for RPS11 (if available) 

    Paralogs
    for RPS11 gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for RPS11 gene

    RPS11 for paralogs           About GeneDecksing


    5/9 Pseudogenes.org Pseudogenes for RPS11 (see all 9)
    PGOHUM00000239833 PGOHUM00000251029 PGOHUM00000248913 PGOHUM00000244019 PGOHUM00000244504


    Genomic Variants
    for RPS11 gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/158 NCBI SNPs in RPS11 are shown (see all 158)     About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 19 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    rs1833369401,2
    		--49997704(+) GGCTGC/GGGAGG 1 -- us2k10--------
    rs1865905701,2
    		--49997916(+) AAATAC/GAAAAA 1 -- us2k10--------
    rs104212941,2
    		C,--49997982(+) GGCAGA/GAGAAT 1 -- us2k12Minor allele frequency- G:0.33NA CSA 3
    rs1509512721,2
    		C,F,--49998020(+) AGTGAA/GCCGAG 1 -- us2k11Minor allele frequency- G:0.02NS 150
    rs1478050681,2
    		--49998163(+) TAGATA/CTAACA 1 -- us2k10--------
    rs1904589621,2
    		--49998214(+) ACATTC/TAGAGT 1 -- us2k10--------
    rs72582941,2
    		C,F,A,H,--49998299(+) TATCTT/ACAGAA 1 -- us2k117Minor allele frequency- A:0.11NS EA NA CSA WA 1742
    rs1130104331,2
    		--49998327(+) CTCCAC/TGCCAA 1 -- us2k12Minor allele frequency- T:0.15CSA WA 120
    rs1411217791,2
    		--49998328(+) TCCACA/GCCAAC 1 -- us2k10--------
    rs2002478131,2
    		--49998383(+) AGTAG-/CTTT  
                CTTTC     		1 -- us2k10--------

    HapMap Linkage Disequilibrium report for RPS11 (49999634 - 50002944 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 3 variations for RPS11
         3 CNVs: 5111 5110 32261

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    Disorders / Diseases
    for RPS11 gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    RPS11 for disorders           About GeneDecksing

    OMIM gene information: 180471    OMIM disorders: --

    4 diseases for RPS11:    About MalaCards
    fanconi's anemia    anemia    osteosarcoma    malaria


    Export disorders for RPS11 gene to outside databases

    Publications
    for RPS11 gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for RPS11 gene, integrated from 9 sources (see all 52):
    (articles sorted by number of sources associating them with RPS11)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. A map of 75 human ribosomal protein genes. (PubMed id 9582194)1, 2, 3 Kenmochi N.... Page D.C. (1998)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    3. Gene organization and sequence of the region containing the ribosomal protein genes RPL13A and RPS11 in the human genome and conserved features in the mouse genome. (PubMed id 10580157)1, 2 Higa S.... Kenmochi N. (1999)
    4. Characterization of the human small-ribosomal-subunit proteins by N- terminal and internal sequencing, and mass spectrometry. (PubMed id 8706699)1, 2 Vladimirov S.N.... Otto A. (1996)
    5. The mapping of seven intron-containing ribosomal protein genes shows they are unlinked in the human genome. (PubMed id 1577483)1, 3 Feo S....Fried M. (1992)
    6. Sequence of a cloned cDNA encoding human ribosomal protein S11. (PubMed id 3267208)1, 2 Lott J.B. and Mackie G.A. (1988)
    7. A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (2012)
    8. A cohesin-RAD21 interactome. (PubMed id 22145905)1 Panigrahi A.K....Pati D. (2012)
    9. Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
    10. A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883)1 Kristensen A.R....Foster L.J. (2012)

    External Searches for RPS11 gene

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
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    Genome Databases showing RPS11 gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 6205 HGNC: 10384 AceView: RPS11 Ensembl:ENSG00000142534 euGenes: HUgn6205
    ECgene: RPS11 Kegg: 6205 H-InvDB: RPS11

    Other Databases showing RPS11 gene

    (According to HUGE)
    About This Section
    		   --

    Specialized Databases showing RPS11 gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for RPS11 Pharmacogenomics, SNPs, Pathways

    Intellectual Property
    for RPS11 gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    		Patent Information for RPS11 gene:
    Search GeneIP for patents involving RPS11

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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