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Aliases for RPS10P7 Gene

Aliases for RPS10P7 Gene

  • Ribosomal Protein S10 Pseudogene 7 2 3
  • RPS10_2_147 3

External Ids for RPS10P7 Gene

Previous GeneCards Identifiers for RPS10P7 Gene

  • GC01P199756
  • GC01P201487
  • GC01P172655

Summaries for RPS10P7 Gene

GeneCards Summary for RPS10P7 Gene

RPS10P7 (Ribosomal Protein S10 Pseudogene 7) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS10P7 Gene

Genomics for RPS10P7 Gene

Regulatory Elements for RPS10P7 Gene

Enhancers for RPS10P7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F201498 1.1 FANTOM5 ENCODE 18.5 -16.8 -16764 10.2 PKNOX1 CREB3L1 ZFP64 SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 FOS IPO9 IPO9-AS1 LOC102723465 RPS10P7 ENSG00000235121 NAV1 ENSG00000236390 RNU6-704P RNPEP ENSG00000273478
GH01F201508 0.8 ENCODE 18.1 -10.8 -10796 1.3 NR2F1 CEBPG FOS RPS10P7 CSRP1 ENSG00000224536
GH01F201511 1.3 Ensembl ENCODE 17.8 -7.5 -7465 2.5 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A FEZF1 YBX1 ZNF2 YY1 RPS10P7 RNPEP ENSG00000273478 DDX59 PHLDA3 ENSG00000224818 RPS27P8 ENSG00000236390 NAV1 CSRP1
GH01F201517 1 Ensembl ENCODE 5.7 -2.0 -2029 1.7 HDAC1 PKNOX1 ZNF366 RCOR1 CEBPB ZHX2 GATAD2B ZNF592 ZNF217 MBD2 NAV1 PHLDA3 ENSG00000224818 ENSG00000235121 RNU6-501P ENSG00000236390 RPS10P7 CSRP1
GH01F201488 1.1 FANTOM5 Ensembl ENCODE 5.7 -26.8 -26795 9.1 HDGF PKNOX1 ARID4B SIN3A FEZF1 YY1 ZNF207 ZNF143 FOS DEK ENSG00000224818 NAV1 PHLDA3 LAD1 RPS10P7 LMOD1 CSRP1 GC01M201488 GC01P201494
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS10P7 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS10P7 Gene

Chromosome:
1
Start:
201,519,904 bp from pter
End:
201,520,602 bp from pter
Size:
699 bases
Orientation:
Plus strand

Genomic View for RPS10P7 Gene

Genes around RPS10P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS10P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS10P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS10P7 Gene

Proteins for RPS10P7 Gene

Post-translational modifications for RPS10P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS10P7 Gene

Domains & Families for RPS10P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS10P7 Gene

Function for RPS10P7 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS10P7 Gene

Localization for RPS10P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS10P7 Gene

Pathways & Interactions for RPS10P7 Gene

SuperPathways for RPS10P7 Gene

No Data Available

Interacting Proteins for RPS10P7 Gene

Gene Ontology (GO) - Biological Process for RPS10P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS10P7 Gene

Transcripts for RPS10P7 Gene

mRNA/cDNA for RPS10P7 Gene

(3) Additional mRNA sequences :

Unigene Clusters for RPS10P7 Gene

Ribosomal protein S10 pseudogene 7:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPS10P7 Gene

No ASD Table

Relevant External Links for RPS10P7 Gene

GeneLoc Exon Structure for
RPS10P7
ECgene alternative splicing isoforms for
RPS10P7

Expression for RPS10P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS10P7 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS10P7 Gene:

RPS10P7

SOURCE GeneReport for Unigene cluster for RPS10P7 Gene:

Hs.605989
genes like me logo Genes that share expression patterns with RPS10P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS10P7 Gene

Orthologs for RPS10P7 Gene

No data available for Orthologs and Evolution for RPS10P7 Gene

Paralogs for RPS10P7 Gene

No data available for Paralogs for RPS10P7 Gene

Variants for RPS10P7 Gene

Sequence variations from dbSNP and Humsavar for RPS10P7 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs112894892 -- 201,520,015(+) AGAAC(A/G)TGCCT nc-transcript-variant
rs113208264 -- 201,520,729(+) ACCAT(A/G)TTAGC downstream-variant-500B
rs113394509 -- 201,518,846(+) AATCT(C/T)GGCTC upstream-variant-2KB
rs113615658 -- 201,518,539(+) ACCGC(A/G/T)CCTGG upstream-variant-2KB
rs114058832 -- 201,519,454(+) AAGAA(C/G)GATAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RPS10P7 Gene

Variant ID Type Subtype PubMed ID
nsv467961 CNV gain 19166990
nsv470776 CNV gain 18288195
nsv548997 CNV gain 21841781
nsv832315 CNV loss 17160897
nsv946575 CNV duplication 23825009
nsv947466 CNV duplication 23825009

Relevant External Links for RPS10P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS10P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPS10P7 Gene

Disorders for RPS10P7 Gene

Relevant External Links for RPS10P7

Genetic Association Database (GAD)
RPS10P7
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPS10P7

No disorders were found for RPS10P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS10P7 Gene

Publications for RPS10P7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi D.J. … Shiio Y. (J. Proteome Res. 2014) 3 64
  3. Genome-wide association identifies the ABO blood group as a major locus associated with serum levels of soluble E-selectin. (PMID: 19729612) Paterson A.D. … Bull S.B. (Arterioscler. Thromb. Vasc. Biol. 2009) 46 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for RPS10P7 Gene

Sources for RPS10P7 Gene

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