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Aliases for RPS10P5 Gene

Aliases for RPS10P5 Gene

  • Ribosomal Protein S10 Pseudogene 5 2 3
  • RPS10L 3 4 5
  • Putative 40S Ribosomal Protein S10-Like Protein 3
  • Ribosomal Protein S10-Like 2
  • RPS10_13_1677 3
  • BA371L19.2 3

External Ids for RPS10P5 Gene

Previous HGNC Symbols for RPS10P5 Gene

  • RPS10L

Previous GeneCards Identifiers for RPS10P5 Gene

  • GC20M000767

Summaries for RPS10P5 Gene

GeneCards Summary for RPS10P5 Gene

RPS10P5 (Ribosomal Protein S10 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS10P5 Gene

Genomics for RPS10P5 Gene

Regulatory Elements for RPS10P5 Gene

Enhancers for RPS10P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around RPS10P5 on UCSC Golden Path with GeneCards custom track

Promoters for RPS10P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RPS10P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS10P5 Gene

Chromosome:
20
Start:
839,401 bp from pter
End:
840,020 bp from pter
Size:
620 bases
Orientation:
Minus strand

Genomic View for RPS10P5 Gene

Genes around RPS10P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS10P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS10P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS10P5 Gene

Proteins for RPS10P5 Gene

  • Protein details for RPS10P5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NQ39-RS10L_HUMAN
    Recommended name:
    Putative 40S ribosomal protein S10-like
    Protein Accession:
    Q9NQ39

    Protein attributes for RPS10P5 Gene

    Size:
    176 amino acids
    Molecular mass:
    20120 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RPS10P5 Gene

Post-translational modifications for RPS10P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS10P5 Gene

Domains & Families for RPS10P5 Gene

Protein Domains for RPS10P5 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for RPS10P5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9NQ39

UniProtKB/Swiss-Prot:

RS10L_HUMAN :
  • Belongs to the ribosomal protein S10e family.
Family:
  • Belongs to the ribosomal protein S10e family.
genes like me logo Genes that share domains with RPS10P5: view

No data available for Gene Families for RPS10P5 Gene

Function for RPS10P5 Gene

Gene Ontology (GO) - Molecular Function for RPS10P5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003735 structural constituent of ribosome IBA --
genes like me logo Genes that share ontologies with RPS10P5: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS10P5 Gene

Localization for RPS10P5 Gene

Gene Ontology (GO) - Cellular Components for RPS10P5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0022627 cytosolic small ribosomal subunit IBA --
genes like me logo Genes that share ontologies with RPS10P5: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for RPS10P5 Gene

Pathways & Interactions for RPS10P5 Gene

SuperPathways for RPS10P5 Gene

No Data Available

Interacting Proteins for RPS10P5 Gene

Selected Interacting proteins: Q9NQ39-RS10L_HUMAN for RPS10P5 Gene via IID

Gene Ontology (GO) - Biological Process for RPS10P5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000028 ribosomal small subunit assembly IBA --
genes like me logo Genes that share ontologies with RPS10P5: view

No data available for Pathways by source and SIGNOR curated interactions for RPS10P5 Gene

Drugs & Compounds for RPS10P5 Gene

No Compound Related Data Available

Transcripts for RPS10P5 Gene

mRNA/cDNA for RPS10P5 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS10P5 Gene

No ASD Table

Relevant External Links for RPS10P5 Gene

GeneLoc Exon Structure for
RPS10P5
ECgene alternative splicing isoforms for
RPS10P5

Expression for RPS10P5 Gene

mRNA expression in normal human tissues for RPS10P5 Gene

mRNA differential expression in normal tissues according to GTEx for RPS10P5 Gene

This gene is overexpressed in Whole Blood (x4.8).

Protein differential expression in normal tissues from HIPED for RPS10P5 Gene

This gene is overexpressed in Bone (21.3), Peripheral blood mononuclear cells (12.3), Cervix (11.7), and Blymphocyte (7.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for RPS10P5 Gene



NURSA nuclear receptor signaling pathways regulating expression of RPS10P5 Gene:

RPS10P5
genes like me logo Genes that share expression patterns with RPS10P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS10P5 Gene

Orthologs for RPS10P5 Gene

Evolution for RPS10P5 Gene

ENSEMBL:
Gene Tree for RPS10P5 (if available)
TreeFam:
Gene Tree for RPS10P5 (if available)

No data available for Orthologs for RPS10P5 Gene

Paralogs for RPS10P5 Gene

(3) SIMAP similar genes for RPS10P5 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RPS10P5: view

No data available for Paralogs for RPS10P5 Gene

Variants for RPS10P5 Gene

Relevant External Links for RPS10P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS10P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS10P5 Gene

Disorders for RPS10P5 Gene

No disorders were found for RPS10P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS10P5 Gene

Publications for RPS10P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 65
  2. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3 4 65
  3. A census of human soluble protein complexes. (PMID: 22939629) Havugimana P.C. … Emili A. (Cell 2012) 3 65
  4. Importin 8 is a gene silencing factor that targets argonaute proteins to distinct mRNAs. (PMID: 19167051) Weinmann L. … Meister G. (Cell 2009) 3 65

Products for RPS10P5 Gene

Sources for RPS10P5 Gene

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