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Aliases for RPS10P21 Gene

Subcategory (RNA class) for RPS10P21 Gene

lncRNA

Aliases for RPS10P21 Gene

  • Ribosomal Protein S10 Pseudogene 21 2 3 5
  • RPS10_8_1322 3

External Ids for RPS10P21 Gene

ORGUL Members for RPS10P21 Gene

Previous GeneCards Identifiers for RPS10P21 Gene

  • GC13U900610
  • GC13M072488

Summaries for RPS10P21 Gene

GeneCards Summary for RPS10P21 Gene

RPS10P21 (Ribosomal Protein S10 Pseudogene 21) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS10P21 Gene

Genomics for RPS10P21 Gene

Regulatory Elements for RPS10P21 Gene

Enhancers for RPS10P21 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G071879 1.1 Ensembl ENCODE dbSUPER 0.3 +34.9 34922 0.5 CTCF FOXA2 RAD21 SMARCA4 POLR2A SMC3 HMBOX1 TRIM28 DACH1 RPS10P21
GH13G071872 0.8 ENCODE 0.3 +40.4 40367 3.1 LEF1 PKNOX1 ARNT FEZF1 ZNF384 FOXM1 CTBP1 TCF7L2 TSHZ1 ZNF843 DACH1 RPS10P21
GH13G071876 0.6 ENCODE 0.3 +36.9 36937 0.8 SCRT1 L3MBTL2 TEAD4 MAX FEZF1 CHD7 HDAC2 SCRT2 PRDM1 EZH2 DACH1 RPS10P21
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS10P21 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS10P21 Gene

Chromosome:
13
Start:
71,913,702 bp from pter
End:
71,914,178 bp from pter
Size:
477 bases
Orientation:
Minus strand

Genomic View for RPS10P21 Gene

Genes around RPS10P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS10P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS10P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS10P21 Gene

Proteins for RPS10P21 Gene

Post-translational modifications for RPS10P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS10P21 Gene

Domains & Families for RPS10P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS10P21 Gene

Function for RPS10P21 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS10P21 Gene

Localization for RPS10P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS10P21 Gene

Pathways & Interactions for RPS10P21 Gene

SuperPathways for RPS10P21 Gene

No Data Available

Interacting Proteins for RPS10P21 Gene

Gene Ontology (GO) - Biological Process for RPS10P21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS10P21 Gene

Drugs & Compounds for RPS10P21 Gene

No Compound Related Data Available

Transcripts for RPS10P21 Gene

mRNA/cDNA for RPS10P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS10P21 Gene

No ASD Table

Relevant External Links for RPS10P21 Gene

GeneLoc Exon Structure for
RPS10P21
ECgene alternative splicing isoforms for
RPS10P21

Expression for RPS10P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS10P21 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS10P21 Gene:

RPS10P21
genes like me logo Genes that share expression patterns with RPS10P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS10P21 Gene

Orthologs for RPS10P21 Gene

Evolution for RPS10P21 Gene

ENSEMBL:
Gene Tree for RPS10P21 (if available)
TreeFam:
Gene Tree for RPS10P21 (if available)

No data available for Orthologs for RPS10P21 Gene

Paralogs for RPS10P21 Gene

No data available for Paralogs for RPS10P21 Gene

Variants for RPS10P21 Gene

Relevant External Links for RPS10P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS10P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS10P21 Gene

Disorders for RPS10P21 Gene

Relevant External Links for RPS10P21

Genetic Association Database (GAD)
RPS10P21

No disorders were found for RPS10P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS10P21 Gene

Publications for RPS10P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64

Products for RPS10P21 Gene

Sources for RPS10P21 Gene

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