Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPLP1P7 Gene

Aliases for RPLP1P7 Gene

  • Ribosomal Protein Lateral Stalk Subunit P1 Pseudogene 7 2 3
  • Ribosomal Protein, Large, P1 Pseudogene 7 2 3
  • RP11-395C3.1 5
  • RPLP1_4_611 3

External Ids for RPLP1P7 Gene

Previous GeneCards Identifiers for RPLP1P7 Gene

  • GC05M125993

Summaries for RPLP1P7 Gene

GeneCards Summary for RPLP1P7 Gene

RPLP1P7 (Ribosomal Protein Lateral Stalk Subunit P1 Pseudogene 7) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPLP1P7 Gene

Genomics for RPLP1P7 Gene

Regulatory Elements for RPLP1P7 Gene

Enhancers for RPLP1P7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F126592 0.6 ENCODE 12.7 +34.1 34077 3.1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS ZNF263 SP3 ALDH7A1 RPLP1P7 TEX43 LOC105379161 GRAMD3 RNU6-290P
GH05F126664 0.2 ENCODE 12.4 -36.5 -36466 1.5 PKNOX1 ZNF76 INSM2 FEZF1 ZNF2 ZNF121 ZNF366 SCRT2 ZNF391 OVOL3 ALDH7A1 TEX43 RPLP1P7 PHAX BOLA3P3 LOC105379162
GH05F126591 0.5 ENCODE 12.1 +36.7 36705 0.3 ZNF664 KDM1A RPLP1P7 TEX43 LOC105379161 GRAMD3 ALDH7A1 RNU6-290P
GH05F126543 0.7 ENCODE 11.2 +84.6 84550 0.9 CTCF MXI1 ZNF654 SAP130 MLX FOXA3 REST RAD21 KLF16 ZNF143 ALDH7A1 PHAX RPLP1P7 TEX43 LOC105379161 GRAMD3 GC05M126556 ENSG00000279118
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPLP1P7 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPLP1P7 Gene

Chromosome:
5
Start:
126,627,979 bp from pter
End:
126,628,448 bp from pter
Size:
470 bases
Orientation:
Minus strand

Genomic View for RPLP1P7 Gene

Genes around RPLP1P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPLP1P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPLP1P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPLP1P7 Gene

Proteins for RPLP1P7 Gene

Post-translational modifications for RPLP1P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPLP1P7 Gene

Domains & Families for RPLP1P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPLP1P7 Gene

Function for RPLP1P7 Gene

Phenotypes for RPLP1P7 Gene

GenomeRNAi human phenotypes for RPLP1P7:
genes like me logo Genes that share phenotypes with RPLP1P7: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPLP1P7 Gene

Localization for RPLP1P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPLP1P7 Gene

Pathways & Interactions for RPLP1P7 Gene

SuperPathways for RPLP1P7 Gene

No Data Available

Interacting Proteins for RPLP1P7 Gene

Gene Ontology (GO) - Biological Process for RPLP1P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPLP1P7 Gene

Transcripts for RPLP1P7 Gene

mRNA/cDNA for RPLP1P7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPLP1P7 Gene

No ASD Table

Relevant External Links for RPLP1P7 Gene

GeneLoc Exon Structure for
RPLP1P7
ECgene alternative splicing isoforms for
RPLP1P7

Expression for RPLP1P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPLP1P7 Gene

mRNA differential expression in normal tissues according to GTEx for RPLP1P7 Gene

This gene is overexpressed in Colon - Transverse (x5.3).

NURSA nuclear receptor signaling pathways regulating expression of RPLP1P7 Gene:

RPLP1P7
genes like me logo Genes that share expression patterns with RPLP1P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPLP1P7 Gene

Orthologs for RPLP1P7 Gene

Evolution for RPLP1P7 Gene

ENSEMBL:
Gene Tree for RPLP1P7 (if available)
TreeFam:
Gene Tree for RPLP1P7 (if available)

No data available for Orthologs for RPLP1P7 Gene

Paralogs for RPLP1P7 Gene

No data available for Paralogs for RPLP1P7 Gene

Variants for RPLP1P7 Gene

Relevant External Links for RPLP1P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPLP1P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPLP1P7 Gene

Disorders for RPLP1P7 Gene

No disorders were found for RPLP1P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPLP1P7 Gene

Publications for RPLP1P7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for RPLP1P7 Gene

Sources for RPLP1P7 Gene

Content
Loading form....