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Aliases for RPLP0P2 Gene

Aliases for RPLP0P2 Gene

  • Ribosomal Protein Lateral Stalk Subunit P0 Pseudogene 2 2 3 5
  • Ribosomal Protein, Large, P0 Pseudogene 2 2 3
  • Ribosomal Protein P0 Pseudogene 2 3
  • RPLP0_3_1146 3
  • RPLP0L2 3

External Ids for RPLP0P2 Gene

Previous GeneCards Identifiers for RPLP0P2 Gene

  • GC11P063917
  • GC11P062958
  • GC11P061167
  • GC11P061157
  • GC11P061139
  • GC11P061382
  • GC11P057710

Summaries for RPLP0P2 Gene

GeneCards Summary for RPLP0P2 Gene

RPLP0P2 (Ribosomal Protein Lateral Stalk Subunit P0 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPLP0P2 Gene

Genomics for RPLP0P2 Gene

Regulatory Elements for RPLP0P2 Gene

Enhancers for RPLP0P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F062419 1 Ensembl ENCODE 6.4 +804.9 804922 1.4 PKNOX1 TAL1 INSM2 FEZF1 ZFHX2 ZNF366 SCRT2 PRDM10 KLF8 ZBTB20 ASRGL1 RPLP0P2 LOC102723765 SCGB1A1
GH11F062417 0.7 ENCODE 6.5 +803.4 803425 1.1 ESRRA L3MBTL2 NR2F1 ZEB2 DPF2 TFDP1 SMARCA4 IKZF1 NR2F6 NR2C2 RPLP0P2 ASRGL1 INCENP LOC102723765 SCGB1A1
GH11F061598 1.3 Ensembl ENCODE 0.4 -13.6 -13578 5.3 HDGF PKNOX1 ARNT MLX ARID4B DMAP1 ZNF48 YY1 GATA2 FOS DAGLA DKFZP434K028 MYRF SDHAF2 LOC101927495 RPLP0P2
GH11F061608 1.2 Ensembl ENCODE 0.4 -5.5 -5541 2.0 ATF1 MLX ARID4B ZNF48 SLC30A9 FOS SP5 MIER2 REST PPARG SYT7 DAGLA TMEM216 RPLP0P2 LOC101927495
GH11F061625 1.1 Ensembl ENCODE 0.4 +12.4 12372 3.7 ATF1 ARID4B SIN3A ZNF48 RAD21 ELK1 ZNF143 ZNF654 ZNF680 MIER2 DAGLA SYT7 MYRF DKFZP434K028 GC11P061636 RPLP0P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPLP0P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPLP0P2 Gene

Chromosome:
11
Start:
61,615,036 bp from pter
End:
61,639,449 bp from pter
Size:
24,414 bases
Orientation:
Plus strand

Genomic View for RPLP0P2 Gene

Genes around RPLP0P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPLP0P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPLP0P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPLP0P2 Gene

Proteins for RPLP0P2 Gene

Post-translational modifications for RPLP0P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPLP0P2 Gene

Domains & Families for RPLP0P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPLP0P2 Gene

Function for RPLP0P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPLP0P2 Gene

Localization for RPLP0P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPLP0P2 Gene

Pathways & Interactions for RPLP0P2 Gene

SuperPathways for RPLP0P2 Gene

No Data Available

Interacting Proteins for RPLP0P2 Gene

Gene Ontology (GO) - Biological Process for RPLP0P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPLP0P2 Gene

Transcripts for RPLP0P2 Gene

mRNA/cDNA for RPLP0P2 Gene

(4) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPLP0P2 Gene

Ribosomal protein, large, P0 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPLP0P2 Gene

No ASD Table

Relevant External Links for RPLP0P2 Gene

GeneLoc Exon Structure for
RPLP0P2
ECgene alternative splicing isoforms for
RPLP0P2

Expression for RPLP0P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPLP0P2 Gene

mRNA differential expression in normal tissues according to GTEx for RPLP0P2 Gene

This gene is overexpressed in Prostate (x6.0).

NURSA nuclear receptor signaling pathways regulating expression of RPLP0P2 Gene:

RPLP0P2

SOURCE GeneReport for Unigene cluster for RPLP0P2 Gene:

Hs.502733
genes like me logo Genes that share expression patterns with RPLP0P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPLP0P2 Gene

Orthologs for RPLP0P2 Gene

Evolution for RPLP0P2 Gene

ENSEMBL:
Gene Tree for RPLP0P2 (if available)
TreeFam:
Gene Tree for RPLP0P2 (if available)

No data available for Orthologs for RPLP0P2 Gene

Paralogs for RPLP0P2 Gene

No data available for Paralogs for RPLP0P2 Gene

Variants for RPLP0P2 Gene

Sequence variations from dbSNP and Humsavar for RPLP0P2 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs10897169 -- 61,629,851(+) GAGGC(A/G)ATGGA intron-variant
rs10897170 -- 61,633,132(+) CCTGT(A/T)AGGAA intron-variant
rs10897171 -- 61,633,350(+) TGAGA(C/T)GGAGT intron-variant
rs111288624 -- 61,634,998(+) CCTCC(C/G)GAGTA intron-variant
rs111541570 -- 61,616,114(+) AACAC(A/G)AATTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPLP0P2 Gene

Variant ID Type Subtype PubMed ID
nsv832179 CNV loss 17160897
nsv983030 CNV duplication 23825009

Relevant External Links for RPLP0P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPLP0P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPLP0P2 Gene

Disorders for RPLP0P2 Gene

Relevant External Links for RPLP0P2

Genetic Association Database (GAD)
RPLP0P2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPLP0P2

No disorders were found for RPLP0P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPLP0P2 Gene

Publications for RPLP0P2 Gene

  1. Long noncoding RNA expression profiles of lung adenocarcinoma ascertained by microarray analysis. (PMID: 25089627) Xu G. … Wang Y. (PLoS ONE 2014) 2 3 64
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  3. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi D.J. … Shiio Y. (J. Proteome Res. 2014) 3 64
  4. Genetic loci associated with plasma phospholipid n-3 fatty acids: a meta-analysis of genome-wide association studies from the CHARGE Consortium. (PMID: 21829377) Lemaitre R.N. … Steffen L.M. (PLoS Genet. 2011) 46 64
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for RPLP0P2 Gene

Sources for RPLP0P2 Gene

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