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Aliases for RPLP0P2 Gene

Aliases for RPLP0P2 Gene

  • Ribosomal Protein, Large, P0 Pseudogene 2 2 3
  • Ribosomal Protein P0 Pseudogene 2 3
  • RPLP0_3_1146 3
  • RPLP0L2 3

External Ids for RPLP0P2 Gene

Summaries for RPLP0P2 Gene

GeneCards Summary for RPLP0P2 Gene

RPLP0P2 (Ribosomal Protein, Large, P0 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPLP0P2 Gene

Genomics for RPLP0P2 Gene

Genomic Location for RPLP0P2 Gene

Start:
61,615,036 bp from pter
End:
61,639,449 bp from pter
Size:
24,414 bases
Orientation:
Plus strand

Genomic View for RPLP0P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RPLP0P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPLP0P2 Gene

Regulatory Elements for RPLP0P2 Gene

Proteins for RPLP0P2 Gene

Post-translational modifications for RPLP0P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPLP0P2 Gene

Domains for RPLP0P2 Gene

Gene Families for RPLP0P2 Gene

HGNC:
  • RPL :L ribosomal proteins
genes like me logo Genes that share domains with RPLP0P2: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for RPLP0P2 Gene

Function for RPLP0P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RPLP0P2 Gene

Localization for RPLP0P2 Gene

No data available for Gene Ontology (GO) - Cellular Components for RPLP0P2 Gene

Pathways for RPLP0P2 Gene

SuperPathways for RPLP0P2 Gene

No Data Available

Interacting Proteins for RPLP0P2 Gene

Gene Ontology (GO) - Biological Process for RPLP0P2 Gene

None

No data available for Pathways by source for RPLP0P2 Gene

Transcripts for RPLP0P2 Gene

mRNA/cDNA for RPLP0P2 Gene

(4) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPLP0P2 Gene

Ribosomal protein, large, P0 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPLP0P2 Gene

No ASD Table

Relevant External Links for RPLP0P2 Gene

GeneLoc Exon Structure for
RPLP0P2
ECgene alternative splicing isoforms for
RPLP0P2

Expression for RPLP0P2 Gene

mRNA expression in normal human tissues for RPLP0P2 Gene

mRNA differential expression in normal tissues according to GTEx for RPLP0P2 Gene

This gene is overexpressed in Prostate (6.0).

SOURCE GeneReport for Unigene cluster for RPLP0P2 Gene Hs.502733

genes like me logo Genes that share expressions with RPLP0P2: view

Orthologs for RPLP0P2 Gene

Evolution for RPLP0P2 Gene

ENSEMBL:
Gene Tree for RPLP0P2 (if available)
TreeFam:
Gene Tree for RPLP0P2 (if available)

No data available for Orthologs for RPLP0P2 Gene

Paralogs for RPLP0P2 Gene

No data available for Paralogs for RPLP0P2 Gene

Variants for RPLP0P2 Gene

Sequence variations from dbSNP and Humsavar for RPLP0P2 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs169167 -- 61,622,130(-) CCCTG(G/T)GGGGA intron-variant
rs198748 -- 61,616,961(-) ctgac(C/G)tcagg intron-variant
rs198749 -- 61,620,544(-) GGCTC(C/T)CCCTT intron-variant
rs198750 -- 61,620,618(-) AGCCA(A/G)CCATG intron-variant
rs198751 -- 61,620,885(-) CCAAG(C/T)TGGAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPLP0P2 Gene

Variant ID Type Subtype PubMed ID
nsv832179 CNV Loss 17160897

Relevant External Links for RPLP0P2 Gene

HapMap Linkage Disequilibrium report
RPLP0P2

Disorders for RPLP0P2 Gene

Relevant External Links for RPLP0P2

Genetic Association Database (GAD)
RPLP0P2
genes like me logo Genes that share disorders with RPLP0P2: view

No data available for UniProtKB/Swiss-Prot for RPLP0P2 Gene

Publications for RPLP0P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3
  2. Long noncoding RNA expression profiles of lung adenocarcinoma ascertained by microarray analysis. (PMID: 25089627) Xu G. … Wang Y. (PLoS ONE 2014) 2 3
  3. Genetic loci associated with plasma phospholipid n-3 fatty acids: a meta-analysis of genome-wide association studies from the CHARGE Consortium. (PMID: 21829377) Lemaitre R.N. … Steffen L.M. (PLoS Genet. 2011) 49
  4. Identification of ubiquitinated proteins from human multiple myeloma U266 cells by proteomics. (PMID: 22108332) Jia H. … He Q. (Biomed. Environ. Sci. 2011) 3
  5. Activity-based chemical proteomics accelerates inhibitor development for deubiquitylating enzymes. (PMID: 22118674) Altun M. … Kessler B.M. (Chem. Biol. 2011) 3

Products for RPLP0P2 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RPLP0P2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for RPLP0P2
    • Block miRNA regulation of RPLP0P2 using miScript Target Protectors

    Sources for RPLP0P2 Gene

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