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Aliases for RPLP0P2 Gene

Aliases for RPLP0P2 Gene

  • Ribosomal Protein, Large, P0 Pseudogene 2 2 3
  • Ribosomal Protein P0 Pseudogene 2 3
  • RPLP0_3_1146 3
  • RPLP0L2 3

External Ids for RPLP0P2 Gene

Previous GeneCards Identifiers for RPLP0P2 Gene

  • GC11P063917
  • GC11P062958
  • GC11P061167
  • GC11P061157
  • GC11P061139
  • GC11P061382
  • GC11P057710

Summaries for RPLP0P2 Gene

GeneCards Summary for RPLP0P2 Gene

RPLP0P2 (Ribosomal Protein, Large, P0 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPLP0P2 Gene

Genomics for RPLP0P2 Gene

Regulatory Elements for RPLP0P2 Gene

Genomic Location for RPLP0P2 Gene

Start:
61,615,036 bp from pter
End:
61,639,449 bp from pter
Size:
24,414 bases
Orientation:
Plus strand

Genomic View for RPLP0P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RPLP0P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPLP0P2 Gene

Proteins for RPLP0P2 Gene

Post-translational modifications for RPLP0P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPLP0P2 Gene

Domains for RPLP0P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPLP0P2 Gene

Function for RPLP0P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPLP0P2 Gene

Localization for RPLP0P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPLP0P2 Gene

Pathways for RPLP0P2 Gene

SuperPathways for RPLP0P2 Gene

No Data Available

Interacting Proteins for RPLP0P2 Gene

Gene Ontology (GO) - Biological Process for RPLP0P2 Gene

None

No data available for Pathways by source for RPLP0P2 Gene

Transcripts for RPLP0P2 Gene

mRNA/cDNA for RPLP0P2 Gene

(6) Selected AceView cDNA sequences:
(4) Additional mRNA sequences :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPLP0P2 Gene

Ribosomal protein, large, P0 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPLP0P2 Gene

No ASD Table

Relevant External Links for RPLP0P2 Gene

GeneLoc Exon Structure for
RPLP0P2
ECgene alternative splicing isoforms for
RPLP0P2

Expression for RPLP0P2 Gene

mRNA expression in normal human tissues for RPLP0P2 Gene

mRNA differential expression in normal tissues according to GTEx for RPLP0P2 Gene

This gene is overexpressed in Prostate (6.0).

SOURCE GeneReport for Unigene cluster for RPLP0P2 Gene Hs.502733

genes like me logo Genes that share expressions with RPLP0P2: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for RPLP0P2 Gene

Orthologs for RPLP0P2 Gene

Evolution for RPLP0P2 Gene

ENSEMBL:
Gene Tree for RPLP0P2 (if available)
TreeFam:
Gene Tree for RPLP0P2 (if available)

No data available for Orthologs for RPLP0P2 Gene

Paralogs for RPLP0P2 Gene

No data available for Paralogs for RPLP0P2 Gene

Variants for RPLP0P2 Gene

Sequence variations from dbSNP and Humsavar for RPLP0P2 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs169167 -- 61,622,130(-) CCCTG(G/T)GGGGA intron-variant
rs198748 -- 61,616,961(-) ctgac(C/G)tcagg intron-variant
rs198749 -- 61,620,544(-) GGCTC(C/T)CCCTT intron-variant
rs198750 -- 61,620,618(-) AGCCA(A/G)CCATG intron-variant
rs198751 -- 61,620,885(-) CCAAG(C/T)TGGAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPLP0P2 Gene

Variant ID Type Subtype PubMed ID
nsv832179 CNV Loss 17160897

Relevant External Links for RPLP0P2 Gene

HapMap Linkage Disequilibrium report
RPLP0P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RPLP0P2 Gene

Disorders for RPLP0P2 Gene

Relevant External Links for RPLP0P2

Genetic Association Database (GAD)
RPLP0P2

No disorders were found for RPLP0P2 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for RPLP0P2 Gene

Publications for RPLP0P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3
  2. Long noncoding RNA expression profiles of lung adenocarcinoma ascertained by microarray analysis. (PMID: 25089627) Xu G. … Wang Y. (PLoS ONE 2014) 2 3
  3. Genetic loci associated with plasma phospholipid n-3 fatty acids: a meta-analysis of genome-wide association studies from the CHARGE Consortium. (PMID: 21829377) Lemaitre R.N. … Steffen L.M. (PLoS Genet. 2011) 48
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for RPLP0P2 Gene

Sources for RPLP0P2 Gene

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