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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

RPLP0 Gene

protein-coding   GIFtS: 61
GCID: GC12M120634

ribosomal protein, large, P0

 Explore 25 diseases affiliated with
RPLP0 via our new
 Human Malady Compendium 
Biological research products
for RPLP0
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ribosomal Protein, Large, P01 2     RPP01 2
L10E1 2     60S Ribosomal Protein L10E2 3
LP01 2     60S Acidic Ribosomal Protein P02
P01 2     Acidic Ribosomal Phosphoprotein P02
PRLP01 2     

External Ids:    HGNC: 103711   Entrez Gene: 61752   Ensembl: ENSG000000891577   OMIM: 1805105   UniProtKB: P053883   

Export aliases for RPLP0 gene to outside databases

Previous GC identifers: GC12M119507 GC12M120161 GC12M120417 GC12M119046 GC12M119097 GC12M117643


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for RPLP0:
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit.
Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene
encodes a ribosomal protein that is a component of the 60S subunit. The protein, which is the functional equivalent of
the E. coli L10 ribosomal protein, belongs to the L10P family of ribosomal proteins. It is a neutral phosphoprotein
with a C-terminal end that is nearly identical to the C-terminal ends of the acidic ribosomal phosphoproteins P1 and
P2. The P0 protein can interact with P1 and P2 to form a pentameric complex consisting of P1 and P2 dimers, and a P0
monomer. The protein is located in the cytoplasm. Transcript variants derived from alternative splicing exist; they
encode the same protein. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes
of this gene dispersed through the genome. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: RLA0_HUMAN, P05388
Function: Ribosomal protein P0 is the functional equivalent of E.coli protein L10

Gene Wiki entry for RPLP0


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000012.11  NC_018923.1  NT_009775.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the RPLP0 gene promoter:
         GR   GR-beta   NRSF form 1   ATF-2   NRSF form 2   E47   COMP1   c-Jun   GR-alpha   Pax-4a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidRPLP0 promoter sequence
   Search SABiosciences Chromatin IP Primers for RPLP0

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RPLP0


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12q24.2   Ensembl cytogenetic band:  12q24.23   HGNC cytogenetic band: 12q24.2

RPLP0 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RPLP0 gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12M120634:  view genomic region     (about GC identifiers)

Start:
120,634,489 bp from pter      End:
120,639,038 bp from pter
Size:
4,550 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: RLA0_HUMAN, P05388 (See protein sequence)
Recommended Name: 60S acidic ribosomal protein P0  
Size: 317 amino acids; 34274 Da
Subunit: P0 forms a pentameric complex by interaction with dimers of P1 and P2. Identified in a mRNP granule complex,
at least composed of ACTB, ACTN4, DHX9, ERG, HNRNPA1, HNRNPA2B1, HNRNPAB, HNRNPD, HNRNPL, HNRNPR, HNRNPU, HSPA1,
HSPA8, IGF2BP1, ILF2, ILF3, NCBP1, NCL, PABPC1, PABPC4, PABPN1, RPLP0, RPS3, RPS3A, RPS4X, RPS8, RPS9, SYNCRIP,
TROVE2, YBX1 and untranslated mRNAs. Interacts with Lassa virus Z protein. Interacts with APEX1
Subcellular location: Nucleus. Cytoplasm. Note=Localized in cytoplasmic mRNP granules containing untranslated mRNAs
Secondary accessions: Q9BVK4

Explore the universe of human proteins at neXtProt for RPLP0: NX_P05388

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P05388

  • RPLP0 Protein expression data from MOPED and PaxDb:    About this image 
    RPLP0 Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_000993.1  NP_444505.1  

    ENSEMBL proteins: 
     ENSP00000376299   ENSP00000449328   ENSP00000446777   ENSP00000366471   ENSP00000449205  
     ENSP00000448919   ENSP00000448639   ENSP00000447311   ENSP00000450222   ENSP00000449854  
     ENSP00000450019   ENSP00000448046   ENSP00000450121   ENSP00000449765   ENSP00000448223  
     ENSP00000339027  
    Reactome Protein details: P05388
    Human Recombinant Protein Products for RPLP0: 
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    ProSpec Recombinant Protein for RPLP0
    Uscn Proteins for RPLP0

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA19188445
    GO:0005737cytoplasm IDA--
    GO:0005829cytosol TAS--
    GO:0005840ribosome ----
    GO:0022625cytosolic large ribosomal subunit IDA12962325

    RPLP0 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    RPLP0 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR001813 Ribosomal_60S
     IPR001790 Ribosomal_L10/acidic_P0

    Graphical View of Domain Structure for InterPro Entry P05388

    ProtoNet protein and cluster: P05388

    1 Blocks protein family: IPB001813 60S Acidic ribosomal protein

    UniProtKB/Swiss-Prot: RLA0_HUMAN, P05388
    Similarity: Belongs to the ribosomal protein L10P family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: RLA0_HUMAN, P05388
    Function: Ribosomal protein P0 is the functional equivalent of E.coli protein L10

         Genatlas biochemistry entry for RPLP0:
    60S acidic ribosomal protein P0,110p family,equivalent of E Coli protein L10

         Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003723RNA binding TAS3323886
    GO:0003735structural constituent of ribosome NAS12962325
    GO:0005515protein binding IPI15303970
         
    RPLP0 for ontologies           About GeneDecksing


    Phenotypes:
         4 GenomeRNAi human phenotypes for RPLP0:
     Decreased cell number, increas  Nuclear 60S biogenesis defects  Nucleolar pre-40S maturation d  S arrest 

    Animal Models:
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Synthesis of PB1-F2
    8/26 pathways (see all 26)
    Viral Protein Synthesis1.00
    Cytoplasmic Ribosomal Proteins0.86
    Viral mRNA Translation1.00
    CFTR translational fidelity (class I mutations)0.83
    Influenza Viral RNA Transcription and Replication1.00
    SMG6 Cleaves mRNA with Premature Termination Codon0.80
    Synthesis of nascent polypeptide containing signal sequence1.00
    L13a-mediated translational silencing of Ceruloplasmin expression0.79
    2Metabolism of mRNA
    Metabolism of mRNA1.00
    Metabolism of RNA0.92
    3Disease
    Disease1.00
    4Generic Transcription Pathway
    Gene Expression0.46
    5Asparagine N-linked glycosylation
    Metabolism of proteins0.15

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 GeneGo (Thomson Reuters) Pathway for RPLP0
        CFTR translational fidelity (class I mutations)

    1 BioSystems Pathway for RPLP0 
        Cytoplasmic Ribosomal Proteins

    5/28        Reactome Pathways for RPLP0 (see all 28)
        Nonsense Mediated Decay Independent of the Exon Junction Complex
    Nonsense-Mediated Decay
    Translation
    SRP-dependent cotranslational protein targeting to membrane
    Eukaryotic Translation Initiation


    1         Kegg Pathway  (Kegg details for RPLP0):
        Ribosome


    RPLP0 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for RPLP0

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/1230 Interacting proteins for RPLP0 (P053881, 2, 3 ENSP000003390274) via UniProtKB, MINT, STRING, and/or I2D (see all 1230)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H4AP628053I2D: score=4 
    HIST1H4BP628053I2D: score=4 
    HIST1H4CP628053I2D: score=4 
    HIST1H4DP628053I2D: score=4 
    HIST1H4EP628053I2D: score=4 
    About this table

    Gene Ontology (GO): 5/16 biological process terms (GO ID links to tree view) (see all 16):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS--
    GO:0006412translation TAS--
    GO:0006413translational initiation TAS--
    GO:0006414translational elongation TAS--
    GO:0006415translational termination TAS--

    RPLP0 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    RPLP0 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for RPLP0
    2 Novoseek chemical compound relationships for RPLP0 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    glyceraldehyde 3-phosphate 29.8 2 16220529 (1), 17196660 (1)
    atp 0 1 16220529 (1)

    Search CenterWatch for drugs/clinical trials and news about RPLP0 / RLA0 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for RPLP0 gene (2 alternative transcripts): 
    NM_001002.3  NM_053275.3  

    Unigene Cluster for RPLP0:

    Ribosomal protein, large, P0
    Hs.546285  [show with all ESTs]
    Unigene Representative Sequence: BQ051850
    18/27 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 27):
    ENST00000392514(uc001txq.3 uc001txr.3) ENST00000551217 ENST00000551150
    ENST00000552292 ENST00000313104 ENST00000546989 ENST00000552461 ENST00000549098
    ENST00000551258 ENST00000546990 ENST00000547475 ENST00000547211 ENST00000547173
    ENST00000550856 ENST00000548568 ENST00000546564 ENST00000547191 ENST00000550296


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    Additional cDNA sequence: 

    AF274958.1 AK129754.1 AK129823.1 AK222468.1 AK222571.1 AK291109.1 AK304674.1 BC000087.2 
    BC000345.2 BC000752.2 BC001127.2 BC001834.2 BC003655.2 BC005863.2 BC008092.1 BC008594.1 
    BC009867.2 BC015173.1 BC015690.1 BC019014.2 BC070194.1 BC104645.1 BC107717.1 M17885.1 
    Z36785.1 

    24/188 DOTS entries (see all 188):

    DT.95271968  DT.91662095  DT.100749119  DT.100749070  DT.121112660  DT.100749104  DT.100749359  DT.121112710 
    DT.121000  DT.100749303  DT.100749211  DT.99953823  DT.98083336  DT.100749135  DT.95271857  DT.101957822 
    DT.95146787  DT.100749247  DT.91903137  DT.100749102  DT.100749056  DT.95272037  DT.95272013  DT.95272022 

    24/34 AceView cDNA sequences (see all 34):

    CR597824 BC015173 BC008092 CR613873 AK129823 BC000752 D28418 AK129754 
    BC003655 BC000087 BC001834 BC005863 BC015690 NM_001002 BC019014 BC009867 
    CR602521 BC008594 CR625189 NM_053275 BC001127 CR625036 CR600402 CR599043 

    GeneLoc Exon Structure

    5/16 Alternative Splicing Database (ASD) splice patterns (SP) for RPLP0 (see all 16)    About this scheme

    ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b · 6c · 6d ^ 7 ^ 8 ^ 9a · 9b ^ 10a · 10b · 10c · 10d ^ 11a ·
    SP1:                                -                 -     -                                               -                 -                                 
    SP2:                                -                                                                       -     -     -     -                                 
    SP3:                                -                                                                 -                       -                                 
    SP4:                                                                                                        -                 -                                 
    SP5:                                -                                   -     -     -     -     -     -     -                 -                                 

    ExUns: 11b · 11c · 11d
    SP1:                  
    SP2:                  
    SP3:                  
    SP4:                  
    SP5:                  


    ECgene alternative splicing isoforms for RPLP0

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    RPLP0 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTCAACATCT
    RPLP0 Expression
    About this image

    RPLP0 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    HeartAtrioventricular CanalAtrioventricular Canal CellsMyocardium
    HeartOutflow TractHeart
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See RPLP0 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for RPLP0

    SOURCE GeneReport for Unigene cluster: Hs.546285
        SABiosciences Expression via Pathway-Focused PCR Arrays including RPLP0 (see all 148): 
              Antiviral Response in human mouse rat
              Multiple Sclerosis in human mouse rat
              Wound Healing in human mouse rat
              Prostate Cancer in human mouse rat
              Drug Metabolism: Phase I Enzymes in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for RPLP0 gene from 10/40 species (see all 40)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Rplp01 , 5 ribosomal protein, large, P01, 5 90.43(n)1
    97.48(a)1
      5 (56.10 cM)5
    118371  NM_007475.51  NP_031501.11 
     1155594675 
    chicken
    (Gallus gallus)
    Aves RPLP01 ribosomal protein, large, P0 85.02(n)
    95.57(a)
      395835  NM_204987.1  NP_990318.1 
    lizard
    (Anolis carolinensis)
    Reptilia RPLP06
    --
    96(a)
    1 ↔ 1
    GL343338.1(452041-455773)
    African clawed frog
    (Xenopus laevis)
    Amphibia arbp-prov2 acidic ribosomal protein P0 81.56(n)    BC042268.1 
    zebrafish
    (Danio rerio)
    Actinopterygii rplp02 ribosomal protein, large, P0 79.48(n)   58101  BC062854.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta RpP03
    RpLP01
    protein biosynthesis DNA-(apurinic or
    apyrimidinic more3
    Ribosomal protein LP01
    66(a)3
    64.56(n)1
    66.25(a)1
      79B23
    404511  NM_079487.31  NP_524211.11 
    worm
    (Caenorhabditis elegans)
    Secernentea rpa-03
    rla-01
    deoxyribonuclease3
    Protein RLA-01
    65(a)3
    65.17(n)1
    68.27(a)1
      I(10575873-10576820)3
    1729431  NM_060365.61  NP_492766.11 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes RPP0(YLR340W)4
    RPP01
    Conserved ribosomal protein P0 of the ribosomal stalk, more4
    Rpp0p1
    58.36(n)1
    56.07(a)1
      12(805887-806825)4
    8510521, 4  NP_013444.11, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT3G112501 60S acidic ribosomal protein P0-3 56.89(n)
    55.84(a)
      820296  NM_111960.3  NP_187734.1 
    rice
    (Oryza sativa)
    Liliopsida Os08g01305001 hypothetical protein 59.66(n)
    53.82(a)
      4344590  NM_001067458.1  NP_001060923.1 


    ENSEMBL Gene Tree for RPLP0 (if available)
    TreeFam Gene Tree for RPLP0 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for RPLP0 gene
    1 SIMAP similar gene for RPLP0 using alignment to 16 protein entries:     RLA0_HUMAN (see all proteins):
    RPLP0P6

    RPLP0 for paralogs           About GeneDecksing


    5/13 Pseudogenes.org Pseudogenes for RPLP0 (see all 13)
    PGOHUM00000242755 PGOHUM00000261140 PGOHUM00000247769 PGOHUM00000261169 PGOHUM00000235059


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/153 NCBI SNPs in RPLP0 are shown (see all 153    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1416525821,2
    --120634038(+) TAATTA/CTAGTG 3 -- us2k1 ds50010--------
    rs1856807571,2
    --120634168(+) GCATAC/TGGCAC 3 -- ds5001 us2k10--------
    rs79786561,2
    C,F,H--120634289(+) TGCAAC/TATCTC 3 -- us2k1 ds500131Minor allele frequency- T:0.09NS EA NA WA CSA 2779
    rs1470722001,2
    --120634304(+) AAAAAA/GAAATT 3 -- ds5001 us2k10--------
    rs1383897141,2
    C--120634527(+) CTTTAC/TTTCCT 2 -- ut310--------
    rs2020192081,2
    --120634569(+) GCTTTC/TTGGTG 2 -- ut310--------
    rs10511471,2
    C--120634573(-) TAATCA/CCCAAA 2 -- ut312Minor allele frequency- C:0.00NA 4
    rs606568281,2
    C,F--120634612(+) TCCGAC/GTCCTC 4 D E mis12Minor allele frequency- G:0.00WA NA 4088
    rs1380593351,2
    C--120634637(+) CTTCAA/GCCTTA 4 A V mis11Minor allele frequency- G:0.00NA 3484
    rs1900010531,2
    C--120634795(+) CACCAC/G/TCCTCC 2 -- int11EU 1011

    HapMap Linkage Disequilibrium report for RPLP0 (120634489 - 120639038 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for RPLP0: --

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    RPLP0 for disorders           About GeneDecksing

    OMIM gene information: 180510    OMIM disorders: --

    20/25 diseases for RPLP0 (see all 25):    About MalaCards
    distal hereditary motor neuropathy    mixed connective tissue disease    connective tissue disease    lupus erythematosus
    metastasis efficiency    chronic fatigue syndrome    systemic lupus erythematosus    chagas disease
    sjogren's syndrome    hepatocellular carcinoma    endocarditis    colon carcinoma
    neuropathy    pancreatic cancer    cholangiocarcinoma    carcinoma
    breast cancer    pancreatitis    myeloma    obesity

    5 Novoseek disease relationships for RPLP0 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    lupus erythematosus systemic 56.5 1 7876567 (1)
    mimicry 54.5 1 7790824 (1)
    chagas disease 42.9 1 1377223 (1)
    hepatocellular carcinoma 21.9 3 17621266 (2), 1350508 (1)
    tumors 0 1 17621266 (1)


    Export disorders for RPLP0 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for RPLP0 gene, integrated from 9 sources (see all 118):
    (articles sorted by number of sources associating them with RPLP0)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A map of 75 human ribosomal protein genes. (PubMed id 9582194)1, 2, 3 Kenmochi N.... Page D.C. (1998)
    2. APE1/Ref-1 interacts with NPM1 within nucleoli and plays a role in the rRNA quality control process. (PubMed id 19188445)1, 2 Vascotto C....Tell G. (2009)
    3. Molecular composition of IMP1 ribonucleoprotein granules. (PubMed id 17289661)1, 2 Joeson L.... Nielsen F.C. (2007)
    4. The finished DNA sequence of human chromosome 12. (PubMed id 16541075)1, 2 Scherer S.E.... Gibbs R.A. (2006)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    6. Human acidic ribosomal phosphoproteins P0, P1, and P2: analysis of cDNA clones, in vitro synthesis, and assembly. (PubMed id 3323886)1, 2 Rich B.E. and Steitz J.A. (1987)
    7. Ribosomal phosphoprotein P0 interacts with GCIP and overexpression of P0 is associated with cellular proliferation in breast and liver carcinoma cells. (PubMed id 17621266)1, 9 Chang T.-W....Chang M.-C. (2008)
    8. The subcellular distribution of the human ribosomal 'stalk' components: P1, P2 and P0 proteins. (PubMed id 12479870)1, 9 Tchorzewski M....Grankowski N. (2003)
    9. Characterization of Staufen 1 ribonucleoprotein complexes. (PubMed id 15303970)1, 9 Brendel C....Kindler S. (2004)
    10. A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 6175 HGNC: 10371 AceView: RPLP0 Ensembl:ENSG00000089157 euGenes: HUgn6175
    ECgene: RPLP0 Kegg: 6175 H-InvDB: RPLP0

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for RPLP0 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for RPLP0 gene:
    Search GeneIP for patents involving RPLP0

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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