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Aliases for RPL9P9 Gene

Aliases for RPL9P9 Gene

  • Ribosomal Protein L9 Pseudogene 9 2 5
  • RPL9 RPL9P7 RPL9P8 RPL9P9 4

External Ids for RPL9P9 Gene

Previous GeneCards Identifiers for RPL9P9 Gene

  • GC15U900487
  • GC15M080452
  • GC15M082671
  • GC15M082676
  • GC15M082679
  • GC15M082683
  • GC15M082685

Summaries for RPL9P9 Gene

GeneCards Summary for RPL9P9 Gene

RPL9P9 (Ribosomal Protein L9 Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL9P9 Gene

Genomics for RPL9P9 Gene

Regulatory Elements for RPL9P9 Gene

Enhancers for RPL9P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F083010 1.1 ENCODE 24.9 -638.5 -638548 2.8 CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 DEK C15orf40 FAM103A1 SNHG21 RPL9P9 CPEB1 CPEB1-AS1 EFL1 AP3B2 WHAMM ENSG00000260579
GH15F081722 0.5 ENCODE 4.4 +649.3 649343 1.9 ZNF316 EMSY MAFK RPL9P9 GC15P081695 GC15P081697 GC15P081751
GH15F082362 0.5 Ensembl 0.4 +9.9 9934 0.8 ZNF146 ZNF280D ZNF580 KDM1A RPL9P9 UBE2Q2P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL9P9 on UCSC Golden Path with GeneCards custom track

Promoters for RPL9P9 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001797496 111 799

Genomic Location for RPL9P9 Gene

Chromosome:
15
Start:
82,372,196 bp from pter
End:
82,372,912 bp from pter
Size:
717 bases
Orientation:
Minus strand

Genomic View for RPL9P9 Gene

Genes around RPL9P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for RPL9P9 Gene

Proteins for RPL9P9 Gene

  • Protein details for RPL9P9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P32969-RL9_HUMAN
    Recommended name:
    60S ribosomal protein L9
    Protein Accession:
    P32969

    Protein attributes for RPL9P9 Gene

    Size:
    192 amino acids
    Molecular mass:
    21863 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for RPL9P9 Gene

neXtProt entry for RPL9P9 Gene

Post-translational modifications for RPL9P9 Gene

  • Ubiquitination at Lys 2, Lys 21, Lys 174, and Lys 184
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for RPL9P9 Gene

Domains & Families for RPL9P9 Gene

Protein Domains for RPL9P9 Gene

Suggested Antigen Peptide Sequences for RPL9P9 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P32969

UniProtKB/Swiss-Prot:

RL9_HUMAN :
  • Belongs to the ribosomal protein L6P family.
Family:
  • Belongs to the ribosomal protein L6P family.
genes like me logo Genes that share domains with RPL9P9: view

No data available for Gene Families for RPL9P9 Gene

Function for RPL9P9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P9 Gene

Localization for RPL9P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL9P9 Gene

Transcripts for RPL9P9 Gene

mRNA/cDNA for RPL9P9 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P9 Gene

No ASD Table

Relevant External Links for RPL9P9 Gene

GeneLoc Exon Structure for
RPL9P9
ECgene alternative splicing isoforms for
RPL9P9

Expression for RPL9P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL9P9 Gene

Protein differential expression in normal tissues from HIPED for RPL9P9 Gene

This gene is overexpressed in Tlymphocyte (11.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for RPL9P9 Gene



Protein tissue co-expression partners for RPL9P9 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of RPL9P9 Gene:

RPL9P9
genes like me logo Genes that share expression patterns with RPL9P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RPL9P9 Gene

Orthologs for RPL9P9 Gene

Evolution for RPL9P9 Gene

ENSEMBL:
Gene Tree for RPL9P9 (if available)
TreeFam:
Gene Tree for RPL9P9 (if available)

No data available for Orthologs for RPL9P9 Gene

Paralogs for RPL9P9 Gene

(1) SIMAP similar genes for RPL9P9 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RPL9P9: view

No data available for Paralogs for RPL9P9 Gene

Variants for RPL9P9 Gene

Relevant External Links for RPL9P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P9 Gene

Disorders for RPL9P9 Gene

No disorders were found for RPL9P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL9P9 Gene

Publications for RPL9P9 Gene

  1. N-terminome analysis of the human mitochondrial proteome. (PMID: 25944712) Vaca Jacome A.S. … Carapito C. (Proteomics 2015) 4 64
  2. An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. (PMID: 24275569) Bian Y. … Zou H. (J. Proteomics 2014) 4 64
  3. Structures of the human and Drosophila 80S ribosome. (PMID: 23636399) Anger A.M. … Beckmann R. (Nature 2013) 4 64
  4. N-terminal acetylome analyses and functional insights of the N- terminal acetyltransferase NatB. (PMID: 22814378) Van Damme P. … Aldabe R. (Proc. Natl. Acad. Sci. U.S.A. 2012) 4 64
  5. Initial characterization of the human central proteome. (PMID: 21269460) Burkard T.R. … Colinge J. (BMC Syst. Biol. 2011) 4 64

Products for RPL9P9 Gene

Sources for RPL9P9 Gene

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