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Aliases for RPL9P9 Gene

Aliases for RPL9P9 Gene

  • Ribosomal Protein L9 Pseudogene 9 2 5
  • Large Ribosomal Subunit Protein UL6 4
  • RPL9 RPL9P7 RPL9P8 RPL9P9 4

External Ids for RPL9P9 Gene

Previous GeneCards Identifiers for RPL9P9 Gene

  • GC15U900487
  • GC15M080452
  • GC15M082671
  • GC15M082676
  • GC15M082679
  • GC15M082683
  • GC15M082685

Summaries for RPL9P9 Gene

GeneCards Summary for RPL9P9 Gene

RPL9P9 (Ribosomal Protein L9 Pseudogene 9) is a Pseudogene.

Additional gene information for RPL9P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL9P9 Gene

Genomics for RPL9P9 Gene

GeneHancer (GH) Regulatory Elements for RPL9P9 Gene

Promoters and enhancers for RPL9P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I082372 Promoter 0.5 Ensembl 550.8 +0.1 111 0.4 GC15M082374 RPL9P8 RPL9P9 UBE2Q2P2
GH15I082373 Enhancer 0.2 Ensembl 550.8 -0.9 -889 0.4 GC15M082374 RPL9P8 RPL9P9 GC15P082378 UBE2Q2P2
GH15I083204 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 21.5 -833.9 -833886 4.3 HDGF SIN3A GLI4 ZNF2 ZBTB7B GTF3C2 GLIS2 ZNF213 KLF7 RUNX3 HDGFL3 C15orf40 WHAMM RPL9P9 GOLGA6L9 FAM103A1 CSPG4P11 BTBD1 FABP5P8 AP3B2
GH15I082708 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.9 -336.4 -336419 2 ZNF133 ARID4B SIN3A ZNF48 ZNF766 GLIS2 ZNF213 ELK1 ZNF143 KLF7 AP3B2 SAXO2 C15orf40 WHAMM SNHG21 RPL9P9 CPEB1 HDGFL3 EFL1 PIR57194
GH15I083010 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 9.9 -638.5 -638548 2.8 HDGF CLOCK ARNT ZFP64 ARID4B NEUROD1 SIN3A DMAP1 ZNF2 ZBTB7B C15orf40 GC15M083024 PIR34182 ENSG00000260608 FAM103A1 WHAMM ENSG00000260579 HOMER2 BTBD1 CPEB1-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL9P9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL9P9 Gene

Genomic Locations for RPL9P9 Gene
chr15:82,372,196-82,372,912
(GRCh38/hg38)
Size:
717 bases
Orientation:
Minus strand
chr15:82,664,415-82,665,118
(GRCh37/hg19)

Genomic View for RPL9P9 Gene

Genes around RPL9P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for RPL9P9 Gene

Proteins for RPL9P9 Gene

  • Protein details for RPL9P9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P32969-RL9_HUMAN
    Recommended name:
    60S ribosomal protein L9
    Protein Accession:
    P32969

    Protein attributes for RPL9P9 Gene

    Size:
    192 amino acids
    Molecular mass:
    21863 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for RPL9P9 Gene

neXtProt entry for RPL9P9 Gene

Post-translational modifications for RPL9P9 Gene

  • Ubiquitination at Lys2, Lys21, isoforms=174, and isoforms=184

No data available for DME Specific Peptides for RPL9P9 Gene

Domains & Families for RPL9P9 Gene

Suggested Antigen Peptide Sequences for RPL9P9 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P32969

UniProtKB/Swiss-Prot:

RL9_HUMAN :
  • Belongs to the universal ribosomal protein uL6 family.
Family:
  • Belongs to the universal ribosomal protein uL6 family.
genes like me logo Genes that share domains with RPL9P9: view

No data available for Gene Families for RPL9P9 Gene

Function for RPL9P9 Gene

Phenotypes From GWAS Catalog for RPL9P9 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P9 Gene

Localization for RPL9P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL9P9 Gene

Drugs & Compounds for RPL9P9 Gene

No Compound Related Data Available

Transcripts for RPL9P9 Gene

mRNA/cDNA for RPL9P9 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P9 Gene

No ASD Table

Relevant External Links for RPL9P9 Gene

GeneLoc Exon Structure for
RPL9P9
ECgene alternative splicing isoforms for
RPL9P9

Expression for RPL9P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL9P9 Gene

Protein differential expression in normal tissues from HIPED for RPL9P9 Gene

This gene is overexpressed in Tlymphocyte (11.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for RPL9P9 Gene



Protein tissue co-expression partners for RPL9P9 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of RPL9P9 Gene:

RPL9P9
genes like me logo Genes that share expression patterns with RPL9P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P9 Gene

Orthologs for RPL9P9 Gene

Evolution for RPL9P9 Gene

ENSEMBL:
Gene Tree for RPL9P9 (if available)
TreeFam:
Gene Tree for RPL9P9 (if available)

No data available for Orthologs for RPL9P9 Gene

Paralogs for RPL9P9 Gene

(1) SIMAP similar genes for RPL9P9 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RPL9P9: view

No data available for Paralogs for RPL9P9 Gene

Variants for RPL9P9 Gene

Additional Variant Information for RPL9P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P9 Gene

Disorders for RPL9P9 Gene

No disorders were found for RPL9P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL9P9 Gene

Publications for RPL9P9 Gene

  1. N-terminome analysis of the human mitochondrial proteome. (PMID: 25944712) Vaca Jacome AS … Carapito C (Proteomics 2015) 4 58
  2. An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. (PMID: 24275569) Bian Y … Zou H (Journal of proteomics 2014) 4 58
  3. A new system for naming ribosomal proteins. (PMID: 24524803) Ban N … Yusupov M (Current opinion in structural biology 2014) 4 58
  4. Structures of the human and Drosophila 80S ribosome. (PMID: 23636399) Anger AM … Beckmann R (Nature 2013) 4 58
  5. N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB. (PMID: 22814378) Van Damme P … Aldabe R (Proceedings of the National Academy of Sciences of the United States of America 2012) 4 58

Products for RPL9P9 Gene

Sources for RPL9P9 Gene

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