Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL9P5 Gene

Aliases for RPL9P5 Gene

  • Ribosomal Protein L9 Pseudogene 5 2 3
  • RPL9_9_1374 3

External Ids for RPL9P5 Gene

Previous GeneCards Identifiers for RPL9P5 Gene

  • GC14U900559
  • GC14P058100
  • GC14P059031

Summaries for RPL9P5 Gene

GeneCards Summary for RPL9P5 Gene

RPL9P5 (Ribosomal Protein L9 Pseudogene 5) is a Pseudogene.

Additional gene information for RPL9P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL9P5 Gene

Genomics for RPL9P5 Gene

GeneHancer (GH) Regulatory Elements for RPL9P5 Gene

Promoters and enhancers for RPL9P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I058426 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 6.2 -136.1 -136113 3.6 HDGF PKNOX1 CLOCK SMAD1 FOXA2 ARNT ZFP64 ARID4B NEUROD1 SIN3A KIAA0586 TIMM9 GC14M058423 PSMA3-AS1 ENSG00000259969 ENSG00000258682 HMGB1P14 SLC35F4 ARID4A RPL31P4
GH14I058560 Enhancer 0.5 ENCODE 0.8 -3.5 -3492 0.8 IKZF1 ZNF24 PRDM1 GABPA DACT1 RPL9P5 GC14P058521
GH14I058532 Enhancer 1.1 UCNEbase Ensembl ENCODE 0.3 -29.7 -29747 2.7 SRF ZNF316 RCOR1 ELF1 EMSY DACT1 PSMA3-AS1 HNRNPCP1 GC14P058521 RPL9P5 KIAA0586
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL9P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL9P5 Gene

Genomic Locations for RPL9P5 Gene
chr14:58,564,058-58,564,738
(GRCh38/hg38)
Size:
681 bases
Orientation:
Plus strand
chr14:59,030,776-59,031,456
(GRCh37/hg19)

Genomic View for RPL9P5 Gene

Genes around RPL9P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL9P5 Gene

Proteins for RPL9P5 Gene

Post-translational modifications for RPL9P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL9P5 Gene

Domains & Families for RPL9P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL9P5 Gene

Function for RPL9P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P5 Gene

Localization for RPL9P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL9P5 Gene

Pathways & Interactions for RPL9P5 Gene

SuperPathways for RPL9P5 Gene

No Data Available

Interacting Proteins for RPL9P5 Gene

Gene Ontology (GO) - Biological Process for RPL9P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL9P5 Gene

Drugs & Compounds for RPL9P5 Gene

No Compound Related Data Available

Transcripts for RPL9P5 Gene

mRNA/cDNA for RPL9P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P5 Gene

No ASD Table

Relevant External Links for RPL9P5 Gene

GeneLoc Exon Structure for
RPL9P5
ECgene alternative splicing isoforms for
RPL9P5

Expression for RPL9P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL9P5 Gene

mRNA differential expression in normal tissues according to GTEx for RPL9P5 Gene

This gene is overexpressed in Pituitary (x5.2).

NURSA nuclear receptor signaling pathways regulating expression of RPL9P5 Gene:

RPL9P5
genes like me logo Genes that share expression patterns with RPL9P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P5 Gene

Orthologs for RPL9P5 Gene

Evolution for RPL9P5 Gene

ENSEMBL:
Gene Tree for RPL9P5 (if available)
TreeFam:
Gene Tree for RPL9P5 (if available)

No data available for Orthologs for RPL9P5 Gene

Paralogs for RPL9P5 Gene

No data available for Paralogs for RPL9P5 Gene

Variants for RPL9P5 Gene

Additional Variant Information for RPL9P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P5 Gene

Disorders for RPL9P5 Gene

Additional Disease Information for RPL9P5

Genetic Association Database
(GAD)

No disorders were found for RPL9P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL9P5 Gene

Publications for RPL9P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide association study of sporadic ALS in a homogenous Irish population. (PMID: 18057069) Cronin S … Hardiman O (Human molecular genetics 2008) 44 58

Products for RPL9P5 Gene

Sources for RPL9P5 Gene

Content
Loading form....