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Aliases for RPL9P30 Gene

Aliases for RPL9P30 Gene

  • Ribosomal Protein L9 Pseudogene 30 2 3
  • RPL9_11_1536 3

External Ids for RPL9P30 Gene

Previous GeneCards Identifiers for RPL9P30 Gene

  • GC17P025207
  • GC17P028183

Summaries for RPL9P30 Gene

GeneCards Summary for RPL9P30 Gene

RPL9P30 (Ribosomal Protein L9 Pseudogene 30) is a Pseudogene.

Additional gene information for RPL9P30 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL9P30 Gene

Genomics for RPL9P30 Gene

GeneHancer (GH) Regulatory Elements for RPL9P30 Gene

Promoters and enhancers for RPL9P30 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I029853 Enhancer 0.5 ENCODE 550.8 -1.2 -1243 1.2 ATF4 JUND PRDM6 SCRT2 CEBPB CEBPG FOS GC17P029856 RPL9P30 ENSG00000239129 ENSG00000252657 SSH2
GH17I029849 Enhancer 0.9 Ensembl ENCODE 0.4 -5.6 -5642 1.8 JUN BATF FOSL2 FOS ATF7 IKZF2 SRF ZNF189 JUNB DPF2 CORO6 ENSG00000239129 EFCAB5 SSH2 RPL9P30 ENSG00000252657
GH17I029835 Enhancer 0.9 Ensembl ENCODE 0.4 -19.3 -19348 2 MEIS2 PKNOX1 BACH1 CEBPG GATA3 ZNF316 NFE2 MAFK SOX6 CEBPB CORO6 ENSG00000239129 SSH2 EFCAB5 RPL9P30 ENSG00000252657
GH17I029844 Enhancer 0.7 ENCODE 0.4 -11.0 -11018 0.8 NFIB ZNF335 ZFHX2 ZSCAN5C SCRT2 ZBTB20 EGR2 ZNF189 GFI1B ZBTB8A ENSG00000239129 EFCAB5 SSH2 RNU6-920P RPL9P30 ENSG00000252657
GH17I029839 Enhancer 0.6 ENCODE 0.4 -16.6 -16617 0.2 RFX1 BMI1 ZBTB48 RFX3 MYNN ZNF629 ZNF600 ZBTB17 EFCAB5 SSH2 ENSG00000239129 RPL9P30 ENSG00000252657
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL9P30 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL9P30 Gene

Genomic Locations for RPL9P30 Gene
chr17:29,855,735-29,856,420
(GRCh38/hg38)
Size:
686 bases
Orientation:
Plus strand
chr17:28,182,753-28,183,438
(GRCh37/hg19)

Genomic View for RPL9P30 Gene

Genes around RPL9P30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL9P30 Gene

Proteins for RPL9P30 Gene

Post-translational modifications for RPL9P30 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL9P30 Gene

Domains & Families for RPL9P30 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL9P30 Gene

Function for RPL9P30 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P30 Gene

Localization for RPL9P30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL9P30 Gene

Pathways & Interactions for RPL9P30 Gene

SuperPathways for RPL9P30 Gene

No Data Available

Interacting Proteins for RPL9P30 Gene

Gene Ontology (GO) - Biological Process for RPL9P30 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL9P30 Gene

Drugs & Compounds for RPL9P30 Gene

No Compound Related Data Available

Transcripts for RPL9P30 Gene

mRNA/cDNA for RPL9P30 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P30 Gene

No ASD Table

Relevant External Links for RPL9P30 Gene

GeneLoc Exon Structure for
RPL9P30
ECgene alternative splicing isoforms for
RPL9P30

Expression for RPL9P30 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL9P30 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL9P30 Gene:

RPL9P30
genes like me logo Genes that share expression patterns with RPL9P30: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P30 Gene

Orthologs for RPL9P30 Gene

Evolution for RPL9P30 Gene

ENSEMBL:
Gene Tree for RPL9P30 (if available)
TreeFam:
Gene Tree for RPL9P30 (if available)

No data available for Orthologs for RPL9P30 Gene

Paralogs for RPL9P30 Gene

No data available for Paralogs for RPL9P30 Gene

Variants for RPL9P30 Gene

Additional Variant Information for RPL9P30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P30 Gene

Disorders for RPL9P30 Gene

No disorders were found for RPL9P30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL9P30 Gene

Publications for RPL9P30 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL9P30 Gene

Sources for RPL9P30 Gene

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