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Aliases for RPL9P27 Gene

Aliases for RPL9P27 Gene

  • Ribosomal Protein L9 Pseudogene 27 2 3
  • RPL9_12_1427 3
  • AC013356.1 5

External Ids for RPL9P27 Gene

Previous GeneCards Identifiers for RPL9P27 Gene

  • GC15M038564
  • GC15M040773

Summaries for RPL9P27 Gene

GeneCards Summary for RPL9P27 Gene

RPL9P27 (Ribosomal Protein L9 Pseudogene 27) is a Pseudogene.

Additional gene information for RPL9P27 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL9P27 Gene

Genomics for RPL9P27 Gene

GeneHancer (GH) Regulatory Elements for RPL9P27 Gene

Promoters and enhancers for RPL9P27 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I040435 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 11.8 +42.3 42334 7.8 PKNOX1 ARID4B SIN3A FEZF1 ZNF48 POLR2B GLIS2 FOS SP3 SP5 BAHD1 KNSTRN DISP2 IVD CCDC32 CHST14 RPL9P27 PHGR1 CCDC9B RNA5SP392
GH15I040326 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 10.3 +140.3 140286 28.7 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 DMAP1 SLC30A9 ZNF766 CBX5 CCDC9B PHGR1 KNSTRN DISP2 IVD ANKRD63 RPLP0P10 PLCB2 C15orf56 PAK6
GH15I040420 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.1 +60.0 60040 2.3 RB1 NFIB ARID4B ZNF48 RAD21 ZNF335 ZNF121 GLIS2 ARID2 ZSCAN5C GC15P040422 PIR57787 KNSTRN IVD DISP2 PHGR1 CCDC9B RNA5SP392 ANKRD63 RPLP0P10
GH15I040549 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.7 -69.3 -69289 2.3 FOXA2 PKNOX1 RB1 BMI1 BATF IRF4 ATF7 ETV6 BCLAF1 IKZF2 CCDC32 RPL9P27 CHST14 PIR54978 ENSG00000259536
GH15I040742 Enhancer 1.2 Ensembl ENCODE 9.9 -264.6 -264574 7.4 ATF1 PKNOX1 FOXA2 ARID4B SIN3A IRF4 TCF12 ZNF121 ZNF766 ELK1 CCDC32 RAD51 C15orf62 DNAJC17 ZFYVE19 RAD51-AS1 SPINT1 RHOV VPS18 ENSG00000251161
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL9P27 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL9P27 Gene

Genomic Locations for RPL9P27 Gene
chr15:40,480,651-40,481,350
(GRCh38/hg38)
Size:
700 bases
Orientation:
Minus strand
chr15:40,772,850-40,773,549
(GRCh37/hg19)

Genomic View for RPL9P27 Gene

Genes around RPL9P27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL9P27 Gene

Proteins for RPL9P27 Gene

Post-translational modifications for RPL9P27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL9P27 Gene

Domains & Families for RPL9P27 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL9P27 Gene

Function for RPL9P27 Gene

Phenotypes From GWAS Catalog for RPL9P27 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P27 Gene

Localization for RPL9P27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL9P27 Gene

Pathways & Interactions for RPL9P27 Gene

SuperPathways for RPL9P27 Gene

No Data Available

Interacting Proteins for RPL9P27 Gene

Gene Ontology (GO) - Biological Process for RPL9P27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL9P27 Gene

Drugs & Compounds for RPL9P27 Gene

No Compound Related Data Available

Transcripts for RPL9P27 Gene

mRNA/cDNA for RPL9P27 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P27 Gene

No ASD Table

Relevant External Links for RPL9P27 Gene

GeneLoc Exon Structure for
RPL9P27
ECgene alternative splicing isoforms for
RPL9P27

Expression for RPL9P27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL9P27 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL9P27 Gene:

RPL9P27
genes like me logo Genes that share expression patterns with RPL9P27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P27 Gene

Orthologs for RPL9P27 Gene

Evolution for RPL9P27 Gene

ENSEMBL:
Gene Tree for RPL9P27 (if available)
TreeFam:
Gene Tree for RPL9P27 (if available)

No data available for Orthologs for RPL9P27 Gene

Paralogs for RPL9P27 Gene

No data available for Paralogs for RPL9P27 Gene

Variants for RPL9P27 Gene

Additional Variant Information for RPL9P27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P27 Gene

Disorders for RPL9P27 Gene

No disorders were found for RPL9P27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL9P27 Gene

Publications for RPL9P27 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL9P27 Gene

Sources for RPL9P27 Gene

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