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RPL9P24 Gene(Pseudogene)

Ribosomal Protein L9 Pseudogene 24

GCID:
GC12P101936
GIFtS:
15
Genes Participants
UDN Logo

Aliases for RPL9P24 Gene

Subcategory (RNA class) for RPL9P24 Gene

lncRNA

Aliases for RPL9P24 Gene

  • Ribosomal Protein L9 Pseudogene 24 2 3
  • RP11-512N21.1 5
  • RPL9_7_1272 3

External Ids for RPL9P24 Gene

ORGUL Members for RPL9P24 Gene

Previous GeneCards Identifiers for RPL9P24 Gene

  • GC12U901056
  • GC12P102330

Summaries for RPL9P24 Gene

GeneCards Summary for RPL9P24 Gene

RPL9P24 (Ribosomal Protein L9 Pseudogene 24) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL9P24 Gene

Genomics for RPL9P24 Gene

Products:

  1. Regulatory Element

Regulatory Elements for RPL9P24 Gene

Enhancers for RPL9P24 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G101929 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -1.0 -1048 10.5 HDGF PKNOX1 ATF1 WRNIP1 FEZF1 GLIS2 GATA2 ZNF143 ZNF207 FOS GNPTAB WASHC3 IGF1 RNA5SP369 RNU6-101P SYCP3 DRAM1 CHPT1 RPL9P24 GC12P101929
GH12G101941 1 ENCODE dbSUPER 0.4 +5.6 5561 1.1 CBX3 WRNIP1 CEBPG BMI1 TRIM24 FOS IKZF2 CHD2 MTA2 NR2F1 IGF1 RPL9P24 ENSG00000258308
GH12G101942 0.5 ENCODE dbSUPER 0.4 +6.2 6242 0.2 IGF1 GNPTAB RPL9P24 ENSG00000258308
GH12G101945 0.5 ENCODE 0.4 +9.4 9422 0.5 E2F1 FOXA2 MNT FOXP2 FOXA1 DRAM1 RPL9P24 ENSG00000258308
GH12G101946 0.4 ENCODE 0.4 +9.9 9882 0.2 FOXA2 MNT RPL9P24 ENSG00000258308
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL9P24 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL9P24 Gene

Chromosome:
12
Start:
101,936,216 bp from pter
End:
101,936,674 bp from pter
Size:
459 bases
Orientation:
Plus strand

Genomic View for RPL9P24 Gene

Genes around RPL9P24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P24 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL9P24 Gene

Proteins for RPL9P24 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL9P24 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL9P24 Gene

Domains & Families for RPL9P24 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL9P24 Gene

Function for RPL9P24 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P24 Gene

Localization for RPL9P24 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL9P24 Gene

Pathways & Interactions for RPL9P24 Gene

SuperPathways for RPL9P24 Gene

PathCards logo More details on SuperPathways for RPL9P24
No Data Available

Interacting Proteins for RPL9P24 Gene

Gene Ontology (GO) - Biological Process for RPL9P24 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL9P24 Gene

Drugs & Compounds for RPL9P24 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL9P24 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for RPL9P24 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P24 Gene

No ASD Table

Relevant External Links for RPL9P24 Gene

GeneLoc Exon Structure for
RPL9P24
ECgene alternative splicing isoforms for
RPL9P24

Expression for RPL9P24 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL9P24 Gene

mRNA expression in normal human tissues for RPL9P24 Gene
mRNA expression by GTEx for RPL9P24 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL9P24 Gene:

RPL9P24
genes like me logo Genes that share expression patterns with RPL9P24: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P24 Gene

Orthologs for RPL9P24 Gene

Evolution for RPL9P24 Gene

ENSEMBL:
Gene Tree for RPL9P24 (if available)
TreeFam:
Gene Tree for RPL9P24 (if available)

No data available for Orthologs for RPL9P24 Gene

Paralogs for RPL9P24 Gene

No data available for Paralogs for RPL9P24 Gene

Variants for RPL9P24 Gene

Relevant External Links for RPL9P24 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P24

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P24 Gene

Disorders for RPL9P24 Gene

Relevant External Links for RPL9P24

Genetic Association Database (GAD)
RPL9P24

No disorders were found for RPL9P24 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL9P24 Gene

Publications for RPL9P24 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H. … Hirschhorn J.N. (Nature 2010) 46 64
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64

Products for RPL9P24 Gene

Sources for RPL9P24 Gene

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