Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL9P21 Gene

Aliases for RPL9P21 Gene

  • Ribosomal Protein L9 Pseudogene 21 2 3 5
  • RPL9_8_1037 3

External Ids for RPL9P21 Gene

Previous GeneCards Identifiers for RPL9P21 Gene

  • GC10M044231
  • GC10M044909

Summaries for RPL9P21 Gene

GeneCards Summary for RPL9P21 Gene

RPL9P21 (Ribosomal Protein L9 Pseudogene 21) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL9P21 Gene

Genomics for RPL9P21 Gene

Regulatory Elements for RPL9P21 Gene

Enhancers for RPL9P21 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G044415 0.8 ENCODE 0.7 -1.5 -1523 1.6 SOX13 ESRRA MAX RAD21 KMT2B ZNF48 TEAD3 RARA RERE SOX5 CXCL12 RPL9P21 ENSG00000270767
GH10G044438 0.8 Ensembl ENCODE 0.3 -23.5 -23461 0.8 MAFF ZNF316 MAFG EMSY MAFK NR2F2 CXCL12 TMEM72-AS1 RPL9P21 ENSG00000270767
GH10G044479 1 ENCODE 0.2 -64.0 -63990 1.6 HDGF ATF1 SIN3A ZNF48 YY1 TCF12 GATA2 ELK1 ZNF143 PAF1 CXCL12 ENSG00000270767 RPL9P21
GH10G044458 0.6 ENCODE 0.3 -44.6 -44576 1.8 ZNF366 SMARCA4 ZNF512 BCL6B CEBPB CEBPG ATF2 CXCL12 ENSG00000270767 RPL9P21
GH10G044478 0.9 FANTOM5 0.2 -63.0 -63006 0.1 PKNOX1 NFRKB BMI1 TCF12 GATA2 SCRT2 RELB IKZF2 CBFB ZBTB11 CXCL12 ENSG00000270767 RPL9P21
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL9P21 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL9P21 Gene

Chromosome:
10
Start:
44,414,415 bp from pter
End:
44,415,202 bp from pter
Size:
788 bases
Orientation:
Minus strand

Genomic View for RPL9P21 Gene

Genes around RPL9P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL9P21 Gene

Proteins for RPL9P21 Gene

Post-translational modifications for RPL9P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL9P21 Gene

Domains & Families for RPL9P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL9P21 Gene

Function for RPL9P21 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P21 Gene

Localization for RPL9P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL9P21 Gene

Pathways & Interactions for RPL9P21 Gene

SuperPathways for RPL9P21 Gene

No Data Available

Interacting Proteins for RPL9P21 Gene

Gene Ontology (GO) - Biological Process for RPL9P21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL9P21 Gene

Drugs & Compounds for RPL9P21 Gene

No Compound Related Data Available

Transcripts for RPL9P21 Gene

mRNA/cDNA for RPL9P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P21 Gene

No ASD Table

Relevant External Links for RPL9P21 Gene

GeneLoc Exon Structure for
RPL9P21
ECgene alternative splicing isoforms for
RPL9P21

Expression for RPL9P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL9P21 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL9P21 Gene:

RPL9P21
genes like me logo Genes that share expression patterns with RPL9P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P21 Gene

Orthologs for RPL9P21 Gene

Evolution for RPL9P21 Gene

ENSEMBL:
Gene Tree for RPL9P21 (if available)
TreeFam:
Gene Tree for RPL9P21 (if available)

No data available for Orthologs for RPL9P21 Gene

Paralogs for RPL9P21 Gene

No data available for Paralogs for RPL9P21 Gene

Variants for RPL9P21 Gene

Relevant External Links for RPL9P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P21 Gene

Disorders for RPL9P21 Gene

Relevant External Links for RPL9P21

Genetic Association Database (GAD)
RPL9P21

No disorders were found for RPL9P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL9P21 Gene

Publications for RPL9P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study identifies BICD1 as a susceptibility gene for emphysema. (PMID: 20709820) Kong X. … Pillai S.G. (Am. J. Respir. Crit. Care Med. 2011) 46 64
  3. A genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder. (PMID: 20889312) Wang K.S. … Aragam N. (Schizophr. Res. 2010) 46 64
  4. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64
  5. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64

Products for RPL9P21 Gene

Sources for RPL9P21 Gene

Content
Loading form....