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Aliases for RPL9P16 Gene

Aliases for RPL9P16 Gene

  • Ribosomal Protein L9 Pseudogene 16 2 3 5
  • RPL9_3_534 3

External Ids for RPL9P16 Gene

Previous GeneCards Identifiers for RPL9P16 Gene

  • GC04P169914
  • GC04P169677
  • GC04P165429

Summaries for RPL9P16 Gene

GeneCards Summary for RPL9P16 Gene

RPL9P16 (Ribosomal Protein L9 Pseudogene 16) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL9P16 Gene

Genomics for RPL9P16 Gene

Regulatory Elements for RPL9P16 Gene

Enhancers for RPL9P16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F168755 1 Ensembl ENCODE 0.8 +2.6 2592 6.2 PKNOX1 KLF1 BHLHE40 HLF CEBPB CEBPG ZBTB40 JUND SCRT2 CEBPA RPL9P16 GC04P168775
GH04F168741 1.2 FANTOM5 Ensembl ENCODE 0.4 -14.0 -13998 0.8 GATA3 PKNOX1 IKZF1 MLLT1 KLF4 SPI1 RNU6-1336P DDX60L PALLD DDX60 RPL9P16
GH04F168742 1.1 Ensembl ENCODE 0.4 -12.0 -12028 1.7 HDAC1 PKNOX1 ARNT CREB3L1 ZNF2 CHAMP1 TFDP1 ZNF589 SMARCA4 KLF16 RNU6-1336P PALLD RPL9P16
GH04F168734 1.3 Ensembl ENCODE 0.3 -18.9 -18904 4.2 ATF1 ARNT SIN3A ARID4B ZNF2 YY1 ZNF766 GATA2 FOS JUNB PALLD RNU6-1336P ENSG00000249609 ENSG00000249623 RPL9P16
GH04F168764 0.9 Ensembl ENCODE 0.4 +10.7 10673 3.3 JUN CEBPB EP300 NR2F2 RFX5 JUND STAT3 FOS RCOR1 PALLD GC04P168775 RPL9P16
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL9P16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL9P16 Gene

Chromosome:
4
Start:
168,755,798 bp from pter
End:
168,756,481 bp from pter
Size:
684 bases
Orientation:
Plus strand

Genomic View for RPL9P16 Gene

Genes around RPL9P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL9P16 Gene

Proteins for RPL9P16 Gene

Post-translational modifications for RPL9P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL9P16 Gene

Domains & Families for RPL9P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL9P16 Gene

Function for RPL9P16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P16 Gene

Localization for RPL9P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL9P16 Gene

Pathways & Interactions for RPL9P16 Gene

SuperPathways for RPL9P16 Gene

No Data Available

Interacting Proteins for RPL9P16 Gene

Gene Ontology (GO) - Biological Process for RPL9P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL9P16 Gene

Transcripts for RPL9P16 Gene

mRNA/cDNA for RPL9P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P16 Gene

No ASD Table

Relevant External Links for RPL9P16 Gene

GeneLoc Exon Structure for
RPL9P16
ECgene alternative splicing isoforms for
RPL9P16

Expression for RPL9P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL9P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL9P16 Gene:

RPL9P16
genes like me logo Genes that share expression patterns with RPL9P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL9P16 Gene

Orthologs for RPL9P16 Gene

Evolution for RPL9P16 Gene

ENSEMBL:
Gene Tree for RPL9P16 (if available)
TreeFam:
Gene Tree for RPL9P16 (if available)

No data available for Orthologs for RPL9P16 Gene

Paralogs for RPL9P16 Gene

No data available for Paralogs for RPL9P16 Gene

Variants for RPL9P16 Gene

Relevant External Links for RPL9P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P16 Gene

Disorders for RPL9P16 Gene

Relevant External Links for RPL9P16

Genetic Association Database (GAD)
RPL9P16

No disorders were found for RPL9P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL9P16 Gene

Publications for RPL9P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL9P16 Gene

Sources for RPL9P16 Gene

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