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Aliases for RPL8P5 Gene

Subcategory (RNA class) for RPL8P5 Gene

antisense

Aliases for RPL8P5 Gene

  • Ribosomal Protein L8 Pseudogene 5 2 3
  • RPL8_2_1740 3
  • AC000078.5 5

External Ids for RPL8P5 Gene

ORGUL Members for RPL8P5 Gene

Previous GeneCards Identifiers for RPL8P5 Gene

  • GC22U900509

Summaries for RPL8P5 Gene

GeneCards Summary for RPL8P5 Gene

RPL8P5 (Ribosomal Protein L8 Pseudogene 5) is a Pseudogene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for RPL8P5 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for RPL8P5

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RPL8P5 Gene

Genomics for RPL8P5 Gene

Regulatory Elements for RPL8P5 Gene

Enhancers for RPL8P5 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RPL8P5 on UCSC Golden Path with GeneCards custom track

Promoters for RPL8P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RPL8P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL8P5 Gene

Chromosome:
22
Start:
19,887,289 bp from pter
End:
19,887,970 bp from pter
Size:
682 bases
Orientation:
Plus strand

Genomic View for RPL8P5 Gene

Genes around RPL8P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL8P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL8P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL8P5 Gene

ORGUL Member Location for RPL8P5 Gene

ORGUL Member Location for RPL8P5 gene

Proteins for RPL8P5 Gene

Post-translational modifications for RPL8P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL8P5 Gene

Domains & Families for RPL8P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL8P5 Gene

Function for RPL8P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL8P5 Gene

Localization for RPL8P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL8P5 Gene

Pathways & Interactions for RPL8P5 Gene

SuperPathways for RPL8P5 Gene

No Data Available

Interacting Proteins for RPL8P5 Gene

Gene Ontology (GO) - Biological Process for RPL8P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL8P5 Gene

Drugs & Compounds for RPL8P5 Gene

No Compound Related Data Available

Transcripts for RPL8P5 Gene

fRNAdb Secondary structures for RPL8P5 Gene

  • FR359900

mRNA/cDNA for RPL8P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL8P5 Gene

No ASD Table

Relevant External Links for RPL8P5 Gene

GeneLoc Exon Structure for
RPL8P5
ECgene alternative splicing isoforms for
RPL8P5

Expression for RPL8P5 Gene

mRNA expression in normal human tissues for RPL8P5 Gene

mRNA differential expression in normal tissues according to GTEx for RPL8P5 Gene

This gene is overexpressed in Muscle - Skeletal (x4.6) and Brain - Cerebellum (x4.4).
genes like me logo Genes that share expression patterns with RPL8P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RPL8P5 Gene

Orthologs for RPL8P5 Gene

Evolution for RPL8P5 Gene

ENSEMBL:
Gene Tree for RPL8P5 (if available)
TreeFam:
Gene Tree for RPL8P5 (if available)

No data available for Orthologs for RPL8P5 Gene

Paralogs for RPL8P5 Gene

No data available for Paralogs for RPL8P5 Gene

Variants for RPL8P5 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for RPL8P5 Gene

Disorders for RPL8P5 Gene

No disorders were found for RPL8P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL8P5 Gene

Publications for RPL8P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 67
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for RPL8P5 Gene

Sources for RPL8P5 Gene

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