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Aliases for RPL8P3 Gene

Aliases for RPL8P3 Gene

  • Ribosomal Protein L8 Pseudogene 3 2 3
  • RP11-372E1.1 5
  • RPL8_1_413 3

External Ids for RPL8P3 Gene

Previous GeneCards Identifiers for RPL8P3 Gene

  • GC03U901234
  • GC03M142546

Summaries for RPL8P3 Gene

GeneCards Summary for RPL8P3 Gene

RPL8P3 (Ribosomal Protein L8 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL8P3 Gene

Genomics for RPL8P3 Gene

Regulatory Elements for RPL8P3 Gene

Enhancers for RPL8P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G142828 0.9 ENCODE 0.7 -1.2 -1156 0.2 ATF1 RB1 ARID4B ZNF48 RAD21 RFX5 SCRT2 ZNF143 CREM MIXL1 PCOLCE2 LOC100507389 U2SURP RPL8P3
GH03G142849 1.5 Ensembl ENCODE dbSUPER 0.3 -22.9 -22897 2.0 PKNOX1 FOXA2 ATF1 ARNT AGO1 ARID4B TCF12 SP5 KAT8 MEF2D PBX2P1 XRN1 PCOLCE2 LOC100507389 RPL8P3
GH03G142862 1.2 Ensembl ENCODE dbSUPER 0.3 -35.9 -35858 1.9 TBP SMARCC1 MAX CEBPB ZBTB8A SMARCA4 POLR2A CEBPA ZSCAN5C SMC3 PCOLCE2 LOC100507389 PLS1 RNA5SP143 RPL8P3
GH03G142808 0.8 ENCODE 0.4 +19.4 19415 0.2 JUN ZNF175 CEBPG FOSL1 ZNF121 GATA2 TRIM24 RELB FOS SMARCE1 LOC100507389 PCOLCE2 RNA5SP143 PLS1 GC03P142802 RPL8P3
GH03G142853 0.9 Ensembl dbSUPER 0.3 -25.6 -25574 0.2 FOXA2 SAP130 NFIA JUN ZFHX2 JUND TCF7 ZBTB33 NR2F6 PRDM10 PCOLCE2 RPL8P3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL8P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL8P3 Gene

Chromosome:
3
Start:
142,827,054 bp from pter
End:
142,827,728 bp from pter
Size:
675 bases
Orientation:
Minus strand

Genomic View for RPL8P3 Gene

Genes around RPL8P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL8P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL8P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL8P3 Gene

Proteins for RPL8P3 Gene

Post-translational modifications for RPL8P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL8P3 Gene

Domains & Families for RPL8P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL8P3 Gene

Function for RPL8P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL8P3 Gene

Localization for RPL8P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL8P3 Gene

Pathways & Interactions for RPL8P3 Gene

SuperPathways for RPL8P3 Gene

No Data Available

Interacting Proteins for RPL8P3 Gene

Gene Ontology (GO) - Biological Process for RPL8P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL8P3 Gene

Drugs & Compounds for RPL8P3 Gene

No Compound Related Data Available

Transcripts for RPL8P3 Gene

mRNA/cDNA for RPL8P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL8P3 Gene

No ASD Table

Relevant External Links for RPL8P3 Gene

GeneLoc Exon Structure for
RPL8P3
ECgene alternative splicing isoforms for
RPL8P3

Expression for RPL8P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL8P3 Gene

mRNA differential expression in normal tissues according to GTEx for RPL8P3 Gene

This gene is overexpressed in Adipose - Subcutaneous (x6.4), Heart - Atrial Appendage (x4.6), and Pituitary (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of RPL8P3 Gene:

RPL8P3
genes like me logo Genes that share expression patterns with RPL8P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL8P3 Gene

Orthologs for RPL8P3 Gene

Evolution for RPL8P3 Gene

ENSEMBL:
Gene Tree for RPL8P3 (if available)
TreeFam:
Gene Tree for RPL8P3 (if available)

No data available for Orthologs for RPL8P3 Gene

Paralogs for RPL8P3 Gene

No data available for Paralogs for RPL8P3 Gene

Variants for RPL8P3 Gene

Relevant External Links for RPL8P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL8P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL8P3 Gene

Disorders for RPL8P3 Gene

Relevant External Links for RPL8P3

Genetic Association Database (GAD)
RPL8P3

No disorders were found for RPL8P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL8P3 Gene

Publications for RPL8P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations. (PMID: 22359512) Demirkan A. … Schmitz G. (PLoS Genet. 2012) 46 64

Products for RPL8P3 Gene

Sources for RPL8P3 Gene

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