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Aliases for RPL7P6 Gene

Aliases for RPL7P6 Gene

  • Ribosomal Protein L7 Pseudogene 6 2 3 5
  • RPL7_20_1216 3

External Ids for RPL7P6 Gene

Previous GeneCards Identifiers for RPL7P6 Gene

  • GC12P019097
  • GC12P019243

Summaries for RPL7P6 Gene

GeneCards Summary for RPL7P6 Gene

RPL7P6 (Ribosomal Protein L7 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7P6 Gene

Genomics for RPL7P6 Gene

Regulatory Elements for RPL7P6 Gene

Enhancers for RPL7P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G019065 1 ENCODE 0.3 -22.7 -22705 1.8 HNRNPUL1 FOXA2 ATF1 MLX ARID4B DMAP1 YY1 SP5 MXD4 NFYC RPL7P6 GC12M019039
GH12G019095 0.7 ENCODE 0.4 +7.3 7334 2.9 SOX5 SOX13 GATAD2A ZNF362 FOXA3 HLF CEBPB HMG20A FEZF1 ZNF384 PLEKHA5 RPL7P6 MEF2BNBP1
GH12G019058 0.5 Ensembl 0.3 -30.2 -30231 0.2 NFIA HNF4A RAD21 YY1 ZNF592 GC12M019039 RPL7P6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7P6 Gene

Chromosome:
12
Start:
19,089,131 bp from pter
End:
19,089,951 bp from pter
Size:
821 bases
Orientation:
Plus strand

Genomic View for RPL7P6 Gene

Genes around RPL7P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P6 Gene

Proteins for RPL7P6 Gene

Post-translational modifications for RPL7P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P6 Gene

Domains & Families for RPL7P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7P6 Gene

Function for RPL7P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P6 Gene

Localization for RPL7P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7P6 Gene

Pathways & Interactions for RPL7P6 Gene

SuperPathways for RPL7P6 Gene

No Data Available

Interacting Proteins for RPL7P6 Gene

Gene Ontology (GO) - Biological Process for RPL7P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7P6 Gene

Transcripts for RPL7P6 Gene

mRNA/cDNA for RPL7P6 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P6 Gene

No ASD Table

Relevant External Links for RPL7P6 Gene

GeneLoc Exon Structure for
RPL7P6
ECgene alternative splicing isoforms for
RPL7P6

Expression for RPL7P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7P6 Gene

Protein differential expression in normal tissues from HIPED for RPL7P6 Gene

This gene is overexpressed in Heart (31.2), Saliva (28.8), and Urine (9.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for RPL7P6 Gene



Protein tissue co-expression partners for RPL7P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7P6 Gene:

RPL7P6
genes like me logo Genes that share expression patterns with RPL7P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7P6 Gene

Orthologs for RPL7P6 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RPL7P6 Gene

Organism Taxonomy Gene Similarity Type Details
zebrafish
(Danio rerio)
Actinopterygii -- 34
Species where no ortholog for RPL7P6 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RPL7P6 Gene

ENSEMBL:
Gene Tree for RPL7P6 (if available)
TreeFam:
Gene Tree for RPL7P6 (if available)

Paralogs for RPL7P6 Gene

No data available for Paralogs for RPL7P6 Gene

Variants for RPL7P6 Gene

Relevant External Links for RPL7P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P6 Gene

Disorders for RPL7P6 Gene

No disorders were found for RPL7P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P6 Gene

Publications for RPL7P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7P6 Gene

Sources for RPL7P6 Gene

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