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Aliases for RPL7P42 Gene

Aliases for RPL7P42 Gene

  • Ribosomal Protein L7 Pseudogene 42 2 3 5
  • RPL7_22_1255 3

External Ids for RPL7P42 Gene

Previous GeneCards Identifiers for RPL7P42 Gene

  • GC12U901118
  • GC12P069079

Summaries for RPL7P42 Gene

GeneCards Summary for RPL7P42 Gene

RPL7P42 (Ribosomal Protein L7 Pseudogene 42) is a Pseudogene.

Additional gene information for RPL7P42 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7P42 Gene

Genomics for RPL7P42 Gene

Regulatory Elements for RPL7P42 Gene

Enhancers for RPL7P42 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H068803 1.7 FANTOM5 Ensembl ENCODE 14.7 +122.1 122107 7 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D SSRP1 NUP107 CPSF6 KRT8P39 RAP1B RPL10P12 C1GALT1P1 RPL7P42 ENSG00000258140 ENSG00000256273 MDM2
GH12H068361 2 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -319.3 -319257 7 HDGF FOXA2 PKNOX1 ARID4B SIN3A YY1 ZNF143 FOS SP3 ZC3H11A NUP107 MDM1 LINC02384 RPL10P12 SNORA70G CPSF6 KRT8P39 RPL7P42 LOC100507250 RAP1B
GH12H068358 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -325.1 -325051 2 HDAC1 PKNOX1 ATF1 TBL1XR1 RB1 FEZF1 BRCA1 ZBTB7B RAD21 YY1 MDM1 LINC02384 RAP1B NUP107 LOC100507250 RPL7P42 SNORA70G RPL10P12 ENSG00000256273 GC12P068422
GH12H068378 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -305.6 -305578 1 FOXA2 STAT1 KLF1 TAL1 CEBPB KLF4 EP300 FOXA1 ZNF217 TCF12 MDM1 LINC02384 LOC100507250 NUP107 RPL7P42 RAP1B ENSG00000256273 GC12P068422
GH12H069358 1.1 ENCODE 14.6 +675.4 675407 2 HDGF FOXA2 PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 LYZ YEATS4 NUP107 CPSF6 ENSG00000258140 RPL7P42 RAP1B CNOT2 KRT8P39 CCT2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7P42 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7P42 Gene

Chromosome:
12
Start:
68,684,595 bp from pter
End:
68,686,308 bp from pter
Size:
1,714 bases
Orientation:
Plus strand

Genomic View for RPL7P42 Gene

Genes around RPL7P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P42 Gene

Proteins for RPL7P42 Gene

Post-translational modifications for RPL7P42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P42 Gene

Domains & Families for RPL7P42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7P42 Gene

Function for RPL7P42 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL7P42
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P42 Gene

Localization for RPL7P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7P42 Gene

Pathways & Interactions for RPL7P42 Gene

SuperPathways for RPL7P42 Gene

No Data Available

Interacting Proteins for RPL7P42 Gene

Gene Ontology (GO) - Biological Process for RPL7P42 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7P42 Gene

Drugs & Compounds for RPL7P42 Gene

No Compound Related Data Available

Transcripts for RPL7P42 Gene

mRNA/cDNA for RPL7P42 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL7P42
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P42 Gene

No ASD Table

Relevant External Links for RPL7P42 Gene

GeneLoc Exon Structure for
RPL7P42
ECgene alternative splicing isoforms for
RPL7P42

Expression for RPL7P42 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7P42 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7P42 Gene

This gene is overexpressed in Testis (x20.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL7P42 Gene:

RPL7P42
genes like me logo Genes that share expression patterns with RPL7P42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7P42 Gene

Orthologs for RPL7P42 Gene

Evolution for RPL7P42 Gene

ENSEMBL:
Gene Tree for RPL7P42 (if available)
TreeFam:
Gene Tree for RPL7P42 (if available)

No data available for Orthologs for RPL7P42 Gene

Paralogs for RPL7P42 Gene

No data available for Paralogs for RPL7P42 Gene

Variants for RPL7P42 Gene

Relevant External Links for RPL7P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P42 Gene

Disorders for RPL7P42 Gene

No disorders were found for RPL7P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P42 Gene

Publications for RPL7P42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL7P42 Gene

Sources for RPL7P42 Gene

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