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Aliases for RPL7P42 Gene

Aliases for RPL7P42 Gene

  • Ribosomal Protein L7 Pseudogene 42 2 3 5
  • RPL7_22_1255 3

External Ids for RPL7P42 Gene

Previous GeneCards Identifiers for RPL7P42 Gene

  • GC12U901118
  • GC12P069079

Summaries for RPL7P42 Gene

GeneCards Summary for RPL7P42 Gene

RPL7P42 (Ribosomal Protein L7 Pseudogene 42) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7P42 Gene

Genomics for RPL7P42 Gene

Regulatory Elements for RPL7P42 Gene

Enhancers for RPL7P42 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F068803 1.4 FANTOM5 Ensembl ENCODE 16.3 +122.1 122107 7.0 MLX FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 SP3 NFYC TBX21 NUP107 KRT8P39 RPL10P12 RPL7P42 LOC105369821 ENSG00000256273 ATP5HP4 MDM2 LOC100130075 SLC35E3
GH12F069358 1 ENCODE 16.2 +675.4 675407 2.2 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 LYZ YEATS4 LOC105369821 RPL7P42 NUP107 RN7SL804P
GH12F068647 0.2 ENCODE 11.9 -36.5 -36492 0.9 PKNOX1 JUNB RPL7P42 LOC100507250 NUP107 LOC100507195 MDM1 PIR45036 ATP5HP4
GH12F068642 0.7 FANTOM5 11.9 -41.5 -41486 0.5 NUP107 RPL7P42 LOC100507250 LOC100507195 MDM1 RAP1B ATP5HP4 PIR45036
GH12F068377 1.3 FANTOM5 Ensembl ENCODE 10.9 -305.8 -305794 2.8 HDAC1 KLF1 TBL1XR1 TAL1 ZNF316 CTBP1 GATA2 NCOR1 ADNP ETV6 MDM1 LOC100507195 RPL7P42 NUP107 LOC100507250 RAP1B ENSG00000256273 GC12P068422
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL7P42 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7P42 Gene

Chromosome:
12
Start:
68,684,595 bp from pter
End:
68,686,308 bp from pter
Size:
1,714 bases
Orientation:
Plus strand

Genomic View for RPL7P42 Gene

Genes around RPL7P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P42 Gene

Proteins for RPL7P42 Gene

Post-translational modifications for RPL7P42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P42 Gene

Domains & Families for RPL7P42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7P42 Gene

Function for RPL7P42 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P42 Gene

Localization for RPL7P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7P42 Gene

Pathways & Interactions for RPL7P42 Gene

SuperPathways for RPL7P42 Gene

No Data Available

Interacting Proteins for RPL7P42 Gene

Gene Ontology (GO) - Biological Process for RPL7P42 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7P42 Gene

Transcripts for RPL7P42 Gene

mRNA/cDNA for RPL7P42 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P42 Gene

No ASD Table

Relevant External Links for RPL7P42 Gene

GeneLoc Exon Structure for
RPL7P42
ECgene alternative splicing isoforms for
RPL7P42

Expression for RPL7P42 Gene

mRNA expression in normal human tissues for RPL7P42 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7P42 Gene

This gene is overexpressed in Testis (x20.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL7P42 Gene:

RPL7P42
genes like me logo Genes that share expression patterns with RPL7P42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL7P42 Gene

Orthologs for RPL7P42 Gene

Evolution for RPL7P42 Gene

ENSEMBL:
Gene Tree for RPL7P42 (if available)
TreeFam:
Gene Tree for RPL7P42 (if available)

No data available for Orthologs for RPL7P42 Gene

Paralogs for RPL7P42 Gene

No data available for Paralogs for RPL7P42 Gene

Variants for RPL7P42 Gene

Relevant External Links for RPL7P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P42 Gene

Disorders for RPL7P42 Gene

No disorders were found for RPL7P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P42 Gene

Publications for RPL7P42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7P42 Gene

Sources for RPL7P42 Gene

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