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Aliases for RPL7P4 Gene

Subcategory (RNA class) for RPL7P4 Gene

lncRNA

Aliases for RPL7P4 Gene

  • Ribosomal Protein L7 Pseudogene 4 2 3 5
  • Em:AB023049.2 3
  • RPL7_10_678 3

External Ids for RPL7P4 Gene

ORGUL Members for RPL7P4 Gene

Previous GeneCards Identifiers for RPL7P4 Gene

  • GC00U914405
  • GC06U900676
  • GC06M030772
  • GC06M030665
  • GC06M030464
  • GC06Mi30672
  • GC06M030672

Summaries for RPL7P4 Gene

GeneCards Summary for RPL7P4 Gene

RPL7P4 (Ribosomal Protein L7 Pseudogene 4) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7P4 Gene

Genomics for RPL7P4 Gene

Regulatory Elements for RPL7P4 Gene

Enhancers for RPL7P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F030678 0.9 FANTOM5 ENCODE 20.6 +12.2 12211 13.5 CREB3L1 MLX YBX1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF263 SP3 IER3 RPL7P4 HLA-E PPP1R18 PPP1R10 TMPOP1 UBQLN1P1 ENSG00000233902 SNORA38 HLA-P
GH06F030715 1 ENCODE 20.5 -22.0 -21991 7.7 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 DDX39B LY6G5B PPP1R10 DHX16 MICA HLA-F-AS1 PAIP1P1 HCG9P5 HLA-K MICE
GH06F030746 1.4 FANTOM5 Ensembl ENCODE 20.4 -53.9 -53892 9.5 MLX CREB3L1 ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 IER3 GTF2H4 PPP1R10 DHX16 LY6G5B MICA PAIP1P1 DDX39B ABCF1 HLA-K
GH06F030645 0.2 ENCODE 20.4 +50.2 50245 2.6 HDGF PKNOX1 ARNT MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 RPL7P4 ABCF1 TMPOP1 UBQLN1P1 SNORA38 HLA-P ENSG00000233902 DHX16 DDX39B HCG18
GH06F030611 0.2 ENCODE 20.4 +81.9 81943 8.6 CREB3L1 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ABCF1 PPP1R10 DHX16 DDX39B GTF2H4 HCG18 RPL7P4 TMPOP1 UBQLN1P1 ENSG00000233902
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL7P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7P4 Gene

Chromosome:
6
Start:
30,696,746 bp from pter
End:
30,697,536 bp from pter
Size:
791 bases
Orientation:
Minus strand

Genomic View for RPL7P4 Gene

Genes around RPL7P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RPL7P4 Gene

Post-translational modifications for RPL7P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P4 Gene

Domains & Families for RPL7P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7P4 Gene

Function for RPL7P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P4 Gene

Localization for RPL7P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7P4 Gene

Pathways & Interactions for RPL7P4 Gene

SuperPathways for RPL7P4 Gene

No Data Available

Interacting Proteins for RPL7P4 Gene

Gene Ontology (GO) - Biological Process for RPL7P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7P4 Gene

Transcripts for RPL7P4 Gene

mRNA/cDNA for RPL7P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P4 Gene

No ASD Table

Relevant External Links for RPL7P4 Gene

GeneLoc Exon Structure for
RPL7P4
ECgene alternative splicing isoforms for
RPL7P4

Expression for RPL7P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7P4 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7P4 Gene

This gene is overexpressed in Testis (x6.5) and Brain - Cerebellum (x6.1).

NURSA nuclear receptor signaling pathways regulating expression of RPL7P4 Gene:

RPL7P4
genes like me logo Genes that share expression patterns with RPL7P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL7P4 Gene

Orthologs for RPL7P4 Gene

Evolution for RPL7P4 Gene

ENSEMBL:
Gene Tree for RPL7P4 (if available)
TreeFam:
Gene Tree for RPL7P4 (if available)

No data available for Orthologs for RPL7P4 Gene

Paralogs for RPL7P4 Gene

No data available for Paralogs for RPL7P4 Gene

Variants for RPL7P4 Gene

Relevant External Links for RPL7P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P4 Gene

Disorders for RPL7P4 Gene

No disorders were found for RPL7P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P4 Gene

Publications for RPL7P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7P4 Gene

Sources for RPL7P4 Gene

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