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Aliases for RPL7P28 Gene

Aliases for RPL7P28 Gene

  • Ribosomal Protein L7 Pseudogene 28 2 3 5
  • RPL7_12_736 3

External Ids for RPL7P28 Gene

Previous GeneCards Identifiers for RPL7P28 Gene

  • GC06U901584
  • GC06M109650

Summaries for RPL7P28 Gene

GeneCards Summary for RPL7P28 Gene

RPL7P28 (Ribosomal Protein L7 Pseudogene 28) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7P28 Gene

Genomics for RPL7P28 Gene

Regulatory Elements for RPL7P28 Gene

Enhancers for RPL7P28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F109332 0.8 Ensembl ENCODE 0.8 -5.0 -4963 1.0 ELF3 CTCF NR2F6 RARA SMPD2 ENSG00000233908 PTCHD3P3 CCDC162P CD164 RPL7P28 LOC101927538
GH06F109322 0.7 Ensembl 0.8 +4.4 4430 1.4 PKNOX1 CBX3 ZNF175 BACH1 PYGO2 ZBTB40 GATA2 ETV6 ZBTB11 MNT CCDC162P CD164 PTCHD3P3 ENSG00000233908 RPL7P28 RNY3P11
GH06F109316 1.1 Ensembl ENCODE 0.4 +9.3 9332 4.0 SOX13 TFAP4 ZNF146 SAP130 ARID4B ZIC2 RAD21 ZNF7 YY1 POLR2A CD164 CCDC162P PTCHD3P3 ENSG00000233908 PPIL6 SMPD2 RPL7P28 RNY3P11
GH06F109336 1.1 Ensembl ENCODE 0.4 -8.9 -8948 1.4 PKNOX1 PTRF RAD21 SMARCA5 CEBPB TFDP1 ATF4 PBX2 IKZF1 CEBPA ENSG00000233908 PTCHD3P3 CCDC162P CD164 RPL7P28 LOC101927538
GH06F109349 1.4 FANTOM5 Ensembl ENCODE 0.3 -22.9 -22894 3.4 HDAC1 ATF1 ARNT NFRKB RAD21 GATA2 ZMIZ1 HCFC1 CEBPB ZEB2 SMPD2 ENSG00000260273 CD164 PTCHD3P3 ENSG00000233908 CCDC162P MICAL1 FIG4 LOC101927538 RPL7P28
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7P28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7P28 Gene

Chromosome:
6
Start:
109,327,175 bp from pter
End:
109,327,914 bp from pter
Size:
740 bases
Orientation:
Minus strand

Genomic View for RPL7P28 Gene

Genes around RPL7P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P28 Gene

Proteins for RPL7P28 Gene

Post-translational modifications for RPL7P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P28 Gene

Domains & Families for RPL7P28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7P28 Gene

Function for RPL7P28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P28 Gene

Localization for RPL7P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7P28 Gene

Pathways & Interactions for RPL7P28 Gene

SuperPathways for RPL7P28 Gene

No Data Available

Interacting Proteins for RPL7P28 Gene

Gene Ontology (GO) - Biological Process for RPL7P28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7P28 Gene

Transcripts for RPL7P28 Gene

mRNA/cDNA for RPL7P28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P28 Gene

No ASD Table

Relevant External Links for RPL7P28 Gene

GeneLoc Exon Structure for
RPL7P28
ECgene alternative splicing isoforms for
RPL7P28

Expression for RPL7P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7P28 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7P28 Gene

This gene is overexpressed in Colon - Transverse (x7.4).

NURSA nuclear receptor signaling pathways regulating expression of RPL7P28 Gene:

RPL7P28
genes like me logo Genes that share expression patterns with RPL7P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL7P28 Gene

Orthologs for RPL7P28 Gene

Evolution for RPL7P28 Gene

ENSEMBL:
Gene Tree for RPL7P28 (if available)
TreeFam:
Gene Tree for RPL7P28 (if available)

No data available for Orthologs for RPL7P28 Gene

Paralogs for RPL7P28 Gene

No data available for Paralogs for RPL7P28 Gene

Variants for RPL7P28 Gene

Relevant External Links for RPL7P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P28 Gene

Disorders for RPL7P28 Gene

No disorders were found for RPL7P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P28 Gene

Publications for RPL7P28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7P28 Gene

Sources for RPL7P28 Gene

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