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Aliases for RPL7P17 Gene

Subcategory (RNA class) for RPL7P17 Gene

lncRNA

Aliases for RPL7P17 Gene

  • Ribosomal Protein L7 Pseudogene 17 2 3 5
  • RPL7_6_493 3

External Ids for RPL7P17 Gene

ORGUL Members for RPL7P17 Gene

Previous GeneCards Identifiers for RPL7P17 Gene

  • GC04U901003
  • GC04M078004

Summaries for RPL7P17 Gene

GeneCards Summary for RPL7P17 Gene

RPL7P17 (Ribosomal Protein L7 Pseudogene 17) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7P17 Gene

Genomics for RPL7P17 Gene

Regulatory Elements for RPL7P17 Gene

Enhancers for RPL7P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F077071 0.6 ENCODE 20.5 +8.4 8387 5.8 CREB3L1 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF263 SP3 CNOT6L RPL7P17 SCARB2 GC04P077075 GC04M077051
GH04F076947 1.1 FANTOM5 ENCODE 10.2 +132.9 132876 5.5 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF263 SDAD1 RPL7P17 SOWAHB CNOT6L SEPT11 MRPL1 GC04P076953
GH04F077151 0.4 ENCODE 9.9 -72.9 -72850 8.4 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 CNOT6L RPL7P17 CCNG2 LOC101928864 GC04M077151 RNU6-1187P
GH04F076657 1 Ensembl ENCODE 5 +424.4 424380 2.6 JUND JUN CEBPB FOS RAD21 SHROOM3 RPL7P17 SUMO2P11 LOC105377290
GH04F076637 0.8 Ensembl ENCODE 5 +443.9 443907 4.3 GTF2F1 TBP MXI1 TAF1 JUN CEBPB EP300 RAD21 YY1 NR2F2 SHROOM3 RNU6-145P RPL7P17 ENSG00000231335 GC04M076633
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL7P17 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7P17 Gene

Chromosome:
4
Start:
77,082,399 bp from pter
End:
77,083,126 bp from pter
Size:
728 bases
Orientation:
Minus strand

Genomic View for RPL7P17 Gene

Genes around RPL7P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P17 Gene

Proteins for RPL7P17 Gene

Post-translational modifications for RPL7P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P17 Gene

Domains & Families for RPL7P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7P17 Gene

Function for RPL7P17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P17 Gene

Localization for RPL7P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7P17 Gene

Pathways & Interactions for RPL7P17 Gene

SuperPathways for RPL7P17 Gene

No Data Available

Interacting Proteins for RPL7P17 Gene

Gene Ontology (GO) - Biological Process for RPL7P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7P17 Gene

Transcripts for RPL7P17 Gene

mRNA/cDNA for RPL7P17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P17 Gene

No ASD Table

Relevant External Links for RPL7P17 Gene

GeneLoc Exon Structure for
RPL7P17
ECgene alternative splicing isoforms for
RPL7P17

Expression for RPL7P17 Gene

mRNA expression in normal human tissues for RPL7P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7P17 Gene:

RPL7P17
genes like me logo Genes that share expression patterns with RPL7P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL7P17 Gene

Orthologs for RPL7P17 Gene

Evolution for RPL7P17 Gene

ENSEMBL:
Gene Tree for RPL7P17 (if available)
TreeFam:
Gene Tree for RPL7P17 (if available)

No data available for Orthologs for RPL7P17 Gene

Paralogs for RPL7P17 Gene

No data available for Paralogs for RPL7P17 Gene

Variants for RPL7P17 Gene

Relevant External Links for RPL7P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P17 Gene

Disorders for RPL7P17 Gene

No disorders were found for RPL7P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P17 Gene

Publications for RPL7P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7P17 Gene

Sources for RPL7P17 Gene

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