Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL7P17 Gene

Subcategory (RNA class) for RPL7P17 Gene

lncRNA

Aliases for RPL7P17 Gene

  • Ribosomal Protein L7 Pseudogene 17 2 3 5
  • RPL7_6_493 3

External Ids for RPL7P17 Gene

ORGUL Members for RPL7P17 Gene

Previous GeneCards Identifiers for RPL7P17 Gene

  • GC04U901003
  • GC04M078004

Summaries for RPL7P17 Gene

GeneCards Summary for RPL7P17 Gene

RPL7P17 (Ribosomal Protein L7 Pseudogene 17) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL7P17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7P17 Gene

Genomics for RPL7P17 Gene

GeneHancer (GH) Regulatory Elements for RPL7P17 Gene

Promoters and enhancers for RPL7P17 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I077083 Enhancer 0.6 dbSUPER 550.8 -0.3 -255 0.6 ATF4 POLR2A SOX6 GABPB1 HMBOX1 ZBTB33 GABPA SETDB1 RPL7P17 GC04M077080
GH04I077072 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 37.8 +8.4 8387 5.8 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF416 ZNF143 CCNI GC04P077075 NUP54 CNOT6L RPL7P17 GC04M077051
GH04I077816 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.1 -737.2 -737234 8 HDGF PKNOX1 FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B CNOT6L RPL7P17 FRAS1 MRPL1
GH04I077860 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.1 -779.3 -779339 3.9 MLX ZFP64 DMAP1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC MEF2D MRPL1 CNOT6L SERBP1P5 RPL7P17 ENSG00000250214
GH04I077151 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10 -72.8 -72849 8.4 CLOCK FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC PPARGC1A CCNG2 LOC101928864 CNOT6L RPL7P17 GC04M077151 RNU6-1187P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL7P17 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7P17 Gene

Genomic Locations for RPL7P17 Gene
chr4:77,082,399-77,083,126
(GRCh38/hg38)
Size:
728 bases
Orientation:
Minus strand
chr4:78,003,552-78,004,279
(GRCh37/hg19)

Genomic View for RPL7P17 Gene

Genes around RPL7P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P17 Gene

Proteins for RPL7P17 Gene

Post-translational modifications for RPL7P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P17 Gene

Domains & Families for RPL7P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7P17 Gene

Function for RPL7P17 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P17 Gene

Localization for RPL7P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7P17 Gene

Pathways & Interactions for RPL7P17 Gene

SuperPathways for RPL7P17 Gene

No Data Available

Interacting Proteins for RPL7P17 Gene

Gene Ontology (GO) - Biological Process for RPL7P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7P17 Gene

Drugs & Compounds for RPL7P17 Gene

No Compound Related Data Available

Transcripts for RPL7P17 Gene

mRNA/cDNA for RPL7P17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P17 Gene

No ASD Table

Relevant External Links for RPL7P17 Gene

GeneLoc Exon Structure for
RPL7P17
ECgene alternative splicing isoforms for
RPL7P17

Expression for RPL7P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7P17 Gene:

RPL7P17
genes like me logo Genes that share expression patterns with RPL7P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7P17 Gene

Orthologs for RPL7P17 Gene

Evolution for RPL7P17 Gene

ENSEMBL:
Gene Tree for RPL7P17 (if available)
TreeFam:
Gene Tree for RPL7P17 (if available)

No data available for Orthologs for RPL7P17 Gene

Paralogs for RPL7P17 Gene

No data available for Paralogs for RPL7P17 Gene

Variants for RPL7P17 Gene

Additional Variant Information for RPL7P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P17 Gene

Disorders for RPL7P17 Gene

No disorders were found for RPL7P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P17 Gene

Publications for RPL7P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL7P17 Gene

Sources for RPL7P17 Gene

Content
Loading form....