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Aliases for RPL7P16 Gene

Aliases for RPL7P16 Gene

  • Ribosomal Protein L7 Pseudogene 16 2 3 5
  • RPL7_5_405 3

External Ids for RPL7P16 Gene

Previous GeneCards Identifiers for RPL7P16 Gene

  • GC03M133446
  • GC03M131963

Summaries for RPL7P16 Gene

GeneCards Summary for RPL7P16 Gene

RPL7P16 (Ribosomal Protein L7 Pseudogene 16) is a Pseudogene.

Additional gene information for RPL7P16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7P16 Gene

Genomics for RPL7P16 Gene

GeneHancer (GH) Regulatory Elements for RPL7P16 Gene

Promoters and enhancers for RPL7P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I132242 Enhancer 0.2 FANTOM5 550.8 +1.1 1140 0.3 RPL7P16 GC03M132244 UBA5 TRC-GCA9-1 CPNE4
GH03I132133 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 5.3 +109.0 109039 3.7 SP1 JUND ATF3 POLR2A JUN SIX5 FOSL2 FOS RPL7P16 LOC729674 GC03M131998 CPNE4
GH03I132282 Enhancer 0.9 Ensembl ENCODE 4.3 -40.4 -40447 3.5 CTCF USF1 MAX POLR2A HNF4G STAT1 RXRA ZNF740 CEBPB USF2 CPNE4 ACPP RPL7P16
GH03I132267 Enhancer 0.3 ENCODE 9.9 -23.5 -23493 1.3 GATA3 RPL7P16 NPHP3 CPNE4
GH03I132205 Enhancer 0.2 ENCODE 5 +38.6 38631 1.1 NPHP3 RPL7P16 GC03M132230 TRC-GCA6-1 LOC729674 CPNE4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL7P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7P16 Gene

Genomic Locations for RPL7P16 Gene
chr3:132,243,460-132,244,286
(GRCh38/hg38)
Size:
827 bases
Orientation:
Minus strand
chr3:131,962,304-131,963,130
(GRCh37/hg19)

Genomic View for RPL7P16 Gene

Genes around RPL7P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P16 Gene

Proteins for RPL7P16 Gene

Post-translational modifications for RPL7P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P16 Gene

Domains & Families for RPL7P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7P16 Gene

Function for RPL7P16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P16 Gene

Localization for RPL7P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7P16 Gene

Pathways & Interactions for RPL7P16 Gene

SuperPathways for RPL7P16 Gene

No Data Available

Interacting Proteins for RPL7P16 Gene

Gene Ontology (GO) - Biological Process for RPL7P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7P16 Gene

Drugs & Compounds for RPL7P16 Gene

No Compound Related Data Available

Transcripts for RPL7P16 Gene

mRNA/cDNA for RPL7P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P16 Gene

No ASD Table

Relevant External Links for RPL7P16 Gene

GeneLoc Exon Structure for
RPL7P16
ECgene alternative splicing isoforms for
RPL7P16

Expression for RPL7P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7P16 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7P16 Gene

This gene is overexpressed in Prostate (x44.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL7P16 Gene:

RPL7P16
genes like me logo Genes that share expression patterns with RPL7P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7P16 Gene

Orthologs for RPL7P16 Gene

Evolution for RPL7P16 Gene

ENSEMBL:
Gene Tree for RPL7P16 (if available)
TreeFam:
Gene Tree for RPL7P16 (if available)

No data available for Orthologs for RPL7P16 Gene

Paralogs for RPL7P16 Gene

No data available for Paralogs for RPL7P16 Gene

Variants for RPL7P16 Gene

Additional Variant Information for RPL7P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P16 Gene

Disorders for RPL7P16 Gene

Additional Disease Information for RPL7P16

Genetic Association Database
(GAD)

No disorders were found for RPL7P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7P16 Gene

Publications for RPL7P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58

Products for RPL7P16 Gene

Sources for RPL7P16 Gene

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