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Aliases for RPL7L1P9 Gene

Subcategory (RNA class) for RPL7L1P9 Gene

lncRNA

Aliases for RPL7L1P9 Gene

  • Ribosomal Protein L7 Like 1 Pseudogene 9 2 3 5
  • Ribosomal Protein L7-Like 1 Pseudogene 9 2

External Ids for RPL7L1P9 Gene

ORGUL Members for RPL7L1P9 Gene

Previous GeneCards Identifiers for RPL7L1P9 Gene

  • GC02M218627

Summaries for RPL7L1P9 Gene

GeneCards Summary for RPL7L1P9 Gene

RPL7L1P9 (Ribosomal Protein L7 Like 1 Pseudogene 9) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for RPL7L1P9 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for RPL7L1P9

Additional gene information for RPL7L1P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RPL7L1P9 Gene

Genomics for RPL7L1P9 Gene

GeneHancer (GH) Regulatory Elements for RPL7L1P9 Gene

Promoters and enhancers for RPL7L1P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I217103 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 5.3 +656.1 656128 4.1 HDAC1 PKNOX1 TAF9B ARNT NFRKB YBX1 RAD21 ZNF143 RCOR1 FOS RPL7L1P9 DIRC3 TNS1 LOC105373873 LOC105373872 LOC101928278
GH02I217732 Enhancer 0.6 Ensembl ENCODE dbSUPER 12.1 +28.2 28180 1.9 DIRC3 RPL7L1P9 LOC105373878 TNS1 ENSG00000231597 ENSG00000227021 LOC105373876 TNP1 LINC01921 GC02M217721
GH02I217735 Enhancer 0.5 FANTOM5 dbSUPER 12.1 +25.3 25266 0.2 DIRC3 RPL7L1P9 LOC105373878 TNS1 LINC01921 ENSG00000227021 LOC105373876 ENSG00000231597 TNP1 GC02M217721
GH02I217756 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.8 +4.6 4585 0.7 CTCF USF1 ARNT MAX ZNF48 RAD21 ZNF335 ZFHX2 GLIS2 ZBTB48 DIRC3 RPL7L1P9
GH02I217789 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -28.9 -28888 2.1 ELF3 RB1 ARID4B SIN3A ZNF2 KLF5 THRB ZNF48 ZSCAN9 RAD21 RUFY4 TNS1 LOC105373878 DIRC3 GC02M217800 RPL7L1P9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL7L1P9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7L1P9 Gene

Genomic Locations for RPL7L1P9 Gene
chr2:217,760,538-217,761,296
(GRCh38/hg38)
Size:
759 bases
Orientation:
Minus strand
chr2:218,625,261-218,626,019
(GRCh37/hg19)

Genomic View for RPL7L1P9 Gene

Genes around RPL7L1P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7L1P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7L1P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7L1P9 Gene

ORGUL Member Location for RPL7L1P9 Gene

ORGUL Member Location for RPL7L1P9 gene

Proteins for RPL7L1P9 Gene

Post-translational modifications for RPL7L1P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7L1P9 Gene

Domains & Families for RPL7L1P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7L1P9 Gene

Function for RPL7L1P9 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7L1P9 Gene

Localization for RPL7L1P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7L1P9 Gene

Pathways & Interactions for RPL7L1P9 Gene

SuperPathways for RPL7L1P9 Gene

No Data Available

Interacting Proteins for RPL7L1P9 Gene

Gene Ontology (GO) - Biological Process for RPL7L1P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7L1P9 Gene

Drugs & Compounds for RPL7L1P9 Gene

No Compound Related Data Available

Transcripts for RPL7L1P9 Gene

fRNAdb Secondary structures for RPL7L1P9 Gene

  • FR184898

mRNA/cDNA for RPL7L1P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7L1P9 Gene

No ASD Table

Relevant External Links for RPL7L1P9 Gene

GeneLoc Exon Structure for
RPL7L1P9
ECgene alternative splicing isoforms for
RPL7L1P9

Expression for RPL7L1P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7L1P9 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7L1P9 Gene

This gene is overexpressed in Artery - Aorta (x6.0), Artery - Tibial (x4.8), and Artery - Coronary (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of RPL7L1P9 Gene:

RPL7L1P9
genes like me logo Genes that share expression patterns with RPL7L1P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7L1P9 Gene

Orthologs for RPL7L1P9 Gene

Evolution for RPL7L1P9 Gene

ENSEMBL:
Gene Tree for RPL7L1P9 (if available)
TreeFam:
Gene Tree for RPL7L1P9 (if available)

No data available for Orthologs for RPL7L1P9 Gene

Paralogs for RPL7L1P9 Gene

No data available for Paralogs for RPL7L1P9 Gene

Variants for RPL7L1P9 Gene

Additional Variant Information for RPL7L1P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7L1P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7L1P9 Gene

Disorders for RPL7L1P9 Gene

No disorders were found for RPL7L1P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7L1P9 Gene

Publications for RPL7L1P9 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for RPL7L1P9 Gene

Sources for RPL7L1P9 Gene

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