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Aliases for RPL7L1P3 Gene

Subcategory (RNA class) for RPL7L1P3 Gene

lncRNA

Aliases for RPL7L1P3 Gene

  • Ribosomal Protein L7 Like 1 Pseudogene 3 2 3 5
  • Ribosomal Protein L7-Like 1 Pseudogene 3 2

External Ids for RPL7L1P3 Gene

ORGUL Members for RPL7L1P3 Gene

Previous GeneCards Identifiers for RPL7L1P3 Gene

  • GC07P075555

Summaries for RPL7L1P3 Gene

GeneCards Summary for RPL7L1P3 Gene

RPL7L1P3 (Ribosomal Protein L7 Like 1 Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for RPL7L1P3 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for RPL7L1P3

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RPL7L1P3 Gene

Genomics for RPL7L1P3 Gene

Regulatory Elements for RPL7L1P3 Gene

Enhancers for RPL7L1P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F075924 0.9 Ensembl ENCODE 0.8 +4.8 4778 5.5 ZFP64 RAD21 RARA YY1 ZNF121 SCRT2 CREM ZNF680 ZNF654 ZBTB11 MDH2 ZP3 STYXL1 RPL7L1P3 GC07P075945
GH07F075913 0.6 Ensembl ENCODE 0.8 -4.0 -3991 9.5 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 LOC100133091 RHBDD2 SNORA14A CCL26 POR ZP3 RPL7L1P3 MIR4651
GH07F075931 1.4 FANTOM5 Ensembl ENCODE 0.4 +11.1 11098 4.5 PKNOX1 CBX3 SIN3A FEZF1 RAD21 YY1 ZNF366 RCOR1 EGR2 CEBPB POR GC07P075945 RPL7L1P3
GH07F075905 1.2 Ensembl ENCODE 0.3 -16.1 -16058 3.0 PKNOX1 ATF1 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 GATA2 FOS SNORA14A CCL26 CCL24 SRRM3 UPK3B ZP3 MIR4651 POR RPL7L1P3
GH07F075937 1.3 FANTOM5 Ensembl ENCODE 0.3 +15.7 15650 2.2 HDGF PKNOX1 ATF1 ARNT CREB3L1 SIN3A ZNF121 ELK1 GATA2 FOS POR POMZP3 STYXL1 RHBDD2 GTF2IP1 GC07P075945 RPL7L1P3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL7L1P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7L1P3 Gene

Chromosome:
7
Start:
75,922,750 bp from pter
End:
75,923,455 bp from pter
Size:
706 bases
Orientation:
Plus strand

Genomic View for RPL7L1P3 Gene

Genes around RPL7L1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7L1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7L1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7L1P3 Gene

ORGUL Member Location for RPL7L1P3 Gene

ORGUL Member Location for RPL7L1P3 gene

Proteins for RPL7L1P3 Gene

Post-translational modifications for RPL7L1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7L1P3 Gene

Domains & Families for RPL7L1P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7L1P3 Gene

Function for RPL7L1P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7L1P3 Gene

Localization for RPL7L1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7L1P3 Gene

Pathways & Interactions for RPL7L1P3 Gene

SuperPathways for RPL7L1P3 Gene

No Data Available

Interacting Proteins for RPL7L1P3 Gene

Gene Ontology (GO) - Biological Process for RPL7L1P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7L1P3 Gene

Transcripts for RPL7L1P3 Gene

fRNAdb Secondary structures for RPL7L1P3 Gene

  • FR021829

mRNA/cDNA for RPL7L1P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7L1P3 Gene

No ASD Table

Relevant External Links for RPL7L1P3 Gene

GeneLoc Exon Structure for
RPL7L1P3
ECgene alternative splicing isoforms for
RPL7L1P3

Expression for RPL7L1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7L1P3 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7L1P3 Gene

This gene is overexpressed in Liver (x9.9) and Whole Blood (x6.6).

NURSA nuclear receptor signaling pathways regulating expression of RPL7L1P3 Gene:

RPL7L1P3
genes like me logo Genes that share expression patterns with RPL7L1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL7L1P3 Gene

Orthologs for RPL7L1P3 Gene

Evolution for RPL7L1P3 Gene

ENSEMBL:
Gene Tree for RPL7L1P3 (if available)
TreeFam:
Gene Tree for RPL7L1P3 (if available)

No data available for Orthologs for RPL7L1P3 Gene

Paralogs for RPL7L1P3 Gene

No data available for Paralogs for RPL7L1P3 Gene

Variants for RPL7L1P3 Gene

Relevant External Links for RPL7L1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7L1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7L1P3 Gene

Disorders for RPL7L1P3 Gene

No disorders were found for RPL7L1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7L1P3 Gene

Publications for RPL7L1P3 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for RPL7L1P3 Gene

Sources for RPL7L1P3 Gene

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