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Aliases for RPL7L1 Gene

Aliases for RPL7L1 Gene

  • Ribosomal Protein L7-Like 1 2 3
  • 60S Ribosomal Protein L7-Like 1 3
  • DJ475N16.4 3

External Ids for RPL7L1 Gene

Previous GeneCards Identifiers for RPL7L1 Gene

  • GC06P042894
  • GC06P042956
  • GC06P042565

Summaries for RPL7L1 Gene

GeneCards Summary for RPL7L1 Gene

RPL7L1 (Ribosomal Protein L7-Like 1) is a Protein Coding gene. An important paralog of this gene is RPL7.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7L1 Gene

Genomics for RPL7L1 Gene

Regulatory Elements for RPL7L1 Gene

Genomic Location for RPL7L1 Gene

Start:
42,879,616 bp from pter
End:
42,889,925 bp from pter
Size:
10,310 bases
Orientation:
Plus strand

Genomic View for RPL7L1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RPL7L1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7L1 Gene

Proteins for RPL7L1 Gene

  • Protein details for RPL7L1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6DKI1-RL7L_HUMAN
    Recommended name:
    60S ribosomal protein L7-like 1
    Protein Accession:
    Q6DKI1
    Secondary Accessions:
    • A8K7D4
    • B7Z652
    • Q5TFZ5
    • Q6PEK3

    Protein attributes for RPL7L1 Gene

    Size:
    246 amino acids
    Molecular mass:
    28661 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for RPL7L1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for RPL7L1 Gene

Proteomics data for RPL7L1 Gene at MOPED

Post-translational modifications for RPL7L1 Gene

  • Ubiquitination at Lys122 and Lys129
  • Modification sites at PhosphoSitePlus

Other Protein References for RPL7L1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RPL7L1 Gene

Domains for RPL7L1 Gene

Gene Families for RPL7L1 Gene

HGNC:
  • RPL :L ribosomal proteins

Suggested Antigen Peptide Sequences for RPL7L1 Gene

Graphical View of Domain Structure for InterPro Entry

Q6DKI1

UniProtKB/Swiss-Prot:

RL7L_HUMAN :
  • Q6DKI1
Family:
  • Belongs to the ribosomal protein L30P family.
genes like me logo Genes that share domains with RPL7L1: view

Function for RPL7L1 Gene

Gene Ontology (GO) - Molecular Function for RPL7L1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0044822 poly(A) RNA binding IDA 22658674
genes like me logo Genes that share ontologies with RPL7L1: view

Phenotypes for RPL7L1 Gene

genes like me logo Genes that share phenotypes with RPL7L1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for RPL7L1 Gene

Localization for RPL7L1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RPL7L1 Gene COMPARTMENTS Subcellular localization image for RPL7L1 gene
Compartment Confidence
cytosol 3
nucleus 2
mitochondrion 1

Gene Ontology (GO) - Cellular Components for RPL7L1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005840 ribosome IEA --
genes like me logo Genes that share ontologies with RPL7L1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for RPL7L1 Gene

Pathways for RPL7L1 Gene

SuperPathways for RPL7L1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL7L1 Gene

None

No data available for Pathways by source for RPL7L1 Gene

Transcripts for RPL7L1 Gene

mRNA/cDNA for RPL7L1 Gene

Unigene Clusters for RPL7L1 Gene

Ribosomal protein L7-like 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7L1 Gene

No ASD Table

Relevant External Links for RPL7L1 Gene

GeneLoc Exon Structure for
RPL7L1
ECgene alternative splicing isoforms for
RPL7L1

Expression for RPL7L1 Gene

mRNA expression in normal human tissues for RPL7L1 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for RPL7L1 Gene

SOURCE GeneReport for Unigene cluster for RPL7L1 Gene Hs.520133

genes like me logo Genes that share expressions with RPL7L1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RPL7L1 Gene

Orthologs for RPL7L1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for RPL7L1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RPL7L1 35
  • 99.46 (n)
  • 99.59 (a)
RPL7L1 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RPL7L1 35
  • 87.53 (n)
  • 86.99 (a)
RPL7L1 36
  • 86 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 36
  • 89 (a)
OneToMany
-- 36
  • 80 (a)
OneToMany
RPL7L1 35
  • 88.62 (n)
  • 89.43 (a)
mouse
(Mus musculus)
Mammalia 1700084J12Rik 36
  • 76 (a)
OneToMany
Rpl7l1 35
  • 84.63 (n)
  • 84.08 (a)
Rpl7l1 16
Rpl7l1 36
  • 84 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia RPL7L1 36
  • 72 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RPL7L1 36
  • 69 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rpl7l1 35
  • 86.39 (n)
  • 86.12 (a)
chicken
(Gallus gallus)
Aves RPL7L1 35
  • 68.29 (n)
  • 69.11 (a)
RPL7L1 36
  • 68 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia RPL7L1 36
  • 65 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.25248 35
tropical clawed frog
(Silurana tropicalis)
Amphibia MGC76334 35
zebrafish
(Danio rerio)
Actinopterygii rpl7l1 35
  • 59.49 (n)
  • 61.38 (a)
rpl7l1 36
  • 61 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta RpL7 36
  • 36 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea rpl-7 36
  • 39 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes RPL7A 36
  • 33 (a)
ManyToMany
RPL7B 36
  • 33 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.2360 36
  • 45 (a)
OneToMany
Species with no ortholog for RPL7L1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RPL7L1 Gene

ENSEMBL:
Gene Tree for RPL7L1 (if available)
TreeFam:
Gene Tree for RPL7L1 (if available)

Paralogs for RPL7L1 Gene

Paralogs for RPL7L1 Gene

Selected SIMAP similar genes for RPL7L1 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with RPL7L1: view

Variants for RPL7L1 Gene

Sequence variations from dbSNP and Humsavar for RPL7L1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs7952 -- 42,889,468(+) GCCAG(C/T)GTATG utr-variant-3-prime
rs376942 -- 42,878,404(+) gagcc(A/G)agatc upstream-variant-2KB
rs685096 -- 42,878,040(-) ACTAG(C/G/T)GGGGG upstream-variant-2KB
rs1055969 -- 42,888,592(+) CAGAT(A/G)GTGTT utr-variant-3-prime
rs1055972 -- 42,889,179(+) CTCAC(A/G)CCTGT utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for RPL7L1 Gene

Variant ID Type Subtype PubMed ID
nsv830651 CNV Loss 17160897

Relevant External Links for RPL7L1 Gene

HapMap Linkage Disequilibrium report
RPL7L1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RPL7L1 Gene

Disorders for RPL7L1 Gene

No disorders were found for RPL7L1 Gene.

No data available for UniProtKB/Swiss-Prot for RPL7L1 Gene

Publications for RPL7L1 Gene

  1. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  5. Large-scale mapping of human protein-protein interactions by mass spectrometry. (PMID: 17353931) Ewing R.M. … Figeys D. (Mol. Syst. Biol. 2007) 3

Products for RPL7L1 Gene

  • antibodies-online proteins for RPL7L1
  • antibodies-online antibodies for RPL7L1
  • antibodies-online kits for RPL7L1

Sources for RPL7L1 Gene

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