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Aliases for RPL7AP64 Gene

Subcategory (RNA class) for RPL7AP64 Gene

lncRNA

Aliases for RPL7AP64 Gene

  • Ribosomal Protein L7a Pseudogene 64 2 3 5
  • RPL7A_29_1509 3

External Ids for RPL7AP64 Gene

ORGUL Members for RPL7AP64 Gene

Previous GeneCards Identifiers for RPL7AP64 Gene

  • GC17U901175
  • GC17P007044

Summaries for RPL7AP64 Gene

GeneCards Summary for RPL7AP64 Gene

RPL7AP64 (Ribosomal Protein L7a Pseudogene 64) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP64 Gene

Genomics for RPL7AP64 Gene

Regulatory Elements for RPL7AP64 Gene

Enhancers for RPL7AP64 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G007130 2 FANTOM5 Ensembl ENCODE dbSUPER 8.8 -8.7 -8719 4.0 HDGF PKNOX1 MLX AGO1 WRNIP1 ARID4B SIN3A DMAP1 YY1 SLC30A9 CLEC10A SLC16A11 ASGR1 BCL6B EIF5A RPL7AP64 TRAPPC1 CD68 GABARAP SAT2
GH17G007135 1.4 Ensembl ENCODE dbSUPER 12.3 -3.3 -3286 4.3 AGO1 ARID4B YY1 ZNF121 GLIS2 ZNF143 ZNF207 SP5 REST TBX21 SLC16A11 RPL7AP64 ASGR2 BCL6B MIR324 CLEC10A KCNAB3 LOC105371512
GH17G007112 1.7 FANTOM5 Ensembl ENCODE dbSUPER 6 -28.4 -28393 1.0 PKNOX1 GLI4 ZNF48 YY1 ZNF335 ZNF121 ZNF207 PCBP1 RELB IKZF2 ASGR2 RPL7AP64 ASGR1 XAF1 SLC13A5 CD68 GABARAP TNFSF12 EIF5A RNASEK
GH17G007113 1.5 Ensembl ENCODE dbSUPER 6.6 -26.2 -26162 3.1 HDGF FOXA2 MLX ARNT ARID4B YBX1 DMAP1 YY1 ZNF207 SP5 NLGN2 ATP1B2 LOC100996842 SLC16A11 ASGR2 RPL7AP64 CLEC10A GC17P007092 GC17P007093 GC17P007094
GH17G007141 0.9 ENCODE 0.7 +0.9 949 1.3 HNRNPUL1 PKNOX1 ARID4B SIN3A ZBTB40 ZNF2 RAD21 ZNF366 ZNF143 THAP11 ASGR2 SLC16A11 ASGR1 DVL2 PHF23 GABARAP ENSG00000202251 CLDN7 RPL7AP64 GC17M007141
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP64 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP64 Gene

Chromosome:
17
Start:
7,140,930 bp from pter
End:
7,141,592 bp from pter
Size:
663 bases
Orientation:
Plus strand

Genomic View for RPL7AP64 Gene

Genes around RPL7AP64 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP64 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP64 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP64 Gene

Proteins for RPL7AP64 Gene

Post-translational modifications for RPL7AP64 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP64 Gene

Domains & Families for RPL7AP64 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP64 Gene

Function for RPL7AP64 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP64 Gene

Localization for RPL7AP64 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7AP64 Gene

Pathways & Interactions for RPL7AP64 Gene

SuperPathways for RPL7AP64 Gene

No Data Available

Interacting Proteins for RPL7AP64 Gene

Gene Ontology (GO) - Biological Process for RPL7AP64 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP64 Gene

Drugs & Compounds for RPL7AP64 Gene

No Compound Related Data Available

Transcripts for RPL7AP64 Gene

mRNA/cDNA for RPL7AP64 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP64 Gene

No ASD Table

Relevant External Links for RPL7AP64 Gene

GeneLoc Exon Structure for
RPL7AP64
ECgene alternative splicing isoforms for
RPL7AP64

Expression for RPL7AP64 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP64 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7AP64 Gene

This gene is overexpressed in Whole Blood (x20.3) and Skin - Sun Exposed (Lower leg) (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP64 Gene:

RPL7AP64
genes like me logo Genes that share expression patterns with RPL7AP64: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP64 Gene

Orthologs for RPL7AP64 Gene

Evolution for RPL7AP64 Gene

ENSEMBL:
Gene Tree for RPL7AP64 (if available)
TreeFam:
Gene Tree for RPL7AP64 (if available)

No data available for Orthologs for RPL7AP64 Gene

Paralogs for RPL7AP64 Gene

No data available for Paralogs for RPL7AP64 Gene

Variants for RPL7AP64 Gene

Relevant External Links for RPL7AP64 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP64

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP64 Gene

Disorders for RPL7AP64 Gene

No disorders were found for RPL7AP64 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP64 Gene

Publications for RPL7AP64 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7AP64 Gene

Sources for RPL7AP64 Gene

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