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Aliases for RPL7AP64 Gene

Subcategory (RNA class) for RPL7AP64 Gene

lncRNA

Aliases for RPL7AP64 Gene

  • Ribosomal Protein L7a Pseudogene 64 2 3
  • RPL7A_29_1509 3
  • AC120057.1 5

External Ids for RPL7AP64 Gene

ORGUL Members for RPL7AP64 Gene

Previous GeneCards Identifiers for RPL7AP64 Gene

  • GC17U901175
  • GC17P007044

Summaries for RPL7AP64 Gene

GeneCards Summary for RPL7AP64 Gene

RPL7AP64 (Ribosomal Protein L7a Pseudogene 64) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL7AP64 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP64 Gene

Genomics for RPL7AP64 Gene

Regulatory Elements for RPL7AP64 Gene

Enhancers for RPL7AP64 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H007135 1.4 Ensembl ENCODE dbSUPER 12.2 -3.3 -3286 4 ELF3 ARID4B RAD21 RARA ZNF121 ZSCAN5C ZNF143 MIXL1 ZNF654 ZNF362 MIR324 SNORD10 DVL2 ENSG00000262089 KDM6B CNTROB SNORA48 WRAP53 SLC16A11 RPL7AP64
GH17H007130 1.9 FANTOM5 Ensembl ENCODE dbSUPER 8.8 -8.7 -8719 3 HDGF PKNOX1 ARID4B ZNF143 ZNF207 ATF7 RUNX3 JUNB REST ZNF592 CLEC10A SLC16A11 ASGR1 BCL6B EIF5A RPL7AP64 TRAPPC1 CD68 GABARAP SAT2
GH17H007113 1.5 Ensembl ENCODE dbSUPER 6.6 -26.2 -26162 3 HDGF FOXA2 MLX ARNT ARID4B YBX1 DMAP1 YY1 TCF12 ZNF207 DVL2 WRAP53 POLR2A NLGN2 CNTROB ELP5 SNORD10 ATP1B2 MIR324 SNORA48
GH17H007112 1.5 FANTOM5 Ensembl ENCODE dbSUPER 6 -28.4 -28393 0 ZFP69B ZNF121 TFAP4 SAP130 TEAD1 ZBTB48 ZNF692 YY1 ASGR2 RPL7AP64 ASGR1 XAF1 SLC13A5 CD68 GABARAP TNFSF12 EIF5A RNASEK
GH17H007141 0.6 ENCODE 0.7 +0.9 949 1 SMARCE1 PKNOX1 DPF2 ZNF217 GATA3 CTBP1 CUX1 TCF7L2 ASGR2 SLC16A11 ASGR1 DVL2 PHF23 GABARAP CLDN7 ENSG00000202251 RPL7AP64 GC17M007141
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP64 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP64 Gene

Chromosome:
17
Start:
7,140,930 bp from pter
End:
7,141,592 bp from pter
Size:
663 bases
Orientation:
Plus strand

Genomic View for RPL7AP64 Gene

Genes around RPL7AP64 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP64 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP64 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP64 Gene

Proteins for RPL7AP64 Gene

Post-translational modifications for RPL7AP64 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP64 Gene

Domains & Families for RPL7AP64 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP64 Gene

Function for RPL7AP64 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL7AP64
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP64 Gene

Localization for RPL7AP64 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP64 Gene

Pathways & Interactions for RPL7AP64 Gene

SuperPathways for RPL7AP64 Gene

No Data Available

Interacting Proteins for RPL7AP64 Gene

Gene Ontology (GO) - Biological Process for RPL7AP64 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP64 Gene

Drugs & Compounds for RPL7AP64 Gene

No Compound Related Data Available

Transcripts for RPL7AP64 Gene

mRNA/cDNA for RPL7AP64 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL7AP64
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP64 Gene

No ASD Table

Relevant External Links for RPL7AP64 Gene

GeneLoc Exon Structure for
RPL7AP64
ECgene alternative splicing isoforms for
RPL7AP64

Expression for RPL7AP64 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP64 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7AP64 Gene

This gene is overexpressed in Whole Blood (x20.3) and Skin - Sun Exposed (Lower leg) (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP64 Gene:

RPL7AP64
genes like me logo Genes that share expression patterns with RPL7AP64: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP64 Gene

Orthologs for RPL7AP64 Gene

Evolution for RPL7AP64 Gene

ENSEMBL:
Gene Tree for RPL7AP64 (if available)
TreeFam:
Gene Tree for RPL7AP64 (if available)

No data available for Orthologs for RPL7AP64 Gene

Paralogs for RPL7AP64 Gene

No data available for Paralogs for RPL7AP64 Gene

Variants for RPL7AP64 Gene

Relevant External Links for RPL7AP64 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP64

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP64 Gene

Disorders for RPL7AP64 Gene

No disorders were found for RPL7AP64 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP64 Gene

Publications for RPL7AP64 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL7AP64 Gene

Sources for RPL7AP64 Gene

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