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Aliases for RPL7AP62 Gene

Aliases for RPL7AP62 Gene

  • Ribosomal Protein L7a Pseudogene 62 2 3
  • RPL7A_28_1429 3
  • CTD-2270N23.1 5

External Ids for RPL7AP62 Gene

Previous GeneCards Identifiers for RPL7AP62 Gene

  • GC15M045812
  • GC15M048023

Summaries for RPL7AP62 Gene

GeneCards Summary for RPL7AP62 Gene

RPL7AP62 (Ribosomal Protein L7a Pseudogene 62) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP62 Gene

Genomics for RPL7AP62 Gene

Regulatory Elements for RPL7AP62 Gene

Enhancers for RPL7AP62 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G048330 1.1 ENCODE 11.2 -601.0 -601041 3.8 HDGF CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766 SLC12A1 LOC105370807 CEP152 RPL7AP62 FBN1 DUT ENSG00000259488 GC15P048420
GH15G047715 1.7 VISTA Ensembl ENCODE dbSUPER 0.4 +11.2 11196 8.6 PKNOX1 FEZF1 GLI4 ZNF2 GLIS2 SP3 ZNF488 MAFF SMARCA4 GLIS1 RPL7AP62 LOC105370804
GH15G047724 0.9 ENCODE dbSUPER 0.7 +4.8 4768 2.8 FOXA2 JUN OSR2 GATA2 GLIS1 FOS ZNF600 ZFX ZXDB ZBTB20 RPL7AP62 LOC105370804
GH15G047732 0.7 ENCODE dbSUPER 0.7 -2.5 -2490 1.1 CTCF RAD21 RPL7AP62 GC15P047767
GH15G047727 0.7 ENCODE 0.7 +3.1 3122 0.2 GFI1B CEBPB FEZF1 EP300 ZNF843 OSR2 PRDM6 ZNF341 MYNN ZSCAN5C RPL7AP62 LOC105370804
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP62 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP62 Gene

Chromosome:
15
Start:
47,730,083 bp from pter
End:
47,730,960 bp from pter
Size:
878 bases
Orientation:
Minus strand

Genomic View for RPL7AP62 Gene

Genes around RPL7AP62 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP62 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP62 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP62 Gene

Proteins for RPL7AP62 Gene

Post-translational modifications for RPL7AP62 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP62 Gene

Domains & Families for RPL7AP62 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP62 Gene

Function for RPL7AP62 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP62 Gene

Localization for RPL7AP62 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7AP62 Gene

Pathways & Interactions for RPL7AP62 Gene

SuperPathways for RPL7AP62 Gene

No Data Available

Interacting Proteins for RPL7AP62 Gene

Gene Ontology (GO) - Biological Process for RPL7AP62 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP62 Gene

Drugs & Compounds for RPL7AP62 Gene

No Compound Related Data Available

Transcripts for RPL7AP62 Gene

mRNA/cDNA for RPL7AP62 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP62 Gene

No ASD Table

Relevant External Links for RPL7AP62 Gene

GeneLoc Exon Structure for
RPL7AP62
ECgene alternative splicing isoforms for
RPL7AP62

Expression for RPL7AP62 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP62 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP62 Gene:

RPL7AP62
genes like me logo Genes that share expression patterns with RPL7AP62: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP62 Gene

Orthologs for RPL7AP62 Gene

Evolution for RPL7AP62 Gene

ENSEMBL:
Gene Tree for RPL7AP62 (if available)
TreeFam:
Gene Tree for RPL7AP62 (if available)

No data available for Orthologs for RPL7AP62 Gene

Paralogs for RPL7AP62 Gene

No data available for Paralogs for RPL7AP62 Gene

Variants for RPL7AP62 Gene

Relevant External Links for RPL7AP62 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP62

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP62 Gene

Disorders for RPL7AP62 Gene

Relevant External Links for RPL7AP62

Genetic Association Database (GAD)
RPL7AP62

No disorders were found for RPL7AP62 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7AP62 Gene

Publications for RPL7AP62 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genomewide association study of skin pigmentation in a South Asian population. (PMID: 17999355) Stokowski R.P. … Cox D.R. (Am. J. Hum. Genet. 2007) 46 64

Products for RPL7AP62 Gene

Sources for RPL7AP62 Gene

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